RNA–Protein interactions for RNA: ENST00000471039.1

SCNM1-205, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-205ENST00000471039 PAGR1Q9BTK6 254 aa14.6□□□□□ -0.07
SCNM1-205ENST00000471039 FBXO28Q9NVF7 368 aa14.6□□□□□ -0.07
SCNM1-205ENST00000471039 ZSWIM5Q9P217 1185 aa14.6□□□□□ -0.07
SCNM1-205ENST00000471039 TRIM17Q9Y577 477 aa14.6□□□□□ -0.07
SCNM1-205ENST00000471039 LCTP09848 1927 aa14.59□□□□□ -0.07
SCNM1-205ENST00000471039 ECM2O94769 699 aaPredicted RBP14.59□□□□□ -0.07
SCNM1-205ENST00000471039 REC8O95072 547 aa14.59□□□□□ -0.07
SCNM1-205ENST00000471039 ERVK-9P63128 1117 aa14.59□□□□□ -0.07
SCNM1-205ENST00000471039 ERVK-24P63145 666 aa14.59□□□□□ -0.07
SCNM1-205ENST00000471039 COG2Q14746 738 aa14.59□□□□□ -0.07
SCNM1-205ENST00000471039 MB21D2Q8IYB1 491 aaPredicted RBP14.59□□□□□ -0.07
SCNM1-205ENST00000471039 ENAHQ8N8S7 591 aaPredicted RBP14.59□□□□□ -0.07
SCNM1-205ENST00000471039 ATG4CQ96DT6 458 aa14.59□□□□□ -0.07
SCNM1-205ENST00000471039 TRIM47Q96LD4 638 aa14.59□□□□□ -0.07
SCNM1-205ENST00000471039 ZSCAN10Q96SZ4 725 aaPredicted RBP14.59□□□□□ -0.07
SCNM1-205ENST00000471039 UBAC1Q9BSL1 405 aa14.59□□□□□ -0.07
SCNM1-205ENST00000471039 RBPJLQ9UBG7 517 aa14.59□□□□□ -0.07
SCNM1-205ENST00000471039 PPP1R9AQ9ULJ8 1098 aa14.59□□□□□ -0.07
SCNM1-205ENST00000471039 RABGAP1Q9Y3P9 1069 aa14.59□□□□□ -0.07
SCNM1-205ENST00000471039 FRMPD3Q5JV73 1810 aa14.59□□□□□ -0.07
SCNM1-205ENST00000471039 BMP3P12645 472 aa14.58□□□□□ -0.08
SCNM1-205ENST00000471039 DSG3P32926 999 aa14.58□□□□□ -0.08
SCNM1-205ENST00000471039 PSMC4P43686 418 aa14.58□□□□□ -0.08
SCNM1-205ENST00000471039 FCGRTP55899 365 aa14.58□□□□□ -0.08
SCNM1-205ENST00000471039 CCDC178Q5BJE1 867 aa14.58□□□□□ -0.08
SCNM1-205ENST00000471039 RNF20Q5VTR2 975 aa14.58□□□□□ -0.08
SCNM1-205ENST00000471039 SAMD1Q6SPF0 538 aaPredicted RBP14.58□□□□□ -0.08
SCNM1-205ENST00000471039 DGKHQ86XP1 1220 aa14.58□□□□□ -0.08
SCNM1-205ENST00000471039 TTC14Q96N46 770 aa14.58□□□□□ -0.08
SCNM1-205ENST00000471039 MCOLN1Q9GZU1 580 aa14.58□□□□□ -0.08
SCNM1-205ENST00000471039 EFCC1Q9HA90 598 aa14.58□□□□□ -0.08
SCNM1-205ENST00000471039 BTBD7Q9P203 1132 aa14.58□□□□□ -0.08
SCNM1-205ENST00000471039 PDHBP11177 359 aa14.57□□□□□ -0.08
SCNM1-205ENST00000471039 SLC1A4P43007 532 aa14.57□□□□□ -0.08
SCNM1-205ENST00000471039 ANTXR2P58335 489 aa14.57□□□□□ -0.08
SCNM1-205ENST00000471039 COL9A3Q14050 684 aaPredicted RBP14.57□□□□□ -0.08
SCNM1-205ENST00000471039 SEC23AQ15436 765 aa14.57□□□□□ -0.08
SCNM1-205ENST00000471039 CCDC96Q2M329 555 aa14.57□□□□□ -0.08
SCNM1-205ENST00000471039 TNS4Q8IZW8 715 aa14.57□□□□□ -0.08
SCNM1-205ENST00000471039 MB21D1Q8N884 522 aa14.57□□□□□ -0.08
SCNM1-205ENST00000471039 GPRC5AQ8NFJ5 357 aa14.57□□□□□ -0.08
SCNM1-205ENST00000471039 DCAF4Q8WV16 495 aa14.57□□□□□ -0.08
SCNM1-205ENST00000471039 CHMP4CQ96CF2 233 aa14.57□□□□□ -0.08
SCNM1-205ENST00000471039 SLF1Q9BQI6 1058 aa14.57□□□□□ -0.08
SCNM1-205ENST00000471039 ISY1Q9ULR0 285 aaKnown RBP14.57□□□□□ -0.08
SCNM1-205ENST00000471039 MTMR7Q9Y216 660 aa14.57□□□□□ -0.08
SCNM1-205ENST00000471039 SMCHD1A6NHR9 2005 aa14.57□□□□□ -0.08
SCNM1-205ENST00000471039 LRRC37A2A6NM11 1700 aa14.56□□□□□ -0.08
SCNM1-205ENST00000471039 TNPO2O14787 897 aaKnown RBP14.56□□□□□ -0.08
SCNM1-205ENST00000471039 GNRH1P01148 92 aa14.56□□□□□ -0.08
SCNM1-205ENST00000471039 MCCP23508 829 aa14.56□□□□□ -0.08
SCNM1-205ENST00000471039 STAT2P52630 851 aa14.56□□□□□ -0.08
SCNM1-205ENST00000471039 ARHGEF6Q15052 776 aa14.56□□□□□ -0.08
SCNM1-205ENST00000471039 PKN2Q16513 984 aaKnown RBP14.56□□□□□ -0.08
SCNM1-205ENST00000471039 IFIT1BQ5T764 474 aaKnown RBP14.56□□□□□ -0.08
SCNM1-205ENST00000471039 FBXO46Q6PJ61 603 aaPredicted RBP14.56□□□□□ -0.08
SCNM1-205ENST00000471039 KCTD1Q719H9 257 aa14.56□□□□□ -0.08
SCNM1-205ENST00000471039 PNMA1Q8ND90 353 aa14.56□□□□□ -0.08
SCNM1-205ENST00000471039 REPS2Q8NFH8 660 aa14.56□□□□□ -0.08
SCNM1-205ENST00000471039 ANKS1AQ92625 1134 aa14.56□□□□□ -0.08
SCNM1-205ENST00000471039 PORCNQ9H237 461 aa14.56□□□□□ -0.08
SCNM1-205ENST00000471039 HOXC10Q9NYD6 342 aa14.56□□□□□ -0.08
SCNM1-205ENST00000471039 FEM1BQ9UK73 627 aa14.56□□□□□ -0.08
SCNM1-205ENST00000471039 ADAMTS5Q9UNA0 930 aa14.56□□□□□ -0.08
SCNM1-205ENST00000471039 TMEM232C9JQI7 657 aa14.55□□□□□ -0.08
SCNM1-205ENST00000471039 VWA5AO00534 786 aa14.55□□□□□ -0.08
SCNM1-205ENST00000471039 EPB41L2O43491 1005 aaKnown RBP14.55□□□□□ -0.08
SCNM1-205ENST00000471039 FMNL1O95466 1100 aaPredicted RBP14.55□□□□□ -0.08
SCNM1-205ENST00000471039 SNHG28P0DPA3 235 aa14.55□□□□□ -0.08
SCNM1-205ENST00000471039 HSPA4P34932 840 aa14.55□□□□□ -0.08
SCNM1-205ENST00000471039 Q3C1V9 767 aa14.55□□□□□ -0.08
SCNM1-205ENST00000471039 CHST3Q7LGC8 479 aa14.55□□□□□ -0.08
SCNM1-205ENST00000471039 RASEFQ8IZ41 740 aa14.55□□□□□ -0.08
SCNM1-205ENST00000471039 SPATC1LQ9H0A9 340 aa14.55□□□□□ -0.08
SCNM1-205ENST00000471039 KAT14Q9H8E8 782 aa14.55□□□□□ -0.08
SCNM1-205ENST00000471039 SRRDQ9UH36 339 aa14.55□□□□□ -0.08
SCNM1-205ENST00000471039 ZNF214Q9UL59 606 aaPredicted RBP14.55□□□□□ -0.08
SCNM1-205ENST00000471039 PTPN22Q9Y2R2 807 aa14.55□□□□□ -0.08
SCNM1-205ENST00000471039 FRMPD2Q68DX3 1309 aaPredicted RBP14.55□□□□□ -0.08
SCNM1-205ENST00000471039 IFIT3O14879 490 aaKnown RBP14.54□□□□□ -0.08
SCNM1-205ENST00000471039 PRC1O43663 620 aa14.54□□□□□ -0.08
SCNM1-205ENST00000471039 PLA2G6O60733 806 aa14.54□□□□□ -0.08
SCNM1-205ENST00000471039 MAPK4P31152 587 aa14.54□□□□□ -0.08
SCNM1-205ENST00000471039 CCNA1P78396 465 aa14.54□□□□□ -0.08
SCNM1-205ENST00000471039 PRKCZQ05513 592 aa14.54□□□□□ -0.08
SCNM1-205ENST00000471039 ZNF543Q08ER8 600 aa14.54□□□□□ -0.08
SCNM1-205ENST00000471039 IKQ13123 557 aaPredicted RBP14.54□□□□□ -0.08
SCNM1-205ENST00000471039 TMEM132BQ14DG7 1078 aa14.54□□□□□ -0.08
SCNM1-205ENST00000471039 SART3Q15020 963 aaKnown RBP14.54□□□□□ -0.08
SCNM1-205ENST00000471039 ADCK5Q3MIX3 580 aa14.54□□□□□ -0.08
SCNM1-205ENST00000471039 TSGA10IPQ3SY00 556 aa14.54□□□□□ -0.08
SCNM1-205ENST00000471039 FAM160B2Q86V87 743 aa14.54□□□□□ -0.08
SCNM1-205ENST00000471039 PRPF38AQ8NAV1 312 aaKnown RBP14.54□□□□□ -0.08
SCNM1-205ENST00000471039 KCNB2Q92953 911 aa14.54□□□□□ -0.08
SCNM1-205ENST00000471039 KIFC2Q96AC6 838 aa14.54□□□□□ -0.08
SCNM1-205ENST00000471039 GABRQQ9UN88 632 aa14.54□□□□□ -0.08
SCNM1-205ENST00000471039 PTCH2Q9Y6C5 1203 aa14.54□□□□□ -0.08
SCNM1-205ENST00000471039 ERICH2A1L162 156 aa14.53□□□□□ -0.08
SCNM1-205ENST00000471039 ZKSCAN1P17029 563 aaPredicted RBP14.53□□□□□ -0.08
SCNM1-205ENST00000471039 MCM5P33992 734 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms