RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 LBHD1Q9BQE6 289 aaPredicted RBP14.77□□□□□ -0.05
HDAC3-204ENST00000469207 MROH8Q9H579 483 aa14.77□□□□□ -0.05
HDAC3-204ENST00000469207 LAMA2P24043 3122 aaKnown RBP14.77□□□□□ -0.05
HDAC3-204ENST00000469207 POTEB2H3BUK9 544 aa14.76□□□□□ -0.05
HDAC3-204ENST00000469207 WDR46O15213 610 aaKnown RBP14.76□□□□□ -0.05
HDAC3-204ENST00000469207 FAM47AQ5JRC9 791 aa14.76□□□□□ -0.05
HDAC3-204ENST00000469207 TSHZ3Q63HK5 1081 aa14.76□□□□□ -0.05
HDAC3-204ENST00000469207 MB21D1Q8N884 522 aa14.76□□□□□ -0.05
HDAC3-204ENST00000469207 ARRDC4Q8NCT1 418 aa14.76□□□□□ -0.05
HDAC3-204ENST00000469207 CCDC17Q96LX7 622 aa14.76□□□□□ -0.05
HDAC3-204ENST00000469207 NUP88Q99567 741 aaPredicted RBP14.76□□□□□ -0.05
HDAC3-204ENST00000469207 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.76□□□□□ -0.052e-6■■□□□ 13
HDAC3-204ENST00000469207 PRDM5Q9NQX1 630 aaPredicted RBP14.76□□□□□ -0.05
HDAC3-204ENST00000469207 ADAMTS5Q9UNA0 930 aa14.76□□□□□ -0.05
HDAC3-204ENST00000469207 SMCHD1A6NHR9 2005 aa14.76□□□□□ -0.05
HDAC3-204ENST00000469207 ZNFX1Q9P2E3 1918 aaKnown RBP14.75□□□□□ -0.05
HDAC3-204ENST00000469207 FCER1AP12319 257 aa14.75□□□□□ -0.05
HDAC3-204ENST00000469207 LRRC41Q15345 812 aa14.75□□□□□ -0.05
HDAC3-204ENST00000469207 SHHQ15465 462 aa14.75□□□□□ -0.05
HDAC3-204ENST00000469207 TRIM60Q495X7 471 aa14.75□□□□□ -0.05
HDAC3-204ENST00000469207 C9orf50Q5SZB4 431 aa14.75□□□□□ -0.05
HDAC3-204ENST00000469207 FAM83BQ5T0W9 1011 aa14.75□□□□□ -0.05
HDAC3-204ENST00000469207 LENG1Q96BZ8 264 aaPredicted RBP14.75□□□□□ -0.05
HDAC3-204ENST00000469207 MMP19Q99542 508 aa14.75□□□□□ -0.05
HDAC3-204ENST00000469207 KANSL2Q9H9L4 492 aa14.75□□□□□ -0.05
HDAC3-204ENST00000469207 STXBP5LQ9Y2K9 1186 aa14.75□□□□□ -0.05
HDAC3-204ENST00000469207 TRIM43BA6NCK2 446 aa14.74□□□□□ -0.05
HDAC3-204ENST00000469207 KBTBD13C9JR72 458 aa14.74□□□□□ -0.05
HDAC3-204ENST00000469207 VWA5AO00534 786 aa14.74□□□□□ -0.05
HDAC3-204ENST00000469207 STAT3P40763 770 aa14.74□□□□□ -0.05
HDAC3-204ENST00000469207 ABRAQ8N0Z2 381 aa14.74□□□□□ -0.05
HDAC3-204ENST00000469207 REPS2Q8NFH8 660 aa14.74□□□□□ -0.05
HDAC3-204ENST00000469207 BADQ92934 168 aa14.74□□□□□ -0.05
HDAC3-204ENST00000469207 TRIM43Q96BQ3 446 aaPredicted RBP14.74□□□□□ -0.05
HDAC3-204ENST00000469207 GUCD1Q96NT3 240 aa14.74□□□□□ -0.05
HDAC3-204ENST00000469207 STRBPQ96SI9 672 aaKnown RBP14.74□□□□□ -0.05
HDAC3-204ENST00000469207 LRRCC1Q9C099 1032 aa14.74□□□□□ -0.05
HDAC3-204ENST00000469207 SLC5A4Q9NY91 659 aa14.74□□□□□ -0.05
HDAC3-204ENST00000469207 PRKAG2Q9UGJ0 569 aa14.74□□□□□ -0.05
HDAC3-204ENST00000469207 RCAN3Q9UKA8 241 aa14.74□□□□□ -0.05
HDAC3-204ENST00000469207 RIPK3Q9Y572 518 aa14.74□□□□□ -0.05
HDAC3-204ENST00000469207 A0A0G2JMZ2 1700 aa14.74□□□□□ -0.05
HDAC3-204ENST00000469207 MYH8P13535 1937 aa14.73□□□□□ -0.05
HDAC3-204ENST00000469207 GSG1L2A8MUP6 293 aa14.73□□□□□ -0.05
HDAC3-204ENST00000469207 MINDY4BA8MYZ0 360 aa14.73□□□□□ -0.05
HDAC3-204ENST00000469207 PGK1P00558 417 aa14.73□□□□□ -0.05
HDAC3-204ENST00000469207 ITGB8P26012 769 aa14.73□□□□□ -0.05
HDAC3-204ENST00000469207 SLC4A3P48751 1232 aa14.73□□□□□ -0.05
HDAC3-204ENST00000469207 ZNF792Q3KQV3 632 aa14.73□□□□□ -0.05
HDAC3-204ENST00000469207 RIOX2Q8IUF8 465 aa14.73□□□□□ -0.05
HDAC3-204ENST00000469207 AMOTL1Q8IY63 956 aa14.73□□□□□ -0.05
HDAC3-204ENST00000469207 OSBP2Q969R2 916 aa14.73□□□□□ -0.05
HDAC3-204ENST00000469207 TINF2Q9BSI4 451 aa14.73□□□□□ -0.05
HDAC3-204ENST00000469207 SH2D4AQ9H788 454 aa14.73□□□□□ -0.05
HDAC3-204ENST00000469207 ZNF214Q9UL59 606 aaPredicted RBP14.73□□□□□ -0.05
HDAC3-204ENST00000469207 PPP1R9AQ9ULJ8 1098 aa14.73□□□□□ -0.05
HDAC3-204ENST00000469207 COL11A1P12107 1806 aaPredicted RBP14.73□□□□□ -0.05
HDAC3-204ENST00000469207 PARP14Q460N5 1801 aa14.72□□□□□ -0.05
HDAC3-204ENST00000469207 SLC25A27O95847 323 aa14.72□□□□□ -0.05
HDAC3-204ENST00000469207 ZNF865P0CJ78 1059 aaPredicted RBP14.72□□□□□ -0.05
HDAC3-204ENST00000469207 RASA1P20936 1047 aa14.72□□□□□ -0.05
HDAC3-204ENST00000469207 IRX5P78411 483 aaPredicted RBP14.72□□□□□ -0.05
HDAC3-204ENST00000469207 TLE2Q04725 743 aa14.72□□□□□ -0.05
HDAC3-204ENST00000469207 DDRGK1Q96HY6 314 aa14.72□□□□□ -0.05
HDAC3-204ENST00000469207 GOPCQ9HD26 462 aa14.72□□□□□ -0.05
HDAC3-204ENST00000469207 PDLIM7Q9NR12 457 aa14.72□□□□□ -0.05
HDAC3-204ENST00000469207 ZNF236Q9UL36 1845 aa14.71□□□□□ -0.05
HDAC3-204ENST00000469207 F5H6K3 240 aa14.71□□□□□ -0.05
HDAC3-204ENST00000469207 PRDM1O75626 825 aa14.71□□□□□ -0.05
HDAC3-204ENST00000469207 KLRC3Q07444 240 aa14.71□□□□□ -0.05
HDAC3-204ENST00000469207 KCTD2Q14681 263 aa14.71□□□□□ -0.05
HDAC3-204ENST00000469207 SNX17Q15036 470 aa14.71□□□□□ -0.05
HDAC3-204ENST00000469207 ZSCAN25Q6NSZ9 544 aa14.71□□□□□ -0.05
HDAC3-204ENST00000469207 CHMP4CQ96CF2 233 aa14.71□□□□□ -0.05
HDAC3-204ENST00000469207 MKNK2Q9HBH9 465 aa14.71□□□□□ -0.05
HDAC3-204ENST00000469207 XPNPEP3Q9NQH7 507 aa14.71□□□□□ -0.05
HDAC3-204ENST00000469207 ECHDC1Q9NTX5 307 aa14.71□□□□□ -0.05
HDAC3-204ENST00000469207 CLIP2Q9UDT6 1046 aa14.71□□□□□ -0.05
HDAC3-204ENST00000469207 M0R2C6 588 aa14.7□□□□□ -0.06
HDAC3-204ENST00000469207 RARBP10826 455 aa14.7□□□□□ -0.06
HDAC3-204ENST00000469207 EPHB4P54760 987 aa14.7□□□□□ -0.06
HDAC3-204ENST00000469207 SBK1Q52WX2 424 aa14.7□□□□□ -0.06
HDAC3-204ENST00000469207 CPXCR1Q8N123 301 aa14.7□□□□□ -0.06
HDAC3-204ENST00000469207 SEC62Q99442 399 aaKnown RBP14.7□□□□□ -0.06
HDAC3-204ENST00000469207 EPB41L4AQ9HCS5 686 aaPredicted RBP14.7□□□□□ -0.06
HDAC3-204ENST00000469207 UNC80Q8N2C7 3258 aa14.69□□□□□ -0.06
HDAC3-204ENST00000469207 SNAI1O95863 264 aaPredicted RBP14.69□□□□□ -0.06
HDAC3-204ENST00000469207 NDUFB10O96000 172 aa14.69□□□□□ -0.06
HDAC3-204ENST00000469207 SNRNP48Q6IEG0 339 aaKnown RBP14.69□□□□□ -0.06
HDAC3-204ENST00000469207 KBTBD3Q8NAB2 608 aa14.69□□□□□ -0.06
HDAC3-204ENST00000469207 SLF1Q9BQI6 1058 aa14.69□□□□□ -0.06
HDAC3-204ENST00000469207 RAVER2Q9HCJ3 691 aaKnown RBP14.69□□□□□ -0.06
HDAC3-204ENST00000469207 NYAP2Q9P242 653 aa14.69□□□□□ -0.06
HDAC3-204ENST00000469207 ARPP21Q9UBL0 812 aaPredicted RBP14.69□□□□□ -0.06
HDAC3-204ENST00000469207 PHF24Q9UPV7 400 aa14.69□□□□□ -0.06
HDAC3-204ENST00000469207 LTBP2Q14767 1821 aa14.69□□□□□ -0.06
HDAC3-204ENST00000469207 A0A1W2PQ45 241 aaPredicted RBP14.68□□□□□ -0.06
HDAC3-204ENST00000469207 A0A1W2PQY0 241 aa14.68□□□□□ -0.06
HDAC3-204ENST00000469207 RNF113AO15541 343 aaKnown RBP14.68□□□□□ -0.06
HDAC3-204ENST00000469207 PQBP1O60828 265 aaKnown RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms