RNA–Protein interactions for RNA: ENST00000470399.1

TTC19-204, Transcript of tetratricopeptide repeat domain 19, humanhuman

TSL 5

Gene TTC19, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC19-204ENST00000470399 ATP5JP18859 108 aa29.55■■■□□ 2.32
TTC19-204ENST00000470399 LRRC41Q15345 812 aa29.55■■■□□ 2.32
TTC19-204ENST00000470399 TRIM60Q495X7 471 aa29.55■■■□□ 2.32
TTC19-204ENST00000470399 C16orf86Q6ZW13 317 aa29.55■■■□□ 2.32
TTC19-204ENST00000470399 EYSQ5T1H1 3165 aa29.55■■■□□ 2.32
TTC19-204ENST00000470399 MCM3APO60318 1980 aa29.54■■■□□ 2.32
TTC19-204ENST00000470399 USP17L12C9JPN9 530 aa29.54■■■□□ 2.32
TTC19-204ENST00000470399 USP17L21D6R901 530 aa29.54■■■□□ 2.32
TTC19-204ENST00000470399 C9orf50Q5SZB4 431 aa29.54■■■□□ 2.32
TTC19-204ENST00000470399 SAMD1Q6SPF0 538 aaPredicted RBP29.54■■■□□ 2.32
TTC19-204ENST00000470399 SH3RF1Q7Z6J0 888 aa29.54■■■□□ 2.32
TTC19-204ENST00000470399 HAUS7Q99871 368 aa29.54■■■□□ 2.32
TTC19-204ENST00000470399 CDH23Q9H251 3354 aa29.54■■■□□ 2.32
TTC19-204ENST00000470399 KBTBD13C9JR72 458 aa29.53■■■□□ 2.32
TTC19-204ENST00000470399 EEF2P13639 858 aaKnown RBP29.53■■■□□ 2.32
TTC19-204ENST00000470399 ADCYAP1R1P41586 468 aa29.53■■■□□ 2.32
TTC19-204ENST00000470399 CCDC17Q96LX7 622 aa29.53■■■□□ 2.32
TTC19-204ENST00000470399 FAM161BQ96MY7 647 aa29.53■■■□□ 2.32
TTC19-204ENST00000470399 PDLIM7Q9NR12 457 aa29.53■■■□□ 2.32
TTC19-204ENST00000470399 RAB11FIP3O75154 756 aa29.52■■■□□ 2.32
TTC19-204ENST00000470399 SHHQ15465 462 aa29.52■■■□□ 2.32
TTC19-204ENST00000470399 REPS2Q8NFH8 660 aa29.52■■■□□ 2.32
TTC19-204ENST00000470399 FERMT2Q96AC1 680 aa29.52■■■□□ 2.32
TTC19-204ENST00000470399 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.52■■■□□ 2.32
TTC19-204ENST00000470399 TRIM43BA6NCK2 446 aa29.51■■■□□ 2.31
TTC19-204ENST00000470399 PGK2P07205 417 aa29.51■■■□□ 2.31
TTC19-204ENST00000470399 TAL1P17542 331 aaPredicted RBP29.51■■■□□ 2.31
TTC19-204ENST00000470399 CTR9Q6PD62 1173 aa29.51■■■□□ 2.31
TTC19-204ENST00000470399 TRIM43Q96BQ3 446 aaPredicted RBP29.51■■■□□ 2.31
TTC19-204ENST00000470399 PUS7LQ9H0K6 701 aaKnown RBP29.51■■■□□ 2.31
TTC19-204ENST00000470399 SH2D4AQ9H788 454 aa29.51■■■□□ 2.31
TTC19-204ENST00000470399 PRKAG2Q9UGJ0 569 aa29.51■■■□□ 2.31
TTC19-204ENST00000470399 HMMRO75330 724 aa29.5■■■□□ 2.31
TTC19-204ENST00000470399 MYCNP04198 464 aaPredicted RBP29.5■■■□□ 2.31
TTC19-204ENST00000470399 FCER1AP12319 257 aa29.5■■■□□ 2.31
TTC19-204ENST00000470399 UBE3CQ15386 1083 aa29.5■■■□□ 2.31
TTC19-204ENST00000470399 DIEXFQ68CQ4 756 aaKnown RBP29.5■■■□□ 2.31
TTC19-204ENST00000470399 RIOX2Q8IUF8 465 aa29.5■■■□□ 2.31
TTC19-204ENST00000470399 BADQ92934 168 aa29.5■■■□□ 2.31
TTC19-204ENST00000470399 PRDM5Q9NQX1 630 aaPredicted RBP29.5■■■□□ 2.31
TTC19-204ENST00000470399 SLC5A4Q9NY91 659 aa29.5■■■□□ 2.31
TTC19-204ENST00000470399 ZNF214Q9UL59 606 aaPredicted RBP29.5■■■□□ 2.31
TTC19-204ENST00000470399 DDX19BQ9UMR2 479 aa29.5■■■□□ 2.31
TTC19-204ENST00000470399 SLC25A27O95847 323 aa29.49■■■□□ 2.31
TTC19-204ENST00000470399 ITGB8P26012 769 aa29.49■■■□□ 2.31
TTC19-204ENST00000470399 ZNF792Q3KQV3 632 aa29.49■■■□□ 2.31
TTC19-204ENST00000470399 C1orf53Q5VUE5 145 aa29.49■■■□□ 2.31
TTC19-204ENST00000470399 VWA5AO00534 786 aa29.48■■■□□ 2.31
TTC19-204ENST00000470399 MMP19Q99542 508 aa29.48■■■□□ 2.31
TTC19-204ENST00000470399 PPP1R9AQ9ULJ8 1098 aa29.48■■■□□ 2.31
TTC19-204ENST00000470399 PHF24Q9UPV7 400 aa29.48■■■□□ 2.31
TTC19-204ENST00000470399 SLC4A4Q9Y6R1 1079 aa29.48■■■□□ 2.31
TTC19-204ENST00000470399 ROBO3Q96MS0 1386 aa29.48■■■□□ 2.31
TTC19-204ENST00000470399 FAM83BQ5T0W9 1011 aa29.47■■■□□ 2.31
TTC19-204ENST00000470399 LENG1Q96BZ8 264 aaPredicted RBP29.47■■■□□ 2.31
TTC19-204ENST00000470399 TINF2Q9BSI4 451 aa29.47■■■□□ 2.31
TTC19-204ENST00000470399 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.47■■■□□ 2.31
TTC19-204ENST00000470399 KANSL2Q9H9L4 492 aa29.47■■■□□ 2.31
TTC19-204ENST00000470399 ZNF865P0CJ78 1059 aaPredicted RBP29.46■■■□□ 2.31
TTC19-204ENST00000470399 SMARCA5O60264 1052 aaPredicted RBP29.45■■■□□ 2.31
TTC19-204ENST00000470399 PGK1P00558 417 aa29.45■■■□□ 2.31
TTC19-204ENST00000470399 MS4A1P11836 297 aa29.45■■■□□ 2.31
TTC19-204ENST00000470399 STAT3P40763 770 aa29.45■■■□□ 2.31
TTC19-204ENST00000470399 TLE2Q04725 743 aa29.45■■■□□ 2.31
TTC19-204ENST00000470399 COL25A1Q9BXS0 654 aaPredicted RBP29.45■■■□□ 2.31
TTC19-204ENST00000470399 XPNPEP3Q9NQH7 507 aa29.45■■■□□ 2.31
TTC19-204ENST00000470399 NRBP1Q9UHY1 535 aa29.45■■■□□ 2.31
TTC19-204ENST00000470399 VCANP13611 3396 aa29.45■■■□□ 2.3
TTC19-204ENST00000470399 ZNF697Q5TEC3 545 aa29.44■■■□□ 2.3
TTC19-204ENST00000470399 NUP88Q99567 741 aaPredicted RBP29.44■■■□□ 2.3
TTC19-204ENST00000470399 PRUNE2Q8WUY3 3088 aa29.43■■■□□ 2.3
TTC19-204ENST00000470399 PHF6Q8IWS0 365 aaKnown RBP eCLIP29.43■■■□□ 2.3
TTC19-204ENST00000470399 DIS3Q9Y2L1 958 aaKnown RBP29.43■■■□□ 2.3
TTC19-204ENST00000470399 SPTBN5Q9NRC6 3674 aaKnown RBP29.43■■■□□ 2.3
TTC19-204ENST00000470399 ADAMTS4O75173 837 aa29.42■■■□□ 2.3
TTC19-204ENST00000470399 RARBP10826 455 aa29.42■■■□□ 2.3
TTC19-204ENST00000470399 RASA1P20936 1047 aa29.42■■■□□ 2.3
TTC19-204ENST00000470399 EPHB4P54760 987 aa29.42■■■□□ 2.3
TTC19-204ENST00000470399 KCTD2Q14681 263 aa29.42■■■□□ 2.3
TTC19-204ENST00000470399 STRBPQ96SI9 672 aaKnown RBP29.42■■■□□ 2.3
TTC19-204ENST00000470399 CDX2Q99626 313 aaPredicted RBP29.42■■■□□ 2.3
TTC19-204ENST00000470399 TTYH1Q9H313 450 aaPredicted RBP29.42■■■□□ 2.3
TTC19-204ENST00000470399 GOPCQ9HD26 462 aa29.42■■■□□ 2.3
TTC19-204ENST00000470399 AMOTL1Q8IY63 956 aa29.41■■■□□ 2.3
TTC19-204ENST00000470399 ARPP21Q9UBL0 812 aaPredicted RBP29.41■■■□□ 2.3
TTC19-204ENST00000470399 RIPK3Q9Y572 518 aa29.41■■■□□ 2.3
TTC19-204ENST00000470399 A0A1W2PQ45 241 aaPredicted RBP29.4■■■□□ 2.3
TTC19-204ENST00000470399 A0A1W2PQY0 241 aa29.4■■■□□ 2.3
TTC19-204ENST00000470399 GSG1L2A8MUP6 293 aa29.4■■■□□ 2.3
TTC19-204ENST00000470399 C20orf194Q5TEA3 1177 aa29.4■■■□□ 2.3
TTC19-204ENST00000470399 STK11IPQ8N1F8 1099 aa29.4■■■□□ 2.3
TTC19-204ENST00000470399 SEMA6BQ9H3T3 888 aa29.4■■■□□ 2.3
TTC19-204ENST00000470399 RAD21O60216 631 aa29.39■■■□□ 2.3
TTC19-204ENST00000470399 SBK1Q52WX2 424 aa29.39■■■□□ 2.3
TTC19-204ENST00000470399 SNAI1O95863 264 aaPredicted RBP29.38■■■□□ 2.29
TTC19-204ENST00000470399 CLTBP09497 229 aa29.38■■■□□ 2.29
TTC19-204ENST00000470399 OSBP2Q969R2 916 aa29.38■■■□□ 2.29
TTC19-204ENST00000470399 DDRGK1Q96HY6 314 aa29.38■■■□□ 2.29
TTC19-204ENST00000470399 SLF1Q9BQI6 1058 aa29.38■■■□□ 2.29
TTC19-204ENST00000470399 LRRCC1Q9C099 1032 aa29.38■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms