RNA–Protein interactions for RNA: ENST00000469356.3

SREBF1-208, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-208ENST00000469356 SLC12A7Q9Y666 1083 aa26.84■■□□□ 1.89
SREBF1-208ENST00000469356 THSD7BQ9C0I4 1608 aa26.83■■□□□ 1.89
SREBF1-208ENST00000469356 CPA1P15085 419 aa26.83■■□□□ 1.89
SREBF1-208ENST00000469356 TREML2Q5T2D2 321 aa26.83■■□□□ 1.89
SREBF1-208ENST00000469356 GPATCH4Q5T3I0 446 aaKnown RBP26.83■■□□□ 1.89
SREBF1-208ENST00000469356 CATSPERGQ6ZRH7 1159 aa26.83■■□□□ 1.89
SREBF1-208ENST00000469356 GTF3C2Q8WUA4 911 aaPredicted RBP26.83■■□□□ 1.89
SREBF1-208ENST00000469356 CHURC1Q8WUH1 139 aa26.83■■□□□ 1.89
SREBF1-208ENST00000469356 TCEANC2Q96MN5 208 aa26.83■■□□□ 1.89
SREBF1-208ENST00000469356 PTPN18Q99952 460 aa26.83■■□□□ 1.89
SREBF1-208ENST00000469356 HOXC10Q9NYD6 342 aa26.83■■□□□ 1.89
SREBF1-208ENST00000469356 IGF2BP3O00425 579 aaKnown RBP eCLIP26.82■■□□□ 1.88
SREBF1-208ENST00000469356 DDAH1O94760 285 aa26.82■■□□□ 1.88
SREBF1-208ENST00000469356 RABEP1Q15276 862 aa26.82■■□□□ 1.88
SREBF1-208ENST00000469356 TAF1CQ15572 869 aaPredicted RBP26.82■■□□□ 1.88
SREBF1-208ENST00000469356 CCDC96Q2M329 555 aa26.82■■□□□ 1.88
SREBF1-208ENST00000469356 FAM83BQ5T0W9 1011 aa26.82■■□□□ 1.88
SREBF1-208ENST00000469356 FAM43AQ8N2R8 423 aa26.82■■□□□ 1.88
SREBF1-208ENST00000469356 MAP3K14Q99558 947 aa26.82■■□□□ 1.88
SREBF1-208ENST00000469356 ALDH8A1Q9H2A2 487 aaPredicted RBP26.82■■□□□ 1.88
SREBF1-208ENST00000469356 ZFYVE28Q9HCC9 887 aa26.82■■□□□ 1.88
SREBF1-208ENST00000469356 FEM1BQ9UK73 627 aa26.82■■□□□ 1.88
SREBF1-208ENST00000469356 CA12O43570 354 aa26.81■■□□□ 1.88
SREBF1-208ENST00000469356 NEK4P51957 841 aa26.81■■□□□ 1.88
SREBF1-208ENST00000469356 IKQ13123 557 aaPredicted RBP26.81■■□□□ 1.88
SREBF1-208ENST00000469356 DGKZQ13574 1117 aa26.81■■□□□ 1.88
SREBF1-208ENST00000469356 COG2Q14746 738 aa26.81■■□□□ 1.88
SREBF1-208ENST00000469356 ASPRV1Q53RT3 343 aa26.81■■□□□ 1.88
SREBF1-208ENST00000469356 FAM160B2Q86V87 743 aa26.81■■□□□ 1.88
SREBF1-208ENST00000469356 ZNF654Q8IZM8 581 aa26.81■■□□□ 1.88
SREBF1-208ENST00000469356 AGXT2Q9BYV1 514 aa26.81■■□□□ 1.88
SREBF1-208ENST00000469356 PARP1P09874 1014 aaKnown RBP26.8■■□□□ 1.88
SREBF1-208ENST00000469356 PDHBP11177 359 aa26.8■■□□□ 1.88
SREBF1-208ENST00000469356 KIF5BP33176 963 aa26.8■■□□□ 1.88
SREBF1-208ENST00000469356 CTCFLQ8NI51 663 aaPredicted RBP26.8■■□□□ 1.88
SREBF1-208ENST00000469356 SMCR8Q8TEV9 937 aaPredicted RBP26.8■■□□□ 1.88
SREBF1-208ENST00000469356 BRF1Q92994 677 aa26.8■■□□□ 1.88
SREBF1-208ENST00000469356 MYPNQ86TC9 1320 aa26.8■■□□□ 1.88
SREBF1-208ENST00000469356 PLA2G6O60733 806 aa26.79■■□□□ 1.88
SREBF1-208ENST00000469356 FLOT1O75955 427 aa26.79■■□□□ 1.88
SREBF1-208ENST00000469356 SNHG28P0DPA3 235 aa26.79■■□□□ 1.88
SREBF1-208ENST00000469356 STAT2P52630 851 aa26.79■■□□□ 1.88
SREBF1-208ENST00000469356 RCAN1P53805 252 aa26.79■■□□□ 1.88
SREBF1-208ENST00000469356 KIAA1755Q5JYT7 1200 aa26.79■■□□□ 1.88
SREBF1-208ENST00000469356 NUP133Q8WUM0 1156 aa26.79■■□□□ 1.88
SREBF1-208ENST00000469356 ASCC2Q9H1I8 757 aaPredicted RBP26.79■■□□□ 1.88
SREBF1-208ENST00000469356 SAGE1Q9NXZ1 904 aa26.79■■□□□ 1.88
SREBF1-208ENST00000469356 TMEM232C9JQI7 657 aa26.78■■□□□ 1.88
SREBF1-208ENST00000469356 FDX1P10109 184 aa26.78■■□□□ 1.88
SREBF1-208ENST00000469356 GCLCP48506 637 aaPredicted RBP26.78■■□□□ 1.88
SREBF1-208ENST00000469356 GNAQP50148 359 aa26.78■■□□□ 1.88
SREBF1-208ENST00000469356 PPP2R5BQ15173 497 aa26.78■■□□□ 1.88
SREBF1-208ENST00000469356 GPHNQ9NQX3 736 aaPredicted RBP26.78■■□□□ 1.88
SREBF1-208ENST00000469356 NAP1L2Q9ULW6 460 aaPredicted RBP26.78■■□□□ 1.88
SREBF1-208ENST00000469356 CTDP1Q9Y5B0 961 aaPredicted RBP26.78■■□□□ 1.88
SREBF1-208ENST00000469356 KLF18A0A0U1RQI7 1052 aa26.77■■□□□ 1.88
SREBF1-208ENST00000469356 ZBTB43O43298 467 aa26.77■■□□□ 1.88
SREBF1-208ENST00000469356 ST18O60284 1047 aa26.77■■□□□ 1.88
SREBF1-208ENST00000469356 ZNF543Q08ER8 600 aa26.77■■□□□ 1.88
SREBF1-208ENST00000469356 COL9A3Q14050 684 aaPredicted RBP26.77■■□□□ 1.88
SREBF1-208ENST00000469356 PRPF38AQ8NAV1 312 aaKnown RBP26.77■■□□□ 1.88
SREBF1-208ENST00000469356 NUP88Q99567 741 aaPredicted RBP26.77■■□□□ 1.88
SREBF1-208ENST00000469356 SLF1Q9BQI6 1058 aa26.77■■□□□ 1.88
SREBF1-208ENST00000469356 TROAPQ12815 778 aa26.76■■□□□ 1.87
SREBF1-208ENST00000469356 APOA5Q6Q788 366 aa26.76■■□□□ 1.87
SREBF1-208ENST00000469356 KCTD1Q719H9 257 aa26.76■■□□□ 1.87
SREBF1-208ENST00000469356 JMYQ8N9B5 988 aa26.76■■□□□ 1.87
SREBF1-208ENST00000469356 SENP2Q9HC62 589 aa26.76■■□□□ 1.87
SREBF1-208ENST00000469356 RNF186Q9NXI6 227 aa26.76■■□□□ 1.87
SREBF1-208ENST00000469356 DSG3P32926 999 aa26.75■■□□□ 1.87
SREBF1-208ENST00000469356 APOBRQ0VD83 1088 aa26.75■■□□□ 1.87
SREBF1-208ENST00000469356 GRM4Q14833 912 aa26.75■■□□□ 1.87
SREBF1-208ENST00000469356 MB21D1Q8N884 522 aa26.75■■□□□ 1.87
SREBF1-208ENST00000469356 LZTS2Q9BRK4 669 aa26.75■■□□□ 1.87
SREBF1-208ENST00000469356 CFHR5Q9BXR6 569 aa26.75■■□□□ 1.87
SREBF1-208ENST00000469356 GPCPD1Q9NPB8 672 aa26.75■■□□□ 1.87
SREBF1-208ENST00000469356 RBM28Q9NW13 759 aaKnown RBP26.75■■□□□ 1.87
SREBF1-208ENST00000469356 PPP1R9AQ9ULJ8 1098 aa26.75■■□□□ 1.87
SREBF1-208ENST00000469356 CCDC196A0A1B0GTZ2 297 aa26.74■■□□□ 1.87
SREBF1-208ENST00000469356 TRPA1O75762 1119 aa26.74■■□□□ 1.87
SREBF1-208ENST00000469356 HERVK_113P62684 666 aa26.74■■□□□ 1.87
SREBF1-208ENST00000469356 CHMP4CQ96CF2 233 aa26.74■■□□□ 1.87
SREBF1-208ENST00000469356 ZNF274Q96GC6 653 aaPredicted RBP26.74■■□□□ 1.87
SREBF1-208ENST00000469356 P2RX7Q99572 595 aaKnown RBP26.74■■□□□ 1.87
SREBF1-208ENST00000469356 KIF2CQ99661 725 aa26.74■■□□□ 1.87
SREBF1-208ENST00000469356 FRMPD2Q68DX3 1309 aaPredicted RBP26.73■■□□□ 1.87
SREBF1-208ENST00000469356 TLR2O60603 784 aa26.73■■□□□ 1.87
SREBF1-208ENST00000469356 ZBED4O75132 1171 aa26.73■■□□□ 1.87
SREBF1-208ENST00000469356 CYP2C8P10632 490 aa26.73■■□□□ 1.87
SREBF1-208ENST00000469356 EVCP57679 992 aa26.73■■□□□ 1.87
SREBF1-208ENST00000469356 TOB2Q14106 344 aaPredicted RBP26.73■■□□□ 1.87
SREBF1-208ENST00000469356 SAMD1Q6SPF0 538 aaPredicted RBP26.73■■□□□ 1.87
SREBF1-208ENST00000469356 BTNL9Q6UXG8 535 aa26.73■■□□□ 1.87
SREBF1-208ENST00000469356 LBX2Q6XYB7 198 aa26.73■■□□□ 1.87
SREBF1-208ENST00000469356 MICU3Q86XE3 530 aa26.73■■□□□ 1.87
SREBF1-208ENST00000469356 KIFC2Q96AC6 838 aa26.73■■□□□ 1.87
SREBF1-208ENST00000469356 WBP1LQ9NX94 342 aa26.73■■□□□ 1.87
SREBF1-208ENST00000469356 AK2P54819 239 aa26.72■■□□□ 1.87
SREBF1-208ENST00000469356 FANCBQ8NB91 859 aa26.72■■□□□ 1.87
SREBF1-208ENST00000469356 BRPF3Q9ULD4 1205 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms