RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 ZKSCAN1P17029 563 aaPredicted RBP21.72■■□□□ 1.07
PHGDH-204ENST00000469443 SDSP20132 328 aa21.72■■□□□ 1.07
PHGDH-204ENST00000469443 CTDSPL2Q05D32 466 aa21.72■■□□□ 1.07
PHGDH-204ENST00000469443 TRIM32Q13049 653 aa21.72■■□□□ 1.07
PHGDH-204ENST00000469443 FAM83BQ5T0W9 1011 aa21.72■■□□□ 1.07
PHGDH-204ENST00000469443 SAMD1Q6SPF0 538 aaPredicted RBP21.72■■□□□ 1.07
PHGDH-204ENST00000469443 SHCBP1Q8NEM2 672 aa21.72■■□□□ 1.07
PHGDH-204ENST00000469443 MKL1Q969V6 931 aa21.72■■□□□ 1.07
PHGDH-204ENST00000469443 DEFB118Q96PH6 123 aa21.72■■□□□ 1.07
PHGDH-204ENST00000469443 HMX1Q9NP08 348 aaPredicted RBP21.72■■□□□ 1.07
PHGDH-204ENST00000469443 MTMR4Q9NYA4 1195 aa21.72■■□□□ 1.07
PHGDH-204ENST00000469443 ANAPC4Q9UJX5 808 aa21.72■■□□□ 1.07
PHGDH-204ENST00000469443 ADAMTS5Q9UNA0 930 aa21.72■■□□□ 1.07
PHGDH-204ENST00000469443 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.72■■□□□ 1.07
PHGDH-204ENST00000469443 RPTORQ8N122 1335 aa21.72■■□□□ 1.07
PHGDH-204ENST00000469443 LAMA4Q16363 1823 aa21.71■■□□□ 1.07
PHGDH-204ENST00000469443 PLXNA1Q9UIW2 1896 aa21.71■■□□□ 1.07
PHGDH-204ENST00000469443 F5H6K3 240 aa21.71■■□□□ 1.07
PHGDH-204ENST00000469443 TTLL1O95922 423 aa21.71■■□□□ 1.07
PHGDH-204ENST00000469443 TFAP4Q01664 338 aa21.71■■□□□ 1.07
PHGDH-204ENST00000469443 KLRC3Q07444 240 aa21.71■■□□□ 1.07
PHGDH-204ENST00000469443 GRB14Q14449 540 aa21.71■■□□□ 1.07
PHGDH-204ENST00000469443 FAM47AQ5JRC9 791 aa21.71■■□□□ 1.07
PHGDH-204ENST00000469443 ZNF589Q86UQ0 364 aaPredicted RBP21.71■■□□□ 1.07
PHGDH-204ENST00000469443 FBXO28Q9NVF7 368 aa21.71■■□□□ 1.07
PHGDH-204ENST00000469443 SYNPO2Q9UMS6 1093 aa21.71■■□□□ 1.07
PHGDH-204ENST00000469443 CCDC171Q6TFL3 1326 aa21.71■■□□□ 1.07
PHGDH-204ENST00000469443 FRMPD3Q5JV73 1810 aa21.71■■□□□ 1.07
PHGDH-204ENST00000469443 NDUFB10O96000 172 aa21.7■■□□□ 1.06
PHGDH-204ENST00000469443 HSPD1P10809 573 aaKnown RBP21.7■■□□□ 1.06
PHGDH-204ENST00000469443 PLS1Q14651 629 aa21.7■■□□□ 1.06
PHGDH-204ENST00000469443 MAP3K21Q5TCX8 1036 aa21.7■■□□□ 1.06
PHGDH-204ENST00000469443 PPP1R9AQ9ULJ8 1098 aa21.7■■□□□ 1.06
PHGDH-204ENST00000469443 ZMYM6O95789 1325 aa21.7■■□□□ 1.06
PHGDH-204ENST00000469443 STRNO43815 780 aa21.69■■□□□ 1.06
PHGDH-204ENST00000469443 FGAP02671 866 aa21.69■■□□□ 1.06
PHGDH-204ENST00000469443 TFRCP02786 760 aaKnown RBP21.69■■□□□ 1.06
PHGDH-204ENST00000469443 PRKAR2AP13861 404 aaKnown RBP21.69■■□□□ 1.06
PHGDH-204ENST00000469443 ERCC3P19447 782 aa21.69■■□□□ 1.06
PHGDH-204ENST00000469443 MFAP1P55081 439 aaKnown RBP21.69■■□□□ 1.06
PHGDH-204ENST00000469443 CCL14Q16627 93 aa21.69■■□□□ 1.06
PHGDH-204ENST00000469443 UBE2Q1Q7Z7E8 422 aa21.69■■□□□ 1.06
PHGDH-204ENST00000469443 NUP88Q99567 741 aaPredicted RBP21.69■■□□□ 1.06
PHGDH-204ENST00000469443 CRISPLD2Q9H0B8 497 aa21.69■■□□□ 1.06
PHGDH-204ENST00000469443 MROH8Q9H579 483 aa21.69■■□□□ 1.06
PHGDH-204ENST00000469443 HOXC6P09630 235 aa21.68■■□□□ 1.06
PHGDH-204ENST00000469443 TMEM132BQ14DG7 1078 aa21.68■■□□□ 1.06
PHGDH-204ENST00000469443 INCENPQ9NQS7 918 aa21.68■■□□□ 1.06
PHGDH-204ENST00000469443 TACC3Q9Y6A5 838 aa21.68■■□□□ 1.06
PHGDH-204ENST00000469443 TSPY2A6NKD2 308 aa21.67■■□□□ 1.06
PHGDH-204ENST00000469443 HIP1O00291 1037 aa21.67■■□□□ 1.06
PHGDH-204ENST00000469443 VWA5AO00534 786 aa21.67■■□□□ 1.06
PHGDH-204ENST00000469443 ORC4O43929 436 aa21.67■■□□□ 1.06
PHGDH-204ENST00000469443 FARP2O94887 1054 aaPredicted RBP21.67■■□□□ 1.06
PHGDH-204ENST00000469443 SLC25A27O95847 323 aa21.67■■□□□ 1.06
PHGDH-204ENST00000469443 PDE4AP27815 886 aa21.67■■□□□ 1.06
PHGDH-204ENST00000469443 CACNB2Q08289 660 aaPredicted RBP21.67■■□□□ 1.06
PHGDH-204ENST00000469443 PPP4R3BQ5MIZ7 849 aa21.67■■□□□ 1.06
PHGDH-204ENST00000469443 NCAPG2Q86XI2 1143 aa21.67■■□□□ 1.06
PHGDH-204ENST00000469443 LRRC47Q8N1G4 583 aaKnown RBP21.67■■□□□ 1.06
PHGDH-204ENST00000469443 GMCL1P1Q8NEA9 526 aa21.67■■□□□ 1.06
PHGDH-204ENST00000469443 SLF1Q9BQI6 1058 aa21.67■■□□□ 1.06
PHGDH-204ENST00000469443 DIAPH3Q9NSV4 1193 aa21.67■■□□□ 1.06
PHGDH-204ENST00000469443 CEP290O15078 2479 aa21.66■■□□□ 1.06
PHGDH-204ENST00000469443 FGRP09769 529 aa21.66■■□□□ 1.06
PHGDH-204ENST00000469443 ADORA2AP29274 412 aa21.66■■□□□ 1.06
PHGDH-204ENST00000469443 REPS2Q8NFH8 660 aa21.66■■□□□ 1.06
PHGDH-204ENST00000469443 NPLOC4Q8TAT6 608 aa21.66■■□□□ 1.06
PHGDH-204ENST00000469443 FLRT1Q9NZU1 646 aa21.66■■□□□ 1.06
PHGDH-204ENST00000469443 ALPK3Q96L96 1907 aa21.66■■□□□ 1.06
PHGDH-204ENST00000469443 RANBP6O60518 1105 aaKnown RBP21.65■■□□□ 1.06
PHGDH-204ENST00000469443 CWC27Q6UX04 472 aaKnown RBP21.65■■□□□ 1.06
PHGDH-204ENST00000469443 DPP9Q86TI2 863 aa21.65■■□□□ 1.06
PHGDH-204ENST00000469443 RIOX2Q8IUF8 465 aa21.65■■□□□ 1.06
PHGDH-204ENST00000469443 ABRAQ8N0Z2 381 aa21.65■■□□□ 1.06
PHGDH-204ENST00000469443 PRPF38AQ8NAV1 312 aaKnown RBP21.65■■□□□ 1.06
PHGDH-204ENST00000469443 ZNF214Q9UL59 606 aaPredicted RBP21.65■■□□□ 1.06
PHGDH-204ENST00000469443 STAT3P40763 770 aa21.64■■□□□ 1.05
PHGDH-204ENST00000469443 MFSD14CQ5VZR4 134 aa21.64■■□□□ 1.05
PHGDH-204ENST00000469443 SLFN13Q68D06 897 aa21.64■■□□□ 1.05
PHGDH-204ENST00000469443 IL17RBQ9NRM6 502 aa21.64■■□□□ 1.05
PHGDH-204ENST00000469443 FEM1BQ9UK73 627 aa21.64■■□□□ 1.05
PHGDH-204ENST00000469443 STX8Q9UNK0 236 aa21.64■■□□□ 1.05
PHGDH-204ENST00000469443 FCER1AP12319 257 aa21.63■■□□□ 1.05
PHGDH-204ENST00000469443 BMP3P12645 472 aa21.63■■□□□ 1.05
PHGDH-204ENST00000469443 COPB2P35606 906 aa21.63■■□□□ 1.05
PHGDH-204ENST00000469443 HAND2P61296 217 aa21.63■■□□□ 1.05
PHGDH-204ENST00000469443 TTC22Q5TAA0 569 aa21.63■■□□□ 1.05
PHGDH-204ENST00000469443 ANKLE1Q8NAG6 615 aa21.63■■□□□ 1.05
PHGDH-204ENST00000469443 HTATIP2Q9BUP3 242 aa21.63■■□□□ 1.05
PHGDH-204ENST00000469443 TOMM22Q9NS69 142 aa21.63■■□□□ 1.05
PHGDH-204ENST00000469443 SLC5A4Q9NY91 659 aa21.63■■□□□ 1.05
PHGDH-204ENST00000469443 NMT2O60551 498 aa21.62■■□□□ 1.05
PHGDH-204ENST00000469443 CCND3P30281 292 aaPredicted RBP21.62■■□□□ 1.05
PHGDH-204ENST00000469443 OGDHLQ9ULD0 1010 aa21.62■■□□□ 1.05
PHGDH-204ENST00000469443 COBLO75128 1261 aa21.61■■□□□ 1.05
PHGDH-204ENST00000469443 ZBED4O75132 1171 aa21.61■■□□□ 1.05
PHGDH-204ENST00000469443 IGHA2P01877 340 aa21.61■■□□□ 1.05
PHGDH-204ENST00000469443 PCP11498 1178 aaKnown RBP21.61■■□□□ 1.05
PHGDH-204ENST00000469443 GSPT1P15170 499 aaKnown RBP21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms