RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 MYLIPQ8WY64 445 aa7.94□□□□□ -1.14
LSM5-209ENST00000468872 LOC105371045A0A1W2PR82 267 aa7.93□□□□□ -1.14
LSM5-209ENST00000468872 DBX1A6NMT0 343 aa7.93□□□□□ -1.14
LSM5-209ENST00000468872 UBOX5O94941 541 aa7.93□□□□□ -1.14
LSM5-209ENST00000468872 RAG1P15918 1043 aa7.93□□□□□ -1.14
LSM5-209ENST00000468872 CHMP4BP1P59074 171 aa7.93□□□□□ -1.14
LSM5-209ENST00000468872 BHLHE22Q8NFJ8 381 aaPredicted RBP7.93□□□□□ -1.14
LSM5-209ENST00000468872 DHX38Q92620 1227 aaKnown RBP7.93□□□□□ -1.14
LSM5-209ENST00000468872 EHMT1Q9H9B1 1298 aa7.93□□□□□ -1.14
LSM5-209ENST00000468872 GINM1Q9NU53 330 aa7.93□□□□□ -1.14
LSM5-209ENST00000468872 ZGLP1P0C6A0 271 aa7.92□□□□□ -1.14
LSM5-209ENST00000468872 ATP2B1P20020 1258 aa7.92□□□□□ -1.14
LSM5-209ENST00000468872 APOBRQ0VD83 1088 aa7.92□□□□□ -1.14
LSM5-209ENST00000468872 SEZ6Q53EL9 994 aa7.92□□□□□ -1.14
LSM5-209ENST00000468872 OVOS1Q6IE37 1185 aa7.92□□□□□ -1.14
LSM5-209ENST00000468872 SEC16BQ96JE7 1060 aa7.92□□□□□ -1.14
LSM5-209ENST00000468872 EFR3BQ9Y2G0 817 aa7.92□□□□□ -1.14
LSM5-209ENST00000468872 GTF2F1P35269 517 aaKnown RBP eCLIP7.91□□□□□ -1.14
LSM5-209ENST00000468872 NASPP49321 788 aaPredicted RBP7.91□□□□□ -1.14
LSM5-209ENST00000468872 CLCQ05315 142 aa7.91□□□□□ -1.14
LSM5-209ENST00000468872 CLEC16AQ2KHT3 1053 aa7.91□□□□□ -1.14
LSM5-209ENST00000468872 CDCP2Q5VXM1 449 aa7.91□□□□□ -1.14
LSM5-209ENST00000468872 SLITRK4Q8IW52 837 aa7.91□□□□□ -1.14
LSM5-209ENST00000468872 PDZD8Q8NEN9 1154 aa7.91□□□□□ -1.14
LSM5-209ENST00000468872 SPATA32Q96LK8 384 aa7.91□□□□□ -1.14
LSM5-209ENST00000468872 DIRC2Q96SL1 478 aa7.91□□□□□ -1.14
LSM5-209ENST00000468872 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.91□□□□□ -1.14
LSM5-209ENST00000468872 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.91□□□□□ -1.14
LSM5-209ENST00000468872 SP110Q9HB58 689 aa7.91□□□□□ -1.14
LSM5-209ENST00000468872 KRTAP4-8A0A0G2JLE6 195 aa7.9□□□□□ -1.14
LSM5-209ENST00000468872 POLR2BP30876 1174 aaKnown RBP7.9□□□□□ -1.14
LSM5-209ENST00000468872 TRHRP34981 398 aaPredicted RBP7.9□□□□□ -1.14
LSM5-209ENST00000468872 SOX9P48436 509 aa7.9□□□□□ -1.14
LSM5-209ENST00000468872 RNF4P78317 190 aa7.9□□□□□ -1.14
LSM5-209ENST00000468872 GK5Q6ZS86 529 aa7.9□□□□□ -1.14
LSM5-209ENST00000468872 REXO1Q8N1G1 1221 aaKnown RBP7.9□□□□□ -1.14
LSM5-209ENST00000468872 NKD1Q969G9 470 aa7.9□□□□□ -1.14
LSM5-209ENST00000468872 NSUN3Q9H649 340 aaKnown RBP7.9□□□□□ -1.14
LSM5-209ENST00000468872 CNNM2Q9H8M5 875 aa7.9□□□□□ -1.14
LSM5-209ENST00000468872 TEKQ02763 1124 aa7.89□□□□□ -1.15
LSM5-209ENST00000468872 NMIQ13287 307 aaPredicted RBP7.89□□□□□ -1.15
LSM5-209ENST00000468872 SYDE1Q6ZW31 735 aaPredicted RBP7.89□□□□□ -1.15
LSM5-209ENST00000468872 OXR1Q8N573 874 aa7.89□□□□□ -1.15
LSM5-209ENST00000468872 ENOX1Q8TC92 643 aaKnown RBP7.89□□□□□ -1.15
LSM5-209ENST00000468872 ARMC5Q96C12 935 aa7.89□□□□□ -1.15
LSM5-209ENST00000468872 SYTL4Q96C24 671 aaPredicted RBP7.89□□□□□ -1.15
LSM5-209ENST00000468872 ATG4CQ96DT6 458 aa7.89□□□□□ -1.15
LSM5-209ENST00000468872 PPP1R16BQ96T49 567 aa7.89□□□□□ -1.15
LSM5-209ENST00000468872 DNAJC2Q99543 621 aaKnown RBP7.89□□□□□ -1.15
LSM5-209ENST00000468872 ASCC2Q9H1I8 757 aaPredicted RBP7.89□□□□□ -1.15
LSM5-209ENST00000468872 C19orf44Q9H6X5 657 aa7.89□□□□□ -1.15
LSM5-209ENST00000468872 TSPAN15O95858 294 aa7.88□□□□□ -1.15
LSM5-209ENST00000468872 MCM4P33991 863 aa7.88□□□□□ -1.15
LSM5-209ENST00000468872 COL9A2Q14055 689 aaPredicted RBP7.88□□□□□ -1.15
LSM5-209ENST00000468872 TIGD5Q53EQ6 642 aa7.88□□□□□ -1.15
LSM5-209ENST00000468872 NBPF12Q5TAG4 269 aaPredicted RBP7.88□□□□□ -1.15
LSM5-209ENST00000468872 NLRC3Q7RTR2 1065 aa7.88□□□□□ -1.15
LSM5-209ENST00000468872 FBXO15Q8NCQ5 510 aaPredicted RBP7.88□□□□□ -1.15
LSM5-209ENST00000468872 SYTL5Q8TDW5 730 aaPredicted RBP7.88□□□□□ -1.15
LSM5-209ENST00000468872 HDAC8Q9BY41 377 aa7.88□□□□□ -1.15
LSM5-209ENST00000468872 RNF32Q9H0A6 362 aa7.88□□□□□ -1.15
LSM5-209ENST00000468872 FITM1A5D6W6 292 aa7.87□□□□□ -1.15
LSM5-209ENST00000468872 RAP1GAPP47736 663 aa7.87□□□□□ -1.15
LSM5-209ENST00000468872 ZNF165P49910 485 aa7.87□□□□□ -1.15
LSM5-209ENST00000468872 LILRA2Q8N149 483 aa7.87□□□□□ -1.15
LSM5-209ENST00000468872 ANTXR1Q9H6X2 564 aa7.87□□□□□ -1.15
LSM5-209ENST00000468872 KCNK12Q9HB15 430 aa7.87□□□□□ -1.15
LSM5-209ENST00000468872 DCP1AQ9NPI6 582 aaPredicted RBP7.87□□□□□ -1.15
LSM5-209ENST00000468872 EBF1Q9UH73 591 aa7.87□□□□□ -1.15
LSM5-209ENST00000468872 ZNF281Q9Y2X9 895 aa7.87□□□□□ -1.15
LSM5-209ENST00000468872 DUSP4Q13115 394 aa7.86□□□□□ -1.15
LSM5-209ENST00000468872 NR0B2Q15466 257 aa7.86□□□□□ -1.15
LSM5-209ENST00000468872 NBPF9Q3BBW0 867 aa7.86□□□□□ -1.15
LSM5-209ENST00000468872 TMC3Q7Z5M5 1100 aa7.86□□□□□ -1.15
LSM5-209ENST00000468872 CILP2Q8IUL8 1156 aa7.86□□□□□ -1.15
LSM5-209ENST00000468872 DAGLBQ8NCG7 672 aa7.86□□□□□ -1.15
LSM5-209ENST00000468872 EPB41L4BQ9H329 900 aa7.86□□□□□ -1.15
LSM5-209ENST00000468872 ARID1BQ8NFD5 2236 aaPredicted RBP7.86□□□□□ -1.15
LSM5-209ENST00000468872 MEIS3P2A8K0S8 358 aa7.85□□□□□ -1.15
LSM5-209ENST00000468872 CLEC3AO75596 197 aa7.85□□□□□ -1.15
LSM5-209ENST00000468872 KRT1P04264 644 aa7.85□□□□□ -1.15
LSM5-209ENST00000468872 SSBP05455 408 aaKnown RBP eCLIP7.85□□□□□ -1.15
LSM5-209ENST00000468872 NME1P15531 152 aaKnown RBP7.85□□□□□ -1.15
LSM5-209ENST00000468872 CCNFP41002 786 aa7.85□□□□□ -1.15
LSM5-209ENST00000468872 RBL2Q08999 1139 aa7.85□□□□□ -1.15
LSM5-209ENST00000468872 SNW1Q13573 536 aaKnown RBP7.85□□□□□ -1.15
LSM5-209ENST00000468872 LRRFIP1Q32MZ4 808 aaKnown RBP7.85□□□□□ -1.15
LSM5-209ENST00000468872 RNF111Q6ZNA4 994 aa7.85□□□□□ -1.15
LSM5-209ENST00000468872 USHBP1Q8N6Y0 703 aa7.85□□□□□ -1.15
LSM5-209ENST00000468872 LINC01599Q8WXQ3 324 aa7.85□□□□□ -1.15
LSM5-209ENST00000468872 STRIP2Q9ULQ0 834 aa7.85□□□□□ -1.15
LSM5-209ENST00000468872 PPT2Q9UMR5 302 aa7.85□□□□□ -1.15
LSM5-209ENST00000468872 STK10O94804 968 aaKnown RBP7.84□□□□□ -1.15
LSM5-209ENST00000468872 CHRNEQ04844 493 aa7.84□□□□□ -1.15
LSM5-209ENST00000468872 CCDC81Q6ZN84 652 aa7.84□□□□□ -1.15
LSM5-209ENST00000468872 SPPL2CQ8IUH8 684 aa7.84□□□□□ -1.15
LSM5-209ENST00000468872 TMEM192Q8IY95 271 aa7.84□□□□□ -1.15
LSM5-209ENST00000468872 ZNF655Q8N720 491 aaPredicted RBP7.84□□□□□ -1.15
LSM5-209ENST00000468872 ANKS4BQ8N8V4 417 aa7.84□□□□□ -1.15
LSM5-209ENST00000468872 TCTN2Q96GX1 697 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms