RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 PIK3AP1Q6ZUJ8 805 aa12.08□□□□□ -0.48
APLF-204ENST00000471727 TEX11Q8IYF3 940 aa12.08□□□□□ -0.48
APLF-204ENST00000471727 EPSTI1Q96J88 318 aa12.08□□□□□ -0.48
APLF-204ENST00000471727 MAD2L2Q9UI95 211 aa12.08□□□□□ -0.48
APLF-204ENST00000471727 GAKO14976 1311 aa12.07□□□□□ -0.48
APLF-204ENST00000471727 CCDC194A0A1B0GVG4 234 aa12.07□□□□□ -0.48
APLF-204ENST00000471727 VWA3AA6NCI4 1184 aa12.07□□□□□ -0.48
APLF-204ENST00000471727 FAM205CA6NFA0 338 aa12.07□□□□□ -0.48
APLF-204ENST00000471727 hCG_1984214I3L0E3 225 aa12.07□□□□□ -0.48
APLF-204ENST00000471727 ARHGAP6O43182 974 aa12.07□□□□□ -0.48
APLF-204ENST00000471727 RASA1P20936 1047 aa12.07□□□□□ -0.48
APLF-204ENST00000471727 PRPHP41219 470 aa12.07□□□□□ -0.48
APLF-204ENST00000471727 TBX2Q13207 712 aaPredicted RBP12.07□□□□□ -0.48
APLF-204ENST00000471727 FILIP1LQ4L180 1135 aa12.07□□□□□ -0.48
APLF-204ENST00000471727 SPECC1LQ69YQ0 1117 aa12.07□□□□□ -0.48
APLF-204ENST00000471727 USP49Q70CQ1 688 aa12.07□□□□□ -0.48
APLF-204ENST00000471727 SP8Q8IXZ3 490 aa12.07□□□□□ -0.48
APLF-204ENST00000471727 ZNF713Q8N859 430 aaPredicted RBP12.07□□□□□ -0.48
APLF-204ENST00000471727 LRRC4BQ9NT99 713 aa12.07□□□□□ -0.48
APLF-204ENST00000471727 BARHL2Q9NY43 387 aa12.07□□□□□ -0.48
APLF-204ENST00000471727 MYH6P13533 1939 aa12.07□□□□□ -0.48
APLF-204ENST00000471727 AFF2P51816 1311 aa12.07□□□□□ -0.48
APLF-204ENST00000471727 TNRC6CQ9HCJ0 1690 aaKnown RBP12.06□□□□□ -0.48
APLF-204ENST00000471727 STX10O60499 249 aa12.06□□□□□ -0.48
APLF-204ENST00000471727 GNA11P29992 359 aa12.06□□□□□ -0.48
APLF-204ENST00000471727 NOVP48745 357 aa12.06□□□□□ -0.48
APLF-204ENST00000471727 CDK8P49336 464 aa12.06□□□□□ -0.48
APLF-204ENST00000471727 SPAG1Q07617 926 aa12.06□□□□□ -0.48
APLF-204ENST00000471727 DIXDC1Q155Q3 683 aa12.06□□□□□ -0.48
APLF-204ENST00000471727 E2F4Q16254 413 aa12.06□□□□□ -0.48
APLF-204ENST00000471727 PPP4R3BQ5MIZ7 849 aa12.06□□□□□ -0.48
APLF-204ENST00000471727 E4F1Q66K89 784 aaPredicted RBP12.06□□□□□ -0.48
APLF-204ENST00000471727 ANKRD7Q92527 254 aa12.06□□□□□ -0.48
APLF-204ENST00000471727 DPF2Q92785 391 aa12.06□□□□□ -0.48
APLF-204ENST00000471727 DYNLL2Q96FJ2 89 aa12.06□□□□□ -0.48
APLF-204ENST00000471727 TMEM47Q9BQJ4 181 aa12.06□□□□□ -0.48
APLF-204ENST00000471727 COA1Q9GZY4 146 aa12.06□□□□□ -0.48
APLF-204ENST00000471727 MAGEF1Q9HAY2 307 aa12.06□□□□□ -0.48
APLF-204ENST00000471727 A0A1B0GTH6 734 aa12.05□□□□□ -0.48
APLF-204ENST00000471727 M0R2N6 131 aa12.05□□□□□ -0.48
APLF-204ENST00000471727 FMR1Q06787 632 aaKnown RBP eCLIP12.05□□□□□ -0.48
APLF-204ENST00000471727 CUL4BQ13620 913 aa12.05□□□□□ -0.48
APLF-204ENST00000471727 NR1I3Q14994 352 aa12.05□□□□□ -0.48
APLF-204ENST00000471727 FAM182BQ5T319 152 aa12.05□□□□□ -0.48
APLF-204ENST00000471727 DTHD1Q6ZMT9 781 aa12.05□□□□□ -0.48
APLF-204ENST00000471727 KRT25Q7Z3Z0 450 aa12.05□□□□□ -0.48
APLF-204ENST00000471727 MAPKAPK5Q8IW41 473 aa12.05□□□□□ -0.48
APLF-204ENST00000471727 C4orf32Q8N8J7 132 aa12.05□□□□□ -0.48
APLF-204ENST00000471727 TBC1D16Q8TBP0 767 aa12.05□□□□□ -0.48
APLF-204ENST00000471727 PPP1R13BQ96KQ4 1090 aa12.05□□□□□ -0.48
APLF-204ENST00000471727 AK8Q96MA6 479 aa12.05□□□□□ -0.48
APLF-204ENST00000471727 EYA3Q99504 573 aa12.05□□□□□ -0.48
APLF-204ENST00000471727 CUEDC2Q9H467 287 aa12.05□□□□□ -0.48
APLF-204ENST00000471727 C6orf50Q9HD87 102 aa12.05□□□□□ -0.48
APLF-204ENST00000471727 TRMT1Q9NXH9 659 aaKnown RBP12.05□□□□□ -0.48
APLF-204ENST00000471727 STX8Q9UNK0 236 aa12.05□□□□□ -0.48
APLF-204ENST00000471727 JAG2Q9Y219 1238 aa12.05□□□□□ -0.48
APLF-204ENST00000471727 A0A087X0B3 334 aa12.04□□□□□ -0.48
APLF-204ENST00000471727 USP17L3A6NCW0 530 aa12.04□□□□□ -0.48
APLF-204ENST00000471727 USP17L4A6NCW7 530 aa12.04□□□□□ -0.48
APLF-204ENST00000471727 USP27XA6NNY8 438 aa12.04□□□□□ -0.48
APLF-204ENST00000471727 KLRF2D3W0D1 207 aa12.04□□□□□ -0.48
APLF-204ENST00000471727 PARP1P09874 1014 aaKnown RBP12.04□□□□□ -0.48
APLF-204ENST00000471727 MCM7P33993 719 aa12.04□□□□□ -0.48
APLF-204ENST00000471727 AFMP43652 599 aa12.04□□□□□ -0.48
APLF-204ENST00000471727 EVX2Q03828 476 aa12.04□□□□□ -0.48
APLF-204ENST00000471727 MFSD14BQ5SR56 506 aa12.04□□□□□ -0.48
APLF-204ENST00000471727 USP17L1Q7RTZ2 530 aa12.04□□□□□ -0.48
APLF-204ENST00000471727 GRAMD1CQ8IYS0 662 aa12.04□□□□□ -0.48
APLF-204ENST00000471727 PDCL2Q8N4E4 241 aa12.04□□□□□ -0.48
APLF-204ENST00000471727 ANKRD20A12PQ8NF67 263 aa12.04□□□□□ -0.48
APLF-204ENST00000471727 RRP36Q96EU6 259 aaKnown RBP12.04□□□□□ -0.48
APLF-204ENST00000471727 ERO1AQ96HE7 468 aa12.04□□□□□ -0.48
APLF-204ENST00000471727 NAA15Q9BXJ9 866 aaKnown RBP12.04□□□□□ -0.48
APLF-204ENST00000471727 CCSER1Q9C0I3 900 aa12.04□□□□□ -0.48
APLF-204ENST00000471727 ZMYND12Q9H0C1 365 aa12.04□□□□□ -0.48
APLF-204ENST00000471727 MYO3BQ8WXR4 1341 aa12.04□□□□□ -0.48
APLF-204ENST00000471727 SYNRGQ9UMZ2 1314 aa12.04□□□□□ -0.48
APLF-204ENST00000471727 SBF2Q86WG5 1849 aa12.04□□□□□ -0.48
APLF-204ENST00000471727 PPP1R3GB7ZBB8 358 aa12.04□□□□□ -0.48
APLF-204ENST00000471727 STXBP3O00186 592 aa12.04□□□□□ -0.48
APLF-204ENST00000471727 HOXA7P31268 230 aaPredicted RBP12.04□□□□□ -0.48
APLF-204ENST00000471727 PPP1R2P41236 205 aa12.04□□□□□ -0.48
APLF-204ENST00000471727 RHBDL3P58872 404 aa12.04□□□□□ -0.48
APLF-204ENST00000471727 SOGA3Q5TF21 947 aa12.04□□□□□ -0.48
APLF-204ENST00000471727 ZNF658Q5TYW1 1059 aaPredicted RBP12.04□□□□□ -0.48
APLF-204ENST00000471727 CDKAL1Q5VV42 579 aa12.04□□□□□ -0.48
APLF-204ENST00000471727 PDXDC2PQ6P474 469 aa12.04□□□□□ -0.48
APLF-204ENST00000471727 STAG2Q8N3U4 1231 aa12.04□□□□□ -0.48
APLF-204ENST00000471727 ZNF592Q92610 1267 aa12.04□□□□□ -0.48
APLF-204ENST00000471727 SRRTQ9BXP5 876 aaKnown RBP12.04□□□□□ -0.48
APLF-204ENST00000471727 SEC63Q9UGP8 760 aaKnown RBP12.04□□□□□ -0.48
APLF-204ENST00000471727 RWDD2AQ9UIY3 292 aa12.04□□□□□ -0.48
APLF-204ENST00000471727 PCDHA6Q9UN73 950 aa12.04□□□□□ -0.48
APLF-204ENST00000471727 PCDHA8Q9Y5H6 950 aa12.04□□□□□ -0.48
APLF-204ENST00000471727 FLT1P17948 1338 aa12.03□□□□□ -0.48
APLF-204ENST00000471727 ESYT2A0FGR8 921 aa12.03□□□□□ -0.48
APLF-204ENST00000471727 LRRC10BA6NIK2 292 aa12.03□□□□□ -0.48
APLF-204ENST00000471727 POLRMTO00411 1230 aaKnown RBP12.03□□□□□ -0.48
APLF-204ENST00000471727 ETF1P62495 437 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms