RNA–Protein interactions for RNA: ENST00000471215.1

BUD23-215, Transcript of BUD23, rRNA methyltransferase and ribosome maturation factor, human

TSL 2

Gene BUD23, Length 3,886 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BUD23-215	ENST00000471215	MYH3	P11055	1940 aa		11.2	□□□□□ -0.62
BUD23-215	ENST00000471215	ZNF18	P17022	549 aa		11.2	□□□□□ -0.62
BUD23-215	ENST00000471215	UBXN1	Q04323	297 aa		11.2	□□□□□ -0.62
BUD23-215	ENST00000471215	SPAG1	Q07617	926 aa		11.2	□□□□□ -0.62
BUD23-215	ENST00000471215	SLC10A5	Q5PT55	438 aa		11.2	□□□□□ -0.62
BUD23-215	ENST00000471215	BARGIN	Q6ZT62	677 aa		11.2	□□□□□ -0.62
BUD23-215	ENST00000471215	LRRN4CL	Q8ND94	238 aa		11.2	□□□□□ -0.62
BUD23-215	ENST00000471215	ARHGEF1	Q92888	912 aa	Known RBP	11.2	□□□□□ -0.62
BUD23-215	ENST00000471215	C6orf229	H3BNL8	230 aa		11.2	□□□□□ -0.62
BUD23-215	ENST00000471215	GTPBP6	O43824	516 aa	Predicted RBP	11.2	□□□□□ -0.62
BUD23-215	ENST00000471215	DPYD	Q12882	1025 aa		11.2	□□□□□ -0.62
BUD23-215	ENST00000471215	LETM2	Q2VYF4	491 aa		11.2	□□□□□ -0.62
BUD23-215	ENST00000471215	CCDC178	Q5BJE1	867 aa		11.2	□□□□□ -0.62
BUD23-215	ENST00000471215	WWC2	Q6AWC2	1192 aa		11.2	□□□□□ -0.62
BUD23-215	ENST00000471215	CNGA4	Q8IV77	575 aa		11.2	□□□□□ -0.62
BUD23-215	ENST00000471215	SHISA4	Q96DD7	197 aa		11.2	□□□□□ -0.62
BUD23-215	ENST00000471215	RPN1	P04843	607 aa	Known RBP	11.19	□□□□□ -0.62
BUD23-215	ENST00000471215	PPP2R3A	Q06190	1150 aa		11.19	□□□□□ -0.62
BUD23-215	ENST00000471215	ZNF569	Q5MCW4	686 aa		11.19	□□□□□ -0.62
BUD23-215	ENST00000471215	TEX11	Q8IYF3	940 aa		11.19	□□□□□ -0.62
BUD23-215	ENST00000471215	TRIM47	Q96LD4	638 aa		11.19	□□□□□ -0.62
BUD23-215	ENST00000471215	CPVL	Q9H3G5	476 aa		11.19	□□□□□ -0.62
BUD23-215	ENST00000471215	L2HGDH	Q9H9P8	463 aa		11.19	□□□□□ -0.62
BUD23-215	ENST00000471215	PCDHA4	Q9UN74	947 aa		11.19	□□□□□ -0.62
BUD23-215	ENST00000471215	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	11.19	□□□□□ -0.62
BUD23-215	ENST00000471215	MYH15	Q9Y2K3	1946 aa		11.19	□□□□□ -0.62
BUD23-215	ENST00000471215	XIRP1	Q702N8	1843 aa	Known RBP	11.19	□□□□□ -0.62
BUD23-215	ENST00000471215	SHANK3	Q9BYB0	1731 aa		11.19	□□□□□ -0.62
BUD23-215	ENST00000471215		G3V3G9	751 aa		11.19	□□□□□ -0.62
BUD23-215	ENST00000471215	UFL1	O94874	794 aa		11.19	□□□□□ -0.62
BUD23-215	ENST00000471215	ATP2B2	Q01814	1243 aa		11.19	□□□□□ -0.62
BUD23-215	ENST00000471215	DCAF8	Q5TAQ9	597 aa		11.19	□□□□□ -0.62
BUD23-215	ENST00000471215	WDR24	Q96S15	920 aa		11.19	□□□□□ -0.62
BUD23-215	ENST00000471215	NID2	Q14112	1375 aa		11.19	□□□□□ -0.62
BUD23-215	ENST00000471215		A0A1B0GTH6	734 aa		11.19	□□□□□ -0.62
BUD23-215	ENST00000471215	TOM1	O60784	492 aa		11.19	□□□□□ -0.62
BUD23-215	ENST00000471215	DGKH	Q86XP1	1220 aa		11.19	□□□□□ -0.62
BUD23-215	ENST00000471215	EEF2KMT	Q96G04	330 aa		11.19	□□□□□ -0.62
BUD23-215	ENST00000471215	GTPBP4	Q9BZE4	634 aa	Known RBP	11.19	□□□□□ -0.62
BUD23-215	ENST00000471215	GDA	Q9Y2T3	454 aa		11.19	□□□□□ -0.62
BUD23-215	ENST00000471215	KLRF2	D3W0D1	207 aa		11.18	□□□□□ -0.62
BUD23-215	ENST00000471215	LONP1	P36776	959 aa	Known RBP	11.18	□□□□□ -0.62
BUD23-215	ENST00000471215	SBK1	Q52WX2	424 aa		11.18	□□□□□ -0.62
BUD23-215	ENST00000471215	C12orf60	Q5U649	245 aa		11.18	□□□□□ -0.62
BUD23-215	ENST00000471215	PUF60	Q9UHX1	559 aa	Known RBP	11.18	□□□□□ -0.62
BUD23-215	ENST00000471215	KCNJ18	B7U540	433 aa		11.18	□□□□□ -0.62
BUD23-215	ENST00000471215	KCNJ12	Q14500	433 aa		11.18	□□□□□ -0.62
BUD23-215	ENST00000471215	CT47A1	Q5JQC4	288 aa	Predicted RBP	11.18	□□□□□ -0.62
BUD23-215	ENST00000471215	TRIM65	Q6PJ69	517 aa		11.18	□□□□□ -0.62
BUD23-215	ENST00000471215	IRX2	Q9BZI1	471 aa	Predicted RBP	11.18	□□□□□ -0.62
BUD23-215	ENST00000471215	PP2D1	A8MPX8	630 aa		11.18	□□□□□ -0.62
BUD23-215	ENST00000471215	PPP1R3G	B7ZBB8	358 aa		11.18	□□□□□ -0.62
BUD23-215	ENST00000471215		F8W031	263 aa	Predicted RBP	11.18	□□□□□ -0.62
BUD23-215	ENST00000471215	IPO7	O95373	1038 aa	Known RBP	11.18	□□□□□ -0.62
BUD23-215	ENST00000471215	PARP1	P09874	1014 aa	Known RBP	11.18	□□□□□ -0.62
BUD23-215	ENST00000471215	KRT9	P35527	623 aa		11.18	□□□□□ -0.62
BUD23-215	ENST00000471215	KRT31	Q15323	416 aa		11.18	□□□□□ -0.62
BUD23-215	ENST00000471215	CDK5RAP3	Q96JB5	506 aa		11.18	□□□□□ -0.62
BUD23-215	ENST00000471215	EYA3	Q99504	573 aa		11.18	□□□□□ -0.62
BUD23-215	ENST00000471215	EPC1	Q9H2F5	836 aa		11.18	□□□□□ -0.62
BUD23-215	ENST00000471215	SLIT2	O94813	1529 aa		11.18	□□□□□ -0.62
BUD23-215	ENST00000471215	PSMA7	O14818	248 aa		11.17	□□□□□ -0.62
BUD23-215	ENST00000471215	CCNT1	O60563	726 aa	Known RBP	11.17	□□□□□ -0.62
BUD23-215	ENST00000471215	BTD	P43251	543 aa		11.17	□□□□□ -0.62
BUD23-215	ENST00000471215	CLCN6	P51797	869 aa		11.17	□□□□□ -0.62
BUD23-215	ENST00000471215	COPB1	P53618	953 aa	Known RBP	11.17	□□□□□ -0.62
BUD23-215	ENST00000471215	TBX2	Q13207	712 aa	Predicted RBP	11.17	□□□□□ -0.62
BUD23-215	ENST00000471215	PICALM	Q13492	652 aa		11.17	□□□□□ -0.62
BUD23-215	ENST00000471215	MED15	Q96RN5	788 aa		11.17	□□□□□ -0.62
BUD23-215	ENST00000471215	ADD3	Q9UEY8	706 aa	Known RBP	11.17	□□□□□ -0.62
BUD23-215	ENST00000471215	LEMD3	Q9Y2U8	911 aa		11.17	□□□□□ -0.62
BUD23-215	ENST00000471215	COL14A1	Q05707	1796 aa	Known RBP	11.17	□□□□□ -0.62
BUD23-215	ENST00000471215	ZSCAN20	P17040	1043 aa	Predicted RBP	11.17	□□□□□ -0.62
BUD23-215	ENST00000471215	NFIX	Q14938	502 aa		11.17	□□□□□ -0.62
BUD23-215	ENST00000471215	MEX3C	Q5U5Q3	659 aa	Known RBP	11.17	□□□□□ -0.62
BUD23-215	ENST00000471215	FAM196A	Q6ZSG2	479 aa		11.17	□□□□□ -0.62
BUD23-215	ENST00000471215	RRP36	Q96EU6	259 aa	Known RBP	11.17	□□□□□ -0.62
BUD23-215	ENST00000471215	PANX2	Q96RD6	677 aa		11.17	□□□□□ -0.62
BUD23-215	ENST00000471215	C6orf50	Q9HD87	102 aa		11.17	□□□□□ -0.62
BUD23-215	ENST00000471215	C4A	P0C0L4	1744 aa		11.17	□□□□□ -0.62
BUD23-215	ENST00000471215	C4B	P0C0L5	1744 aa		11.17	□□□□□ -0.62
BUD23-215	ENST00000471215	EFCAB8	A8MWE9	144 aa		11.17	□□□□□ -0.62
BUD23-215	ENST00000471215	POLR3G	O15318	223 aa	Predicted RBP	11.17	□□□□□ -0.62
BUD23-215	ENST00000471215	DMTN	Q08495	405 aa		11.17	□□□□□ -0.62
BUD23-215	ENST00000471215	ZNF658	Q5TYW1	1059 aa	Predicted RBP	11.17	□□□□□ -0.62
BUD23-215	ENST00000471215	JAKMIP3	Q5VZ66	844 aa		11.17	□□□□□ -0.62
BUD23-215	ENST00000471215	ARL6IP4	Q66PJ3	421 aa	Known RBP	11.17	□□□□□ -0.62
BUD23-215	ENST00000471215	TMEM47	Q9BQJ4	181 aa		11.17	□□□□□ -0.62
BUD23-215	ENST00000471215	NAA15	Q9BXJ9	866 aa	Known RBP	11.17	□□□□□ -0.62
BUD23-215	ENST00000471215	PODXL2	Q9NZ53	605 aa		11.17	□□□□□ -0.62
BUD23-215	ENST00000471215	XDH	P47989	1333 aa		11.17	□□□□□ -0.62
BUD23-215	ENST00000471215	COL1A1	P02452	1464 aa	Predicted RBP	11.17	□□□□□ -0.62
BUD23-215	ENST00000471215	SMCO2	A6NFE2	343 aa		11.16	□□□□□ -0.62
BUD23-215	ENST00000471215	FGR	P09769	529 aa		11.16	□□□□□ -0.62
BUD23-215	ENST00000471215	ASIC1	P78348	528 aa		11.16	□□□□□ -0.62
BUD23-215	ENST00000471215	GRAP	Q13588	217 aa		11.16	□□□□□ -0.62
BUD23-215	ENST00000471215	USP17L2	Q6R6M4	530 aa		11.16	□□□□□ -0.62
BUD23-215	ENST00000471215	SPATA20	Q8TB22	786 aa		11.16	□□□□□ -0.62
BUD23-215	ENST00000471215	GRAPL	Q8TC17	118 aa	Predicted RBP	11.16	□□□□□ -0.62
BUD23-215	ENST00000471215	IL17RB	Q9NRM6	502 aa		11.16	□□□□□ -0.62

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