RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 IGHMBP2P38935 993 aaKnown RBP13.65□□□□□ -0.22
VARS2-205ENST00000469358 KCNQ4P56696 695 aa13.65□□□□□ -0.22
VARS2-205ENST00000469358 PDXDC2PQ6P474 469 aa13.65□□□□□ -0.22
VARS2-205ENST00000469358 CNGA4Q8IV77 575 aa13.65□□□□□ -0.22
VARS2-205ENST00000469358 NAPGQ99747 312 aaPredicted RBP13.65□□□□□ -0.22
VARS2-205ENST00000469358 RIOK1Q9BRS2 568 aaKnown RBP13.65□□□□□ -0.22
VARS2-205ENST00000469358 NIP7Q9Y221 180 aaKnown RBP eCLIP13.65□□□□□ -0.22
VARS2-205ENST00000469358 TTC26A0AVF1 554 aa13.64□□□□□ -0.23
VARS2-205ENST00000469358 LRRIQ3A6PVS8 624 aaPredicted RBP13.64□□□□□ -0.23
VARS2-205ENST00000469358 PRPF3O43395 683 aaKnown RBP13.64□□□□□ -0.23
VARS2-205ENST00000469358 ATP8B1O43520 1251 aa13.64□□□□□ -0.23
VARS2-205ENST00000469358 TCP11X2Q5H9J9 407 aa13.64□□□□□ -0.23
VARS2-205ENST00000469358 SLC51AQ86UW1 340 aa13.64□□□□□ -0.23
VARS2-205ENST00000469358 PAPPAQ13219 1627 aa13.64□□□□□ -0.23
VARS2-205ENST00000469358 MYH8P13535 1937 aa13.64□□□□□ -0.23
VARS2-205ENST00000469358 FAM205AQ6ZU69 1335 aa13.64□□□□□ -0.23
VARS2-205ENST00000469358 MYH2Q9UKX2 1941 aa13.64□□□□□ -0.23
VARS2-205ENST00000469358 ERCC3P19447 782 aa13.64□□□□□ -0.23
VARS2-205ENST00000469358 PAK1Q13153 545 aa13.64□□□□□ -0.23
VARS2-205ENST00000469358 BRD3Q15059 726 aa13.64□□□□□ -0.23
VARS2-205ENST00000469358 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.64□□□□□ -0.23
VARS2-205ENST00000469358 IRF2BP1Q8IU81 584 aa13.64□□□□□ -0.23
VARS2-205ENST00000469358 TXLNBQ8N3L3 684 aa13.64□□□□□ -0.23
VARS2-205ENST00000469358 L1RE1Q9UN81 338 aa13.64□□□□□ -0.23
VARS2-205ENST00000469358 NID2Q14112 1375 aa13.64□□□□□ -0.23
VARS2-205ENST00000469358 CTAGE15A4D2H0 777 aa13.64□□□□□ -0.23
VARS2-205ENST00000469358 CTAGE8P0CG41 777 aa13.64□□□□□ -0.23
VARS2-205ENST00000469358 ATP2C1P98194 919 aaPredicted RBP13.64□□□□□ -0.23
VARS2-205ENST00000469358 CTR9Q6PD62 1173 aa13.64□□□□□ -0.23
VARS2-205ENST00000469358 CTAGE6Q86UF2 777 aa13.64□□□□□ -0.23
VARS2-205ENST00000469358 CTAGE4Q8IX94 777 aa13.64□□□□□ -0.23
VARS2-205ENST00000469358 CEP112Q8N8E3 955 aa13.64□□□□□ -0.23
VARS2-205ENST00000469358 RASSF8Q8NHQ8 419 aa13.64□□□□□ -0.23
VARS2-205ENST00000469358 RIN2Q8WYP3 895 aaPredicted RBP13.64□□□□□ -0.23
VARS2-205ENST00000469358 DUSP10Q9Y6W6 482 aa13.64□□□□□ -0.23
VARS2-205ENST00000469358 PLEKHG2Q9H7P9 1386 aa13.64□□□□□ -0.23
VARS2-205ENST00000469358 TULP2O00295 520 aa13.63□□□□□ -0.23
VARS2-205ENST00000469358 CASP8Q14790 479 aa13.63□□□□□ -0.23
VARS2-205ENST00000469358 BICDL1Q6ZP65 573 aa13.63□□□□□ -0.23
VARS2-205ENST00000469358 TMTC3Q6ZXV5 915 aa13.63□□□□□ -0.23
VARS2-205ENST00000469358 C10orf67Q8IYJ2 551 aa13.63□□□□□ -0.23
VARS2-205ENST00000469358 IQUBQ8NA54 791 aa13.63□□□□□ -0.23
VARS2-205ENST00000469358 FERMT2Q96AC1 680 aa13.63□□□□□ -0.23
VARS2-205ENST00000469358 CTAGE1Q96RT6 745 aa13.63□□□□□ -0.23
VARS2-205ENST00000469358 SHANK3Q9BYB0 1731 aa13.63□□□□□ -0.23
VARS2-205ENST00000469358 CNTNAP5Q8WYK1 1306 aa13.63□□□□□ -0.23
VARS2-205ENST00000469358 ATP1A1P05023 1023 aaKnown RBP13.63□□□□□ -0.23
VARS2-205ENST00000469358 NAA15Q9BXJ9 866 aaKnown RBP13.63□□□□□ -0.23
VARS2-205ENST00000469358 CPVLQ9H3G5 476 aa13.63□□□□□ -0.23
VARS2-205ENST00000469358 SLAIN2Q9P270 581 aa13.63□□□□□ -0.23
VARS2-205ENST00000469358 COL1A1P02452 1464 aaPredicted RBP13.63□□□□□ -0.23
VARS2-205ENST00000469358 CHD4Q14839 1912 aa13.63□□□□□ -0.23
VARS2-205ENST00000469358 ZNF185O15231 689 aa13.62□□□□□ -0.23
VARS2-205ENST00000469358 RPN1P04843 607 aaKnown RBP13.62□□□□□ -0.23
VARS2-205ENST00000469358 HDXQ7Z353 690 aa13.62□□□□□ -0.23
VARS2-205ENST00000469358 IQCA1Q86XH1 822 aa13.62□□□□□ -0.23
VARS2-205ENST00000469358 LRRC15Q8TF66 581 aa13.62□□□□□ -0.23
VARS2-205ENST00000469358 MMS19Q96T76 1030 aa13.62□□□□□ -0.23
VARS2-205ENST00000469358 MYO6Q9UM54 1294 aa13.62□□□□□ -0.23
VARS2-205ENST00000469358 RTL9Q8NET4 1388 aa13.62□□□□□ -0.23
VARS2-205ENST00000469358 GPS2Q13227 327 aa13.62□□□□□ -0.23
VARS2-205ENST00000469358 TYW1BQ6NUM6 668 aa13.62□□□□□ -0.23
VARS2-205ENST00000469358 TMTC1Q8IUR5 882 aa13.62□□□□□ -0.23
VARS2-205ENST00000469358 TRIM34Q9BYJ4 488 aa13.62□□□□□ -0.23
VARS2-205ENST00000469358 TFCP2L1Q9NZI6 479 aa13.62□□□□□ -0.23
VARS2-205ENST00000469358 LIMA1Q9UHB6 759 aaKnown RBP13.62□□□□□ -0.23
VARS2-205ENST00000469358 FEZ2Q9UHY8 353 aaPredicted RBP13.62□□□□□ -0.23
VARS2-205ENST00000469358 EPN1Q9Y6I3 576 aaPredicted RBP13.62□□□□□ -0.23
VARS2-205ENST00000469358 BAZ2AQ9UIF9 1905 aaKnown RBP13.62□□□□□ -0.23
VARS2-205ENST00000469358 RCCD1A6NED2 376 aa13.62□□□□□ -0.23
VARS2-205ENST00000469358 PARP1P09874 1014 aaKnown RBP13.62□□□□□ -0.23
VARS2-205ENST00000469358 CYP27A1Q02318 531 aa13.62□□□□□ -0.23
VARS2-205ENST00000469358 CCDC152Q4G0S7 254 aa13.62□□□□□ -0.23
VARS2-205ENST00000469358 CYP26C1Q6V0L0 522 aa13.62□□□□□ -0.23
VARS2-205ENST00000469358 STAG2Q8N3U4 1231 aa13.62□□□□□ -0.23
VARS2-205ENST00000469358 MSANTD4Q8NCY6 345 aa13.62□□□□□ -0.23
VARS2-205ENST00000469358 HPS3Q969F9 1004 aa13.62□□□□□ -0.23
VARS2-205ENST00000469358 TMEM60Q9H2L4 133 aa13.62□□□□□ -0.23
VARS2-205ENST00000469358 AGPAT5Q9NUQ2 364 aa13.62□□□□□ -0.23
VARS2-205ENST00000469358 RAB21Q9UL25 225 aa13.62□□□□□ -0.23
VARS2-205ENST00000469358 TTF2Q9UNY4 1162 aaKnown RBP13.62□□□□□ -0.23
VARS2-205ENST00000469358 NDUFA10O95299 355 aa13.61□□□□□ -0.23
VARS2-205ENST00000469358 IL6STP40189 918 aaPredicted RBP13.61□□□□□ -0.23
VARS2-205ENST00000469358 INTS5Q6P9B9 1019 aaKnown RBP13.61□□□□□ -0.23
VARS2-205ENST00000469358 BRMS1Q9HCU9 246 aa13.61□□□□□ -0.23
VARS2-205ENST00000469358 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.61□□□□□ -0.23
VARS2-205ENST00000469358 STAT6P42226 847 aa13.61□□□□□ -0.23
VARS2-205ENST00000469358 LACRTQ9GZZ8 138 aa13.61□□□□□ -0.23
VARS2-205ENST00000469358 RWDD2AQ9UIY3 292 aa13.61□□□□□ -0.23
VARS2-205ENST00000469358 B4DLN1 442 aa13.61□□□□□ -0.23
VARS2-205ENST00000469358 SCG2P13521 617 aa13.61□□□□□ -0.23
VARS2-205ENST00000469358 TNNT3P45378 269 aaPredicted RBP13.61□□□□□ -0.23
VARS2-205ENST00000469358 CRKLP46109 303 aaKnown RBP13.61□□□□□ -0.23
VARS2-205ENST00000469358 HERVK_113P62684 666 aa13.61□□□□□ -0.23
VARS2-205ENST00000469358 AMPD2Q01433 879 aa13.61□□□□□ -0.23
VARS2-205ENST00000469358 FKBP15Q5T1M5 1219 aa13.61□□□□□ -0.23
VARS2-205ENST00000469358 CTCFLQ8NI51 663 aaPredicted RBP13.61□□□□□ -0.23
VARS2-205ENST00000469358 BCL9O00512 1426 aa13.6□□□□□ -0.23
VARS2-205ENST00000469358 ERVV-1B6SEH8 477 aa13.6□□□□□ -0.23
VARS2-205ENST00000469358 ATP6V1AP38606 617 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms