RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 WDR78Q5VTH9 848 aa13.74□□□□□ -0.21
COL4A3-205ENST00000471862 TICAM2Q86XR7 235 aa13.74□□□□□ -0.21
COL4A3-205ENST00000471862 REPS2Q8NFH8 660 aa13.74□□□□□ -0.21
COL4A3-205ENST00000471862 DIS3LQ8TF46 1054 aaKnown RBP13.74□□□□□ -0.21
COL4A3-205ENST00000471862 MKL1Q969V6 931 aa13.74□□□□□ -0.21
COL4A3-205ENST00000471862 RWDD1Q9H446 243 aaPredicted RBP13.74□□□□□ -0.21
COL4A3-205ENST00000471862 ZNF287Q9HBT7 754 aa13.74□□□□□ -0.21
COL4A3-205ENST00000471862 PPP1R9AQ9ULJ8 1098 aa13.74□□□□□ -0.21
COL4A3-205ENST00000471862 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.74□□□□□ -0.21
COL4A3-205ENST00000471862 IVNS1ABPQ9Y6Y0 642 aa13.74□□□□□ -0.21
COL4A3-205ENST00000471862 F5H6K3 240 aa13.73□□□□□ -0.21
COL4A3-205ENST00000471862 H0YGN5 161 aa13.73□□□□□ -0.21
COL4A3-205ENST00000471862 STRNO43815 780 aa13.73□□□□□ -0.21
COL4A3-205ENST00000471862 NDUFB10O96000 172 aa13.73□□□□□ -0.21
COL4A3-205ENST00000471862 ADORA2AP29274 412 aa13.73□□□□□ -0.21
COL4A3-205ENST00000471862 CCND3P30281 292 aaPredicted RBP13.73□□□□□ -0.21
COL4A3-205ENST00000471862 KLRC3Q07444 240 aa13.73□□□□□ -0.21
COL4A3-205ENST00000471862 VPS53Q5VIR6 699 aa13.73□□□□□ -0.21
COL4A3-205ENST00000471862 LHX8Q68G74 356 aa13.73□□□□□ -0.21
COL4A3-205ENST00000471862 ZNF444Q8N0Y2 327 aaPredicted RBP13.73□□□□□ -0.21
COL4A3-205ENST00000471862 NEDD1Q8NHV4 660 aa13.73□□□□□ -0.21
COL4A3-205ENST00000471862 CEP95Q96GE4 821 aa13.73□□□□□ -0.21
COL4A3-205ENST00000471862 PAWRQ96IZ0 340 aaKnown RBP13.73□□□□□ -0.21
COL4A3-205ENST00000471862 OSBPL3Q9H4L5 887 aa13.73□□□□□ -0.21
COL4A3-205ENST00000471862 MROH8Q9H579 483 aa13.73□□□□□ -0.21
COL4A3-205ENST00000471862 HELLSQ9NRZ9 838 aa13.73□□□□□ -0.21
COL4A3-205ENST00000471862 MTMR4Q9NYA4 1195 aa13.73□□□□□ -0.21
COL4A3-205ENST00000471862 ZNF214Q9UL59 606 aaPredicted RBP13.73□□□□□ -0.21
COL4A3-205ENST00000471862 SYNPO2Q9UMS6 1093 aa13.73□□□□□ -0.21
COL4A3-205ENST00000471862 PLXNA1Q9UIW2 1896 aa13.72□□□□□ -0.21
COL4A3-205ENST00000471862 A0A0D9SFI3 127 aa13.72□□□□□ -0.21
COL4A3-205ENST00000471862 VWA5AO00534 786 aa13.72□□□□□ -0.21
COL4A3-205ENST00000471862 COBLO75128 1261 aa13.72□□□□□ -0.21
COL4A3-205ENST00000471862 SLC25A27O95847 323 aa13.72□□□□□ -0.21
COL4A3-205ENST00000471862 NUCB1Q02818 461 aa13.72□□□□□ -0.21
COL4A3-205ENST00000471862 PDE4BQ07343 736 aa13.72□□□□□ -0.21
COL4A3-205ENST00000471862 ALX1Q15699 326 aa13.72□□□□□ -0.21
COL4A3-205ENST00000471862 HABP4Q5JVS0 413 aaKnown RBP13.72□□□□□ -0.21
COL4A3-205ENST00000471862 NECAB2Q7Z6G3 386 aa13.72□□□□□ -0.21
COL4A3-205ENST00000471862 CHD1LQ86WJ1 897 aa13.72□□□□□ -0.21
COL4A3-205ENST00000471862 PLEKHM2Q8IWE5 1019 aa13.72□□□□□ -0.21
COL4A3-205ENST00000471862 ABRAQ8N0Z2 381 aa13.72□□□□□ -0.21
COL4A3-205ENST00000471862 DPF3Q92784 378 aa13.72□□□□□ -0.21
COL4A3-205ENST00000471862 FAM227BQ96M60 508 aa13.72□□□□□ -0.21
COL4A3-205ENST00000471862 NUP88Q99567 741 aaPredicted RBP13.72□□□□□ -0.21
COL4A3-205ENST00000471862 CLIP2Q9UDT6 1046 aa13.72□□□□□ -0.21
COL4A3-205ENST00000471862 ANAPC4Q9UJX5 808 aa13.72□□□□□ -0.21
COL4A3-205ENST00000471862 TACC3Q9Y6A5 838 aa13.72□□□□□ -0.21
COL4A3-205ENST00000471862 TTLL1O95922 423 aa13.71□□□□□ -0.21
COL4A3-205ENST00000471862 PLS1Q14651 629 aa13.71□□□□□ -0.21
COL4A3-205ENST00000471862 MFSD14CQ5VZR4 134 aa13.71□□□□□ -0.21
COL4A3-205ENST00000471862 OLFML2BQ68BL8 750 aa13.71□□□□□ -0.21
COL4A3-205ENST00000471862 B4GALNT3Q6L9W6 998 aa13.71□□□□□ -0.21
COL4A3-205ENST00000471862 NCAPG2Q86XI2 1143 aa13.71□□□□□ -0.21
COL4A3-205ENST00000471862 RIOX2Q8IUF8 465 aa13.71□□□□□ -0.21
COL4A3-205ENST00000471862 GMCL1P1Q8NEA9 526 aa13.71□□□□□ -0.21
COL4A3-205ENST00000471862 SUPT16HQ9Y5B9 1047 aaKnown RBP13.71□□□□□ -0.21
COL4A3-205ENST00000471862 ZMYM6O95789 1325 aa13.7□□□□□ -0.22
COL4A3-205ENST00000471862 SLC3A2P08195 630 aaKnown RBP13.7□□□□□ -0.22
COL4A3-205ENST00000471862 FGRP09769 529 aa13.7□□□□□ -0.22
COL4A3-205ENST00000471862 TSPY3P0CV98 308 aa13.7□□□□□ -0.22
COL4A3-205ENST00000471862 TSPY8P0CW00 308 aa13.7□□□□□ -0.22
COL4A3-205ENST00000471862 CYBAP13498 195 aa13.7□□□□□ -0.22
COL4A3-205ENST00000471862 CYP2C19P33261 490 aa13.7□□□□□ -0.22
COL4A3-205ENST00000471862 STAT3P40763 770 aa13.7□□□□□ -0.22
COL4A3-205ENST00000471862 TFAP4Q01664 338 aa13.7□□□□□ -0.22
COL4A3-205ENST00000471862 CTDSPL2Q05D32 466 aa13.7□□□□□ -0.22
COL4A3-205ENST00000471862 MCMDC2Q4G0Z9 681 aa13.7□□□□□ -0.22
COL4A3-205ENST00000471862 FAM47AQ5JRC9 791 aa13.7□□□□□ -0.22
COL4A3-205ENST00000471862 SAMD1Q6SPF0 538 aaPredicted RBP13.7□□□□□ -0.22
COL4A3-205ENST00000471862 DPP9Q86TI2 863 aa13.7□□□□□ -0.22
COL4A3-205ENST00000471862 ZNF589Q86UQ0 364 aaPredicted RBP13.7□□□□□ -0.22
COL4A3-205ENST00000471862 LRRC47Q8N1G4 583 aaKnown RBP13.7□□□□□ -0.22
COL4A3-205ENST00000471862 TRPV1Q8NER1 839 aa13.7□□□□□ -0.22
COL4A3-205ENST00000471862 SLF1Q9BQI6 1058 aa13.7□□□□□ -0.22
COL4A3-205ENST00000471862 NBPF3Q9H094 633 aa13.7□□□□□ -0.22
COL4A3-205ENST00000471862 COLQQ9Y215 455 aaPredicted RBP13.7□□□□□ -0.22
COL4A3-205ENST00000471862 PFASO15067 1338 aa13.69□□□□□ -0.22
COL4A3-205ENST00000471862 RAD21O60216 631 aa13.69□□□□□ -0.22
COL4A3-205ENST00000471862 COL6A1P12109 1028 aa13.69□□□□□ -0.22
COL4A3-205ENST00000471862 COPB2P35606 906 aa13.69□□□□□ -0.22
COL4A3-205ENST00000471862 NOVP48745 357 aa13.69□□□□□ -0.22
COL4A3-205ENST00000471862 NMIQ13287 307 aaPredicted RBP13.69□□□□□ -0.22
COL4A3-205ENST00000471862 PRPF38AQ8NAV1 312 aaKnown RBP13.69□□□□□ -0.22
COL4A3-205ENST00000471862 PRO3102Q9H379 93 aa13.69□□□□□ -0.22
COL4A3-205ENST00000471862 C11orf49Q9H6J7 331 aa13.69□□□□□ -0.22
COL4A3-205ENST00000471862 INCENPQ9NQS7 918 aa13.69□□□□□ -0.22
COL4A3-205ENST00000471862 DDX20Q9UHI6 824 aaKnown RBP13.69□□□□□ -0.22
COL4A3-205ENST00000471862 NR2E3Q9Y5X4 410 aa13.69□□□□□ -0.22
COL4A3-205ENST00000471862 TRIOBPQ9H2D6 2365 aa13.68□□□□□ -0.22
COL4A3-205ENST00000471862 TRIM6-TRIM34B2RNG4 842 aa13.68□□□□□ -0.22
COL4A3-205ENST00000471862 ATP2A1O14983 1001 aa13.68□□□□□ -0.22
COL4A3-205ENST00000471862 ORC4O43929 436 aa13.68□□□□□ -0.22
COL4A3-205ENST00000471862 FGAP02671 866 aa13.68□□□□□ -0.22
COL4A3-205ENST00000471862 HSPD1P10809 573 aaKnown RBP13.68□□□□□ -0.22
COL4A3-205ENST00000471862 FCER1AP12319 257 aa13.68□□□□□ -0.22
COL4A3-205ENST00000471862 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.68□□□□□ -0.22
COL4A3-205ENST00000471862 MAML3Q96JK9 1138 aa13.68□□□□□ -0.22
COL4A3-205ENST00000471862 TEX13BQ9BXU2 312 aa13.68□□□□□ -0.22
COL4A3-205ENST00000471862 IL17RBQ9NRM6 502 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms