RNA–Protein interactions for RNA: ENST00000468822.5

SRRM1-207, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 768 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-207ENST00000468822 MB21D1Q8N884 522 aa18.72■□□□□ 0.59
SRRM1-207ENST00000468822 LENG1Q96BZ8 264 aaPredicted RBP18.72■□□□□ 0.59
SRRM1-207ENST00000468822 FBXO28Q9NVF7 368 aa18.72■□□□□ 0.59
SRRM1-207ENST00000468822 CYP2D7A0A087X1C5 515 aa18.71■□□□□ 0.59
SRRM1-207ENST00000468822 PGK1P00558 417 aa18.71■□□□□ 0.59
SRRM1-207ENST00000468822 VCPKMTQ9H867 229 aa18.71■□□□□ 0.59
SRRM1-207ENST00000468822 ARMT1Q9H993 441 aa18.71■□□□□ 0.59
SRRM1-207ENST00000468822 XPNPEP3Q9NQH7 507 aa18.71■□□□□ 0.59
SRRM1-207ENST00000468822 TMX2Q9Y320 296 aa18.71■□□□□ 0.59
SRRM1-207ENST00000468822 GOLIM4O00461 696 aa18.7■□□□□ 0.58
SRRM1-207ENST00000468822 CHGBP05060 677 aa18.7■□□□□ 0.58
SRRM1-207ENST00000468822 FCER1AP12319 257 aa18.7■□□□□ 0.58
SRRM1-207ENST00000468822 ICA1Q05084 483 aa18.7■□□□□ 0.58
SRRM1-207ENST00000468822 FTSJ3Q8IY81 847 aaKnown RBP18.7■□□□□ 0.58
SRRM1-207ENST00000468822 SLC5A4Q9NY91 659 aa18.7■□□□□ 0.58
SRRM1-207ENST00000468822 ADAMTS5Q9UNA0 930 aa18.7■□□□□ 0.58
SRRM1-207ENST00000468822 ZNFX1Q9P2E3 1918 aaKnown RBP18.7■□□□□ 0.58
SRRM1-207ENST00000468822 COL11A1P12107 1806 aaPredicted RBP18.7■□□□□ 0.58
SRRM1-207ENST00000468822 CCER2I3L3R5 266 aa18.69■□□□□ 0.58
SRRM1-207ENST00000468822 CLTBP09497 229 aa18.69■□□□□ 0.58
SRRM1-207ENST00000468822 ZNF865P0CJ78 1059 aaPredicted RBP18.69■□□□□ 0.58
SRRM1-207ENST00000468822 FOSL2P15408 326 aa18.69■□□□□ 0.58
SRRM1-207ENST00000468822 ZNF792Q3KQV3 632 aa18.69■□□□□ 0.58
SRRM1-207ENST00000468822 USP38Q8NB14 1042 aa18.69■□□□□ 0.58
SRRM1-207ENST00000468822 TACC3Q9Y6A5 838 aa18.69■□□□□ 0.58
SRRM1-207ENST00000468822 CHD7Q9P2D1 2997 aa18.69■□□□□ 0.58
SRRM1-207ENST00000468822 A0A1W2PQ45 241 aaPredicted RBP18.68■□□□□ 0.58
SRRM1-207ENST00000468822 A0A1W2PQY0 241 aa18.68■□□□□ 0.58
SRRM1-207ENST00000468822 KIAA0355O15063 1070 aa18.68■□□□□ 0.58
SRRM1-207ENST00000468822 PQBP1O60828 265 aaKnown RBP18.68■□□□□ 0.58
SRRM1-207ENST00000468822 RARBP10826 455 aa18.68■□□□□ 0.58
SRRM1-207ENST00000468822 TTF1Q15361 905 aaPredicted RBP18.68■□□□□ 0.58
SRRM1-207ENST00000468822 RHPN1Q8TCX5 695 aa18.68■□□□□ 0.58
SRRM1-207ENST00000468822 RNPC3Q96LT9 517 aaKnown RBP18.68■□□□□ 0.58
SRRM1-207ENST00000468822 MMP19Q99542 508 aa18.68■□□□□ 0.58
SRRM1-207ENST00000468822 DNAJC2Q99543 621 aaKnown RBP18.68■□□□□ 0.58
SRRM1-207ENST00000468822 TINF2Q9BSI4 451 aa18.68■□□□□ 0.58
SRRM1-207ENST00000468822 SWAP70Q9UH65 585 aa18.68■□□□□ 0.58
SRRM1-207ENST00000468822 WDR46O15213 610 aaKnown RBP18.67■□□□□ 0.58
SRRM1-207ENST00000468822 ADAMTS4O75173 837 aa18.67■□□□□ 0.58
SRRM1-207ENST00000468822 GRIN2CQ14957 1233 aa18.67■□□□□ 0.58
SRRM1-207ENST00000468822 ERC1Q8IUD2 1116 aa18.67■□□□□ 0.58
SRRM1-207ENST00000468822 RIOX2Q8IUF8 465 aa18.67■□□□□ 0.58
SRRM1-207ENST00000468822 REPS2Q8NFH8 660 aa18.67■□□□□ 0.58
SRRM1-207ENST00000468822 ARHGEF10LQ9HCE6 1279 aa18.67■□□□□ 0.58
SRRM1-207ENST00000468822 NRBP1Q9UHY1 535 aa18.67■□□□□ 0.58
SRRM1-207ENST00000468822 ZNF214Q9UL59 606 aaPredicted RBP18.67■□□□□ 0.58
SRRM1-207ENST00000468822 ROBO3Q96MS0 1386 aa18.67■□□□□ 0.58
SRRM1-207ENST00000468822 BAZ2AQ9UIF9 1905 aaKnown RBP18.66■□□□□ 0.58
SRRM1-207ENST00000468822 MBD4O95243 580 aa18.66■□□□□ 0.58
SRRM1-207ENST00000468822 SLC25A27O95847 323 aa18.66■□□□□ 0.58
SRRM1-207ENST00000468822 EEF2P13639 858 aaKnown RBP18.66■□□□□ 0.58
SRRM1-207ENST00000468822 CDK8P49336 464 aa18.66■□□□□ 0.58
SRRM1-207ENST00000468822 IRX5P78411 483 aaPredicted RBP18.66■□□□□ 0.58
SRRM1-207ENST00000468822 FAAP100Q0VG06 881 aa18.66■□□□□ 0.58
SRRM1-207ENST00000468822 PRDM6Q9NQX0 595 aa18.66■□□□□ 0.58
SRRM1-207ENST00000468822 REV3LO60673 3130 aa18.66■□□□□ 0.58
SRRM1-207ENST00000468822 XIRP2A4UGR9 3374 aa18.65■□□□□ 0.58
SRRM1-207ENST00000468822 PLXNA1Q9UIW2 1896 aa18.65■□□□□ 0.58
SRRM1-207ENST00000468822 MYH8P13535 1937 aa18.65■□□□□ 0.58
SRRM1-207ENST00000468822 APBB1O00213 710 aa18.65■□□□□ 0.58
SRRM1-207ENST00000468822 VWA5AO00534 786 aa18.65■□□□□ 0.58
SRRM1-207ENST00000468822 RAG1P15918 1043 aa18.65■□□□□ 0.58
SRRM1-207ENST00000468822 C12orf60Q5U649 245 aa18.65■□□□□ 0.58
SRRM1-207ENST00000468822 RNF180Q86T96 592 aa18.65■□□□□ 0.58
SRRM1-207ENST00000468822 PANK1Q8TE04 598 aa18.65■□□□□ 0.58
SRRM1-207ENST00000468822 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.65■□□□□ 0.58
SRRM1-207ENST00000468822 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.65■□□□□ 0.58
SRRM1-207ENST00000468822 TMEM39AQ9NV64 488 aa18.65■□□□□ 0.58
SRRM1-207ENST00000468822 MYADML2A6NDP7 307 aa18.64■□□□□ 0.57
SRRM1-207ENST00000468822 USP17L12C9JPN9 530 aa18.64■□□□□ 0.57
SRRM1-207ENST00000468822 USP17L21D6R901 530 aa18.64■□□□□ 0.57
SRRM1-207ENST00000468822 ADD2P35612 726 aa18.64■□□□□ 0.57
SRRM1-207ENST00000468822 STAT3P40763 770 aa18.64■□□□□ 0.57
SRRM1-207ENST00000468822 CACNB1Q02641 598 aaPredicted RBP18.64■□□□□ 0.57
SRRM1-207ENST00000468822 FPGSQ05932 587 aa18.64■□□□□ 0.57
SRRM1-207ENST00000468822 FAM83BQ5T0W9 1011 aa18.64■□□□□ 0.57
SRRM1-207ENST00000468822 C16orf86Q6ZW13 317 aa18.64■□□□□ 0.57
SRRM1-207ENST00000468822 ANKRD33Q7Z3H0 272 aa18.64■□□□□ 0.57
SRRM1-207ENST00000468822 SH2D4AQ9H788 454 aa18.64■□□□□ 0.57
SRRM1-207ENST00000468822 PPP1R9AQ9ULJ8 1098 aa18.64■□□□□ 0.57
SRRM1-207ENST00000468822 DIS3Q9Y2L1 958 aaKnown RBP18.64■□□□□ 0.57
SRRM1-207ENST00000468822 BDP1A6H8Y1 2624 aa18.64■□□□□ 0.57
SRRM1-207ENST00000468822 TMEM265A0A087WTH1 108 aa18.63■□□□□ 0.57
SRRM1-207ENST00000468822 SNAI1O95863 264 aaPredicted RBP18.63■□□□□ 0.57
SRRM1-207ENST00000468822 DNAJB2P25686 324 aa18.63■□□□□ 0.57
SRRM1-207ENST00000468822 ACLYP53396 1101 aa18.63■□□□□ 0.57
SRRM1-207ENST00000468822 KCTD2Q14681 263 aa18.63■□□□□ 0.57
SRRM1-207ENST00000468822 CCSAPQ6IQ19 270 aaPredicted RBP18.63■□□□□ 0.57
SRRM1-207ENST00000468822 C16orf59Q7L2K0 433 aa18.63■□□□□ 0.57
SRRM1-207ENST00000468822 SIRT2Q8IXJ6 389 aa18.63■□□□□ 0.57
SRRM1-207ENST00000468822 NUP88Q99567 741 aaPredicted RBP18.63■□□□□ 0.57
SRRM1-207ENST00000468822 BCL11AQ9H165 835 aa18.63■□□□□ 0.57
SRRM1-207ENST00000468822 ATP8A2Q9NTI2 1148 aa18.63■□□□□ 0.57
SRRM1-207ENST00000468822 SYNRGQ9UMZ2 1314 aa18.63■□□□□ 0.57
SRRM1-207ENST00000468822 ADCY6O43306 1168 aa18.62■□□□□ 0.57
SRRM1-207ENST00000468822 AKR1A1P14550 325 aa18.62■□□□□ 0.57
SRRM1-207ENST00000468822 KLHDC9Q8NEP7 349 aa18.62■□□□□ 0.57
SRRM1-207ENST00000468822 CCDC17Q96LX7 622 aa18.62■□□□□ 0.57
SRRM1-207ENST00000468822 TBX21Q9UL17 535 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms