RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 TAL1P17542 331 aaPredicted RBP22.11■■□□□ 1.13
TTC28-205ENST00000469670 SIAH1Q8IUQ4 282 aa22.11■■□□□ 1.13
TTC28-205ENST00000469670 SH2D4AQ9H788 454 aa22.11■■□□□ 1.13
TTC28-205ENST00000469670 VCPKMTQ9H867 229 aa22.11■■□□□ 1.13
TTC28-205ENST00000469670 WDR46O15213 610 aaKnown RBP22.1■■□□□ 1.13
TTC28-205ENST00000469670 CYP2D6P10635 497 aa22.1■■□□□ 1.13
TTC28-205ENST00000469670 AKR1A1P14550 325 aa22.1■■□□□ 1.13
TTC28-205ENST00000469670 ICA1Q05084 483 aa22.1■■□□□ 1.13
TTC28-205ENST00000469670 FAAP100Q0VG06 881 aa22.1■■□□□ 1.13
TTC28-205ENST00000469670 ANKRD33Q7Z3H0 272 aa22.1■■□□□ 1.13
TTC28-205ENST00000469670 CLEC10AQ8IUN9 316 aa22.1■■□□□ 1.13
TTC28-205ENST00000469670 SDR42E1Q8WUS8 393 aa22.1■■□□□ 1.13
TTC28-205ENST00000469670 TIFAQ96CG3 184 aa22.1■■□□□ 1.13
TTC28-205ENST00000469670 TOX2Q96NM4 488 aa22.1■■□□□ 1.13
TTC28-205ENST00000469670 SWAP70Q9UH65 585 aa22.1■■□□□ 1.13
TTC28-205ENST00000469670 DIS3Q9Y2L1 958 aaKnown RBP22.1■■□□□ 1.13
TTC28-205ENST00000469670 ROBO3Q96MS0 1386 aa22.1■■□□□ 1.13
TTC28-205ENST00000469670 DCDC2CA8MYV0 355 aa22.09■■□□□ 1.13
TTC28-205ENST00000469670 ZNF865P0CJ78 1059 aaPredicted RBP22.09■■□□□ 1.13
TTC28-205ENST00000469670 PDE6AP16499 860 aa22.09■■□□□ 1.13
TTC28-205ENST00000469670 KCTD2Q14681 263 aa22.09■■□□□ 1.13
TTC28-205ENST00000469670 ZNF792Q3KQV3 632 aa22.09■■□□□ 1.13
TTC28-205ENST00000469670 SLC9C2Q5TAH2 1124 aa22.09■■□□□ 1.13
TTC28-205ENST00000469670 LENG1Q96BZ8 264 aaPredicted RBP22.09■■□□□ 1.13
TTC28-205ENST00000469670 TSEN34Q9BSV6 310 aaKnown RBP22.09■■□□□ 1.13
TTC28-205ENST00000469670 DCP1AQ9NPI6 582 aaPredicted RBP22.09■■□□□ 1.13
TTC28-205ENST00000469670 STARD7Q9NQZ5 370 aa22.09■■□□□ 1.13
TTC28-205ENST00000469670 ADAMTS4O75173 837 aa22.08■■□□□ 1.13
TTC28-205ENST00000469670 AKR1B1P15121 316 aa22.08■■□□□ 1.13
TTC28-205ENST00000469670 TTF1Q15361 905 aaPredicted RBP22.08■■□□□ 1.13
TTC28-205ENST00000469670 ZKSCAN2Q63HK3 967 aa22.08■■□□□ 1.13
TTC28-205ENST00000469670 AACSQ86V21 672 aa22.08■■□□□ 1.13
TTC28-205ENST00000469670 RIOX2Q8IUF8 465 aa22.08■■□□□ 1.13
TTC28-205ENST00000469670 DYNLL2Q96FJ2 89 aa22.08■■□□□ 1.13
TTC28-205ENST00000469670 ADAMTS5Q9UNA0 930 aa22.08■■□□□ 1.13
TTC28-205ENST00000469670 NAV1Q8NEY1 1877 aa22.07■■□□□ 1.12
TTC28-205ENST00000469670 MUC3AQ02505 3323 aa22.07■■□□□ 1.12
TTC28-205ENST00000469670 TIMP1P01033 207 aa22.07■■□□□ 1.12
TTC28-205ENST00000469670 ACLYP53396 1101 aa22.07■■□□□ 1.12
TTC28-205ENST00000469670 NUP133Q8WUM0 1156 aa22.07■■□□□ 1.12
TTC28-205ENST00000469670 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.07■■□□□ 1.12
TTC28-205ENST00000469670 CNPY2Q9Y2B0 182 aa22.07■■□□□ 1.12
TTC28-205ENST00000469670 ZNF532Q9HCE3 1301 aa22.06■■□□□ 1.12
TTC28-205ENST00000469670 STAT3P40763 770 aa22.06■■□□□ 1.12
TTC28-205ENST00000469670 LCORLQ8N3X6 602 aa22.06■■□□□ 1.12
TTC28-205ENST00000469670 PPM1EQ8WY54 764 aa22.06■■□□□ 1.12
TTC28-205ENST00000469670 GAS2L1Q99501 681 aaPredicted RBP22.06■■□□□ 1.12
TTC28-205ENST00000469670 FBXO28Q9NVF7 368 aa22.06■■□□□ 1.12
TTC28-205ENST00000469670 SYNRGQ9UMZ2 1314 aa22.06■■□□□ 1.12
TTC28-205ENST00000469670 MOXD2PA6NHM9 499 aa22.05■■□□□ 1.12
TTC28-205ENST00000469670 MFSD5Q6N075 450 aa22.05■■□□□ 1.12
TTC28-205ENST00000469670 TBX21Q9UL17 535 aa22.05■■□□□ 1.12
TTC28-205ENST00000469670 VWA5AO00534 786 aa22.04■■□□□ 1.12
TTC28-205ENST00000469670 COPB2P35606 906 aa22.04■■□□□ 1.12
TTC28-205ENST00000469670 PPIGQ13427 754 aaKnown RBP eCLIP22.04■■□□□ 1.12
TTC28-205ENST00000469670 KCNA10Q16322 511 aa22.04■■□□□ 1.12
TTC28-205ENST00000469670 CCDC129Q6ZRS4 1044 aa22.04■■□□□ 1.12
TTC28-205ENST00000469670 ERC1Q8IUD2 1116 aa22.04■■□□□ 1.12
TTC28-205ENST00000469670 KLHDC9Q8NEP7 349 aa22.04■■□□□ 1.12
TTC28-205ENST00000469670 ATXN2LQ8WWM7 1075 aaKnown RBP22.04■■□□□ 1.12
TTC28-205ENST00000469670 CCDC17Q96LX7 622 aa22.04■■□□□ 1.12
TTC28-205ENST00000469670 PBX4Q9BYU1 374 aa22.04■■□□□ 1.12
TTC28-205ENST00000469670 ZNF214Q9UL59 606 aaPredicted RBP22.04■■□□□ 1.12
TTC28-205ENST00000469670 FAM184BQ9ULE4 1060 aa22.04■■□□□ 1.12
TTC28-205ENST00000469670 PPP1R9AQ9ULJ8 1098 aa22.04■■□□□ 1.12
TTC28-205ENST00000469670 EXOC6BQ9Y2D4 811 aa22.04■■□□□ 1.12
TTC28-205ENST00000469670 SMCHD1A6NHR9 2005 aa22.03■■□□□ 1.12
TTC28-205ENST00000469670 TCRBV5S4A2TA0A5A2 114 aa22.03■■□□□ 1.12
TTC28-205ENST00000469670 GRXCR1A8MXD5 290 aa22.03■■□□□ 1.12
TTC28-205ENST00000469670 PBX2P40425 430 aa22.03■■□□□ 1.12
TTC28-205ENST00000469670 CCDC174Q6PII3 467 aa22.03■■□□□ 1.12
TTC28-205ENST00000469670 C16orf59Q7L2K0 433 aa22.03■■□□□ 1.12
TTC28-205ENST00000469670 PRDM12Q9H4Q4 367 aa22.03■■□□□ 1.12
TTC28-205ENST00000469670 ARMT1Q9H993 441 aa22.03■■□□□ 1.12
TTC28-205ENST00000469670 EEF2P13639 858 aaKnown RBP22.02■■□□□ 1.12
TTC28-205ENST00000469670 TMEM240Q5SV17 173 aa22.02■■□□□ 1.12
TTC28-205ENST00000469670 AKNAD1Q5T1N1 836 aa22.02■■□□□ 1.12
TTC28-205ENST00000469670 CCSAPQ6IQ19 270 aaPredicted RBP22.02■■□□□ 1.12
TTC28-205ENST00000469670 MSL3Q8N5Y2 521 aaKnown RBP22.02■■□□□ 1.12
TTC28-205ENST00000469670 REPS2Q8NFH8 660 aa22.02■■□□□ 1.12
TTC28-205ENST00000469670 THEGQ9P2T0 379 aa22.02■■□□□ 1.12
TTC28-205ENST00000469670 RAPGEFL1Q9UHV5 662 aa22.02■■□□□ 1.12
TTC28-205ENST00000469670 MROH7Q68CQ1 1323 aa22.02■■□□□ 1.12
TTC28-205ENST00000469670 GOLIM4O00461 696 aa22.01■■□□□ 1.11
TTC28-205ENST00000469670 PRKAB2O43741 272 aa22.01■■□□□ 1.11
TTC28-205ENST00000469670 SNAI1O95863 264 aaPredicted RBP22.01■■□□□ 1.11
TTC28-205ENST00000469670 CDK8P49336 464 aa22.01■■□□□ 1.11
TTC28-205ENST00000469670 RASIP1Q5U651 963 aa22.01■■□□□ 1.11
TTC28-205ENST00000469670 CEP85Q6P2H3 762 aa22.01■■□□□ 1.11
TTC28-205ENST00000469670 ITPRIPQ8IWB1 547 aa22.01■■□□□ 1.11
TTC28-205ENST00000469670 FTSJ3Q8IY81 847 aaKnown RBP22.01■■□□□ 1.11
TTC28-205ENST00000469670 GLT1D1Q96MS3 346 aa22.01■■□□□ 1.11
TTC28-205ENST00000469670 ASB2Q96Q27 587 aa22.01■■□□□ 1.11
TTC28-205ENST00000469670 DNAJC2Q99543 621 aaKnown RBP22.01■■□□□ 1.11
TTC28-205ENST00000469670 IL1RAPL2Q9NP60 686 aa22.01■■□□□ 1.11
TTC28-205ENST00000469670 ATP8A2Q9NTI2 1148 aa22.01■■□□□ 1.11
TTC28-205ENST00000469670 ZHX1Q9UKY1 873 aaPredicted RBP22.01■■□□□ 1.11
TTC28-205ENST00000469670 ELP1O95163 1332 aa22.01■■□□□ 1.11
TTC28-205ENST00000469670 SYNGAP1Q96PV0 1343 aa22.01■■□□□ 1.11
TTC28-205ENST00000469670 MYADML2A6NDP7 307 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms