RNA–Protein interactions for RNA: ENST00000469154.5

SMARCD3-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-205ENST00000469154 VPS54Q9P1Q0 977 aa16.12■□□□□ 0.17
SMARCD3-205ENST00000469154 ANKRD31Q8N7Z5 1873 aa16.12■□□□□ 0.17
SMARCD3-205ENST00000469154 WTIPA6NIX2 430 aaPredicted RBP16.11■□□□□ 0.17
SMARCD3-205ENST00000469154 CCDC175P0C221 793 aa16.11■□□□□ 0.17
SMARCD3-205ENST00000469154 PKN1Q16512 942 aa16.11■□□□□ 0.17
SMARCD3-205ENST00000469154 KIFC2Q96AC6 838 aa16.11■□□□□ 0.17
SMARCD3-205ENST00000469154 CTAGE1Q96RT6 745 aa16.11■□□□□ 0.17
SMARCD3-205ENST00000469154 WDR24Q96S15 920 aa16.11■□□□□ 0.17
SMARCD3-205ENST00000469154 GNL3LQ9NVN8 582 aaKnown RBP16.11■□□□□ 0.17
SMARCD3-205ENST00000469154 GOLGB1Q14789 3259 aaKnown RBP16.11■□□□□ 0.17
SMARCD3-205ENST00000469154 PCP11498 1178 aaKnown RBP16.11■□□□□ 0.17
SMARCD3-205ENST00000469154 PPP2R3AQ06190 1150 aa16.11■□□□□ 0.17
SMARCD3-205ENST00000469154 CUL4BQ13620 913 aa16.11■□□□□ 0.17
SMARCD3-205ENST00000469154 PPFIBP1Q86W92 1011 aa16.11■□□□□ 0.17
SMARCD3-205ENST00000469154 ENAHQ8N8S7 591 aaPredicted RBP16.11■□□□□ 0.17
SMARCD3-205ENST00000469154 PAGE5Q96GU1 130 aa16.11■□□□□ 0.17
SMARCD3-205ENST00000469154 GSDMAQ96QA5 445 aa16.11■□□□□ 0.17
SMARCD3-205ENST00000469154 ZNF804BA4D1E1 1349 aa16.11■□□□□ 0.17
SMARCD3-205ENST00000469154 FUT2Q10981 343 aa16.1■□□□□ 0.17
SMARCD3-205ENST00000469154 FILIP1LQ4L180 1135 aa16.1■□□□□ 0.17
SMARCD3-205ENST00000469154 IFIT1BQ5T764 474 aaKnown RBP16.1■□□□□ 0.17
SMARCD3-205ENST00000469154 CDKAL1Q5VV42 579 aa16.1■□□□□ 0.17
SMARCD3-205ENST00000469154 GPR161Q8N6U8 529 aaKnown RBP16.1■□□□□ 0.17
SMARCD3-205ENST00000469154 SDR42E1Q8WUS8 393 aa16.1■□□□□ 0.17
SMARCD3-205ENST00000469154 SYMPKQ92797 1274 aaKnown RBP16.1■□□□□ 0.17
SMARCD3-205ENST00000469154 SHISA4Q96DD7 197 aa16.1■□□□□ 0.17
SMARCD3-205ENST00000469154 A0A087X0B3 334 aa16.1■□□□□ 0.17
SMARCD3-205ENST00000469154 FAM205CA6NFA0 338 aa16.1■□□□□ 0.17
SMARCD3-205ENST00000469154 NPR1P16066 1061 aa16.1■□□□□ 0.17
SMARCD3-205ENST00000469154 APTXQ7Z2E3 356 aaKnown RBP16.1■□□□□ 0.17
SMARCD3-205ENST00000469154 ADGRA1Q86SQ6 560 aa16.1■□□□□ 0.17
SMARCD3-205ENST00000469154 C2CD5Q86YS7 1000 aa16.1■□□□□ 0.17
SMARCD3-205ENST00000469154 CRAMP1Q96RY5 1269 aa16.1■□□□□ 0.17
SMARCD3-205ENST00000469154 MTFR1LQ9H019 292 aa16.1■□□□□ 0.17
SMARCD3-205ENST00000469154 DDAH1O94760 285 aa16.09■□□□□ 0.17
SMARCD3-205ENST00000469154 AFMP43652 599 aa16.09■□□□□ 0.17
SMARCD3-205ENST00000469154 DPYDQ12882 1025 aa16.09■□□□□ 0.17
SMARCD3-205ENST00000469154 ZNF622Q969S3 477 aaKnown RBP eCLIP16.09■□□□□ 0.17
SMARCD3-205ENST00000469154 EPSTI1Q96J88 318 aa16.09■□□□□ 0.17
SMARCD3-205ENST00000469154 CHRNA5P30532 468 aa16.09■□□□□ 0.17
SMARCD3-205ENST00000469154 PBX1P40424 430 aa16.09■□□□□ 0.17
SMARCD3-205ENST00000469154 PLA2G4AP47712 749 aa16.09■□□□□ 0.17
SMARCD3-205ENST00000469154 RSRC2Q7L4I2 434 aaKnown RBP16.09■□□□□ 0.17
SMARCD3-205ENST00000469154 IQCA1Q86XH1 822 aa16.09■□□□□ 0.17
SMARCD3-205ENST00000469154 IGSF22Q8N9C0 903 aa16.09■□□□□ 0.17
SMARCD3-205ENST00000469154 PYM1Q9BRP8 204 aaKnown RBP16.09■□□□□ 0.17
SMARCD3-205ENST00000469154 RIOK1Q9BRS2 568 aaKnown RBP16.09■□□□□ 0.17
SMARCD3-205ENST00000469154 DESI2Q9BSY9 194 aa16.09■□□□□ 0.17
SMARCD3-205ENST00000469154 ABCF2Q9UG63 623 aa16.09■□□□□ 0.17
SMARCD3-205ENST00000469154 ITIH6Q6UXX5 1313 aa16.08■□□□□ 0.17
SMARCD3-205ENST00000469154 H0YIN7 160 aa16.08■□□□□ 0.17
SMARCD3-205ENST00000469154 BBOX1O75936 387 aa16.08■□□□□ 0.17
SMARCD3-205ENST00000469154 CD44P16070 742 aaKnown RBP16.08■□□□□ 0.17
SMARCD3-205ENST00000469154 TTC38Q5R3I4 469 aa16.08■□□□□ 0.17
SMARCD3-205ENST00000469154 KLHL10Q6JEL2 608 aa16.08■□□□□ 0.17
SMARCD3-205ENST00000469154 RABGGTAQ92696 567 aa16.08■□□□□ 0.17
SMARCD3-205ENST00000469154 GOLGA1Q92805 767 aa16.08■□□□□ 0.17
SMARCD3-205ENST00000469154 CCDC51Q96ER9 411 aa16.08■□□□□ 0.17
SMARCD3-205ENST00000469154 MASTLQ96GX5 879 aa16.08■□□□□ 0.17
SMARCD3-205ENST00000469154 ADD3Q9UEY8 706 aaKnown RBP16.08■□□□□ 0.17
SMARCD3-205ENST00000469154 MYH8P13535 1937 aa16.08■□□□□ 0.16
SMARCD3-205ENST00000469154 COL1A1P02452 1464 aaPredicted RBP16.08■□□□□ 0.16
SMARCD3-205ENST00000469154 CCDC66A2RUB6 948 aa16.08■□□□□ 0.16
SMARCD3-205ENST00000469154 TEX33O43247 280 aa16.08■□□□□ 0.16
SMARCD3-205ENST00000469154 PLEKHA8P1O95397 391 aa16.08■□□□□ 0.16
SMARCD3-205ENST00000469154 KARSQ15046 597 aaKnown RBP16.08■□□□□ 0.16
SMARCD3-205ENST00000469154 EARS2Q5JPH6 523 aaKnown RBP16.08■□□□□ 0.16
SMARCD3-205ENST00000469154 CCDC12Q8WUD4 166 aaPredicted RBP16.08■□□□□ 0.16
SMARCD3-205ENST00000469154 TNFRSF25Q93038 417 aa16.08■□□□□ 0.16
SMARCD3-205ENST00000469154 MRPL44Q9H9J2 332 aaKnown RBP16.08■□□□□ 0.16
SMARCD3-205ENST00000469154 ST7Q9NRC1 585 aa16.08■□□□□ 0.16
SMARCD3-205ENST00000469154 ANKIB1Q9P2G1 1089 aa16.08■□□□□ 0.16
SMARCD3-205ENST00000469154 V9GY48 417 aaPredicted RBP16.08■□□□□ 0.16
SMARCD3-205ENST00000469154 MAST2Q6P0Q8 1798 aa16.07■□□□□ 0.16
SMARCD3-205ENST00000469154 PRDM1O75626 825 aa16.07■□□□□ 0.16
SMARCD3-205ENST00000469154 FGRP09769 529 aa16.07■□□□□ 0.16
SMARCD3-205ENST00000469154 ATP2C1P98194 919 aaPredicted RBP16.07■□□□□ 0.16
SMARCD3-205ENST00000469154 RBL2Q08999 1139 aa16.07■□□□□ 0.16
SMARCD3-205ENST00000469154 TEX35Q5T0J7 233 aa16.07■□□□□ 0.16
SMARCD3-205ENST00000469154 JAKMIP3Q5VZ66 844 aa16.07■□□□□ 0.16
SMARCD3-205ENST00000469154 TMTC3Q6ZXV5 915 aa16.07■□□□□ 0.16
SMARCD3-205ENST00000469154 ANKRD2Q9GZV1 360 aa16.07■□□□□ 0.16
SMARCD3-205ENST00000469154 ADGRG1Q9Y653 693 aa16.07■□□□□ 0.16
SMARCD3-205ENST00000469154 SOWAHDA6NJG2 315 aa16.07■□□□□ 0.16
SMARCD3-205ENST00000469154 PPP1R3GB7ZBB8 358 aa16.07■□□□□ 0.16
SMARCD3-205ENST00000469154 MFAP3LO75121 409 aa16.07■□□□□ 0.16
SMARCD3-205ENST00000469154 POLD1P28340 1107 aa16.07■□□□□ 0.16
SMARCD3-205ENST00000469154 STX17P56962 302 aa16.07■□□□□ 0.16
SMARCD3-205ENST00000469154 CNGA4Q8IV77 575 aa16.07■□□□□ 0.16
SMARCD3-205ENST00000469154 IQSEC3Q9UPP2 1182 aaPredicted RBP16.07■□□□□ 0.16
SMARCD3-205ENST00000469154 CNTNAP5Q8WYK1 1306 aa16.06■□□□□ 0.16
SMARCD3-205ENST00000469154 ALDH1B1P30837 517 aa16.06■□□□□ 0.16
SMARCD3-205ENST00000469154 TRAPPC10P48553 1259 aa16.06■□□□□ 0.16
SMARCD3-205ENST00000469154 TROAPQ12815 778 aa16.06■□□□□ 0.16
SMARCD3-205ENST00000469154 UBE4AQ14139 1066 aa16.06■□□□□ 0.16
SMARCD3-205ENST00000469154 MTF1Q14872 753 aa16.06■□□□□ 0.16
SMARCD3-205ENST00000469154 CC2D1AQ6P1N0 951 aaPredicted RBP16.06■□□□□ 0.16
SMARCD3-205ENST00000469154 PPEF1O14829 653 aaPredicted RBP16.06■□□□□ 0.16
SMARCD3-205ENST00000469154 FECHP22830 423 aa16.06■□□□□ 0.16
SMARCD3-205ENST00000469154 TUBB2AQ13885 445 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms