RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 CERS4Q9HA82 394 aa15.57■□□□□ 0.08
HDAC6-217ENST00000469223 SAP30BPQ9UHR5 308 aaKnown RBP15.57■□□□□ 0.08
HDAC6-217ENST00000469223 NRBP1Q9UHY1 535 aa15.57■□□□□ 0.08
HDAC6-217ENST00000469223 PALD1Q9ULE6 856 aa15.57■□□□□ 0.08
HDAC6-217ENST00000469223 MOXD2PA6NHM9 499 aa15.56■□□□□ 0.08
HDAC6-217ENST00000469223 RAB3GAP1Q15042 981 aa15.56■□□□□ 0.08
HDAC6-217ENST00000469223 NCAPG2Q86XI2 1143 aa15.56■□□□□ 0.08
HDAC6-217ENST00000469223 TGFBRAP1Q8WUH2 860 aa15.56■□□□□ 0.08
HDAC6-217ENST00000469223 AATFQ9NY61 560 aaKnown RBP eCLIP15.56■□□□□ 0.08
HDAC6-217ENST00000469223 PCDHA11Q9Y5I1 949 aa15.56■□□□□ 0.08
HDAC6-217ENST00000469223 NAV1Q8NEY1 1877 aa15.56■□□□□ 0.08
HDAC6-217ENST00000469223 CACNA1HO95180 2353 aa15.56■□□□□ 0.08
HDAC6-217ENST00000469223 PTPRSQ13332 1948 aa15.55■□□□□ 0.08
HDAC6-217ENST00000469223 UMODL1Q5DID0 1318 aa15.55■□□□□ 0.08
HDAC6-217ENST00000469223 MYADML2A6NDP7 307 aa15.55■□□□□ 0.08
HDAC6-217ENST00000469223 FGBP02675 491 aa15.55■□□□□ 0.08
HDAC6-217ENST00000469223 POU3F3P20264 500 aaPredicted RBP15.55■□□□□ 0.08
HDAC6-217ENST00000469223 PLS1Q14651 629 aa15.55■□□□□ 0.08
HDAC6-217ENST00000469223 KCNA10Q16322 511 aa15.55■□□□□ 0.08
HDAC6-217ENST00000469223 FOXP4Q8IVH2 680 aaPredicted RBP15.55■□□□□ 0.08
HDAC6-217ENST00000469223 ABRAQ8N0Z2 381 aa15.55■□□□□ 0.08
HDAC6-217ENST00000469223 CDCA7LQ96GN5 454 aa15.55■□□□□ 0.08
HDAC6-217ENST00000469223 GLT1D1Q96MS3 346 aa15.55■□□□□ 0.08
HDAC6-217ENST00000469223 TANGO6Q9C0B7 1094 aa15.55■□□□□ 0.08
HDAC6-217ENST00000469223 USP44Q9H0E7 712 aa15.55■□□□□ 0.08
HDAC6-217ENST00000469223 HMG20BQ9P0W2 317 aa15.55■□□□□ 0.08
HDAC6-217ENST00000469223 FBXO3Q9UK99 471 aa15.55■□□□□ 0.08
HDAC6-217ENST00000469223 ZBBXA8MT70 800 aa15.54■□□□□ 0.08
HDAC6-217ENST00000469223 HLA-DOAP06340 250 aa15.54■□□□□ 0.08
HDAC6-217ENST00000469223 CA3P07451 260 aa15.54■□□□□ 0.08
HDAC6-217ENST00000469223 ZNF865P0CJ78 1059 aaPredicted RBP15.54■□□□□ 0.08
HDAC6-217ENST00000469223 IL15P40933 162 aaPredicted RBP15.54■□□□□ 0.08
HDAC6-217ENST00000469223 TIMM10P62072 90 aa15.54■□□□□ 0.08
HDAC6-217ENST00000469223 FAM126BQ8IXS8 530 aa15.54■□□□□ 0.08
HDAC6-217ENST00000469223 MIER1Q8N108 512 aa15.54■□□□□ 0.08
HDAC6-217ENST00000469223 TINF2Q9BSI4 451 aa15.54■□□□□ 0.08
HDAC6-217ENST00000469223 MROH8Q9H579 483 aa15.54■□□□□ 0.08
HDAC6-217ENST00000469223 PA2G4Q9UQ80 394 aaKnown RBP15.54■□□□□ 0.08
HDAC6-217ENST00000469223 SLC4A7Q9Y6M7 1214 aa15.54■□□□□ 0.08
HDAC6-217ENST00000469223 ELP1O95163 1332 aa15.53■□□□□ 0.08
HDAC6-217ENST00000469223 CACNA1BQ00975 2339 aa15.53■□□□□ 0.08
HDAC6-217ENST00000469223 TLR3O15455 904 aaKnown RBP15.53■□□□□ 0.08
HDAC6-217ENST00000469223 PGK2P07205 417 aa15.53■□□□□ 0.08
HDAC6-217ENST00000469223 CDK7P50613 346 aa15.53■□□□□ 0.08
HDAC6-217ENST00000469223 IRX5P78411 483 aaPredicted RBP15.53■□□□□ 0.08
HDAC6-217ENST00000469223 SPATA5Q8NB90 893 aa15.53■□□□□ 0.08
HDAC6-217ENST00000469223 KLHDC9Q8NEP7 349 aa15.53■□□□□ 0.08
HDAC6-217ENST00000469223 XAGE2Q96GT9 111 aa15.53■□□□□ 0.08
HDAC6-217ENST00000469223 PHOX2BQ99453 314 aa15.53■□□□□ 0.08
HDAC6-217ENST00000469223 TANC1Q9C0D5 1861 aa15.52■□□□□ 0.08
HDAC6-217ENST00000469223 MYO15AQ9UKN7 3530 aa15.52■□□□□ 0.08
HDAC6-217ENST00000469223 A0A0U1RQG5 324 aaPredicted RBP15.52■□□□□ 0.08
HDAC6-217ENST00000469223 A0A1B0GUL7 405 aa15.52■□□□□ 0.08
HDAC6-217ENST00000469223 FCER1AP12319 257 aa15.52■□□□□ 0.08
HDAC6-217ENST00000469223 SSTR3P32745 418 aaPredicted RBP15.52■□□□□ 0.08
HDAC6-217ENST00000469223 MVPQ14764 893 aaKnown RBP15.52■□□□□ 0.08
HDAC6-217ENST00000469223 CCSAPQ6IQ19 270 aaPredicted RBP15.52■□□□□ 0.08
HDAC6-217ENST00000469223 ARNTL2Q8WYA1 636 aa15.52■□□□□ 0.08
HDAC6-217ENST00000469223 VTI1AQ96AJ9 217 aa15.52■□□□□ 0.08
HDAC6-217ENST00000469223 KCNH6Q9H252 994 aa15.52■□□□□ 0.08
HDAC6-217ENST00000469223 ARVCFO00192 962 aa15.51■□□□□ 0.07
HDAC6-217ENST00000469223 ATP2A2P16615 1042 aaKnown RBP15.51■□□□□ 0.07
HDAC6-217ENST00000469223 PLCG2P16885 1265 aa15.51■□□□□ 0.07
HDAC6-217ENST00000469223 COG2Q14746 738 aa15.51■□□□□ 0.07
HDAC6-217ENST00000469223 ATF7IPQ6VMQ6 1270 aa15.51■□□□□ 0.07
HDAC6-217ENST00000469223 GJD3Q8N144 294 aa15.51■□□□□ 0.07
HDAC6-217ENST00000469223 MMP19Q99542 508 aa15.51■□□□□ 0.07
HDAC6-217ENST00000469223 HIPK3Q9H422 1215 aa15.51■□□□□ 0.07
HDAC6-217ENST00000469223 CNPY2Q9Y2B0 182 aa15.51■□□□□ 0.07
HDAC6-217ENST00000469223 EPG5Q9HCE0 2579 aa15.51■□□□□ 0.07
HDAC6-217ENST00000469223 RIF1Q5UIP0 2472 aaKnown RBP15.5■□□□□ 0.07
HDAC6-217ENST00000469223 ARHGEF15O94989 841 aa15.5■□□□□ 0.07
HDAC6-217ENST00000469223 BAG3O95817 575 aa15.5■□□□□ 0.07
HDAC6-217ENST00000469223 ASGR1P07306 291 aa15.5■□□□□ 0.07
HDAC6-217ENST00000469223 C6orf222P0C671 652 aaPredicted RBP15.5■□□□□ 0.07
HDAC6-217ENST00000469223 ALADP13716 330 aa15.5■□□□□ 0.07
HDAC6-217ENST00000469223 CCL23P55773 120 aa15.5■□□□□ 0.07
HDAC6-217ENST00000469223 ABCB5Q2M3G0 1257 aa15.5■□□□□ 0.07
HDAC6-217ENST00000469223 TMEM67Q5HYA8 995 aa15.5■□□□□ 0.07
HDAC6-217ENST00000469223 NAA16Q6N069 864 aaPredicted RBP15.5■□□□□ 0.07
HDAC6-217ENST00000469223 ADGRA1Q86SQ6 560 aa15.5■□□□□ 0.07
HDAC6-217ENST00000469223 MB21D1Q8N884 522 aa15.5■□□□□ 0.07
HDAC6-217ENST00000469223 ANKS1AQ92625 1134 aa15.5■□□□□ 0.07
HDAC6-217ENST00000469223 LRP2BPQ9P2M1 347 aa15.5■□□□□ 0.07
HDAC6-217ENST00000469223 ZHX1Q9UKY1 873 aaPredicted RBP15.5■□□□□ 0.07
HDAC6-217ENST00000469223 PTPRZ1P23471 2315 aaPredicted RBP15.49■□□□□ 0.07
HDAC6-217ENST00000469223 CCER2I3L3R5 266 aa15.49■□□□□ 0.07
HDAC6-217ENST00000469223 CD4P01730 458 aa15.49■□□□□ 0.07
HDAC6-217ENST00000469223 CST5P28325 142 aaPredicted RBP15.49■□□□□ 0.07
HDAC6-217ENST00000469223 GRB10Q13322 594 aa15.49■□□□□ 0.07
HDAC6-217ENST00000469223 TATDN1Q6P1N9 297 aa15.49■□□□□ 0.07
HDAC6-217ENST00000469223 SAMD1Q6SPF0 538 aaPredicted RBP15.49■□□□□ 0.07
HDAC6-217ENST00000469223 FAM178BQ8IXR5 827 aa15.49■□□□□ 0.07
HDAC6-217ENST00000469223 ATG4CQ96DT6 458 aa15.49■□□□□ 0.07
HDAC6-217ENST00000469223 WNT8AQ9H1J5 351 aa15.49■□□□□ 0.07
HDAC6-217ENST00000469223 SIP14410 1827 aa15.49■□□□□ 0.07
HDAC6-217ENST00000469223 ST18O60284 1047 aa15.48■□□□□ 0.07
HDAC6-217ENST00000469223 CERKLQ49MI3 558 aaPredicted RBP15.48■□□□□ 0.07
HDAC6-217ENST00000469223 HOXC10Q9NYD6 342 aa15.48■□□□□ 0.07
HDAC6-217ENST00000469223 SALL2Q9Y467 1007 aaPredicted RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms