RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 YEATS4O95619 227 aa21.84■■□□□ 1.09
SMC4-209ENST00000468653 NR5A1Q13285 461 aa21.84■■□□□ 1.09
SMC4-209ENST00000468653 RRP1BQ14684 758 aaKnown RBP21.84■■□□□ 1.09
SMC4-209ENST00000468653 SF3A1Q15459 793 aaKnown RBP21.84■■□□□ 1.09
SMC4-209ENST00000468653 MIGA2Q7L4E1 593 aa21.84■■□□□ 1.09
SMC4-209ENST00000468653 CDAN1Q8IWY9 1227 aa21.84■■□□□ 1.09
SMC4-209ENST00000468653 LINC00301Q8NCQ3 95 aa21.84■■□□□ 1.09
SMC4-209ENST00000468653 OXER1Q8TDS5 423 aa21.84■■□□□ 1.09
SMC4-209ENST00000468653 PGBD1Q96JS3 809 aa21.84■■□□□ 1.09
SMC4-209ENST00000468653 UBA5Q9GZZ9 404 aa21.84■■□□□ 1.09
SMC4-209ENST00000468653 VAT1LQ9HCJ6 419 aa21.84■■□□□ 1.09
SMC4-209ENST00000468653 VEGFAP15692 232 aaPredicted RBP21.84■■□□□ 1.09
SMC4-209ENST00000468653 ME1P48163 572 aa21.84■■□□□ 1.09
SMC4-209ENST00000468653 NASPP49321 788 aaPredicted RBP21.84■■□□□ 1.09
SMC4-209ENST00000468653 ZNF543Q08ER8 600 aa21.84■■□□□ 1.09
SMC4-209ENST00000468653 CCDC96Q2M329 555 aa21.84■■□□□ 1.09
SMC4-209ENST00000468653 GPATCH4Q5T3I0 446 aaKnown RBP21.84■■□□□ 1.09
SMC4-209ENST00000468653 BICD2Q8TD16 824 aa21.84■■□□□ 1.09
SMC4-209ENST00000468653 GPKOWQ92917 476 aaPredicted RBP eCLIP21.84■■□□□ 1.093e-13■□□□□ 9.7
SMC4-209ENST00000468653 SEC63Q9UGP8 760 aaKnown RBP21.84■■□□□ 1.09
SMC4-209ENST00000468653 PGAP2Q9UHJ9 254 aa21.84■■□□□ 1.09
SMC4-209ENST00000468653 HACL1Q9UJ83 578 aa21.84■■□□□ 1.09
SMC4-209ENST00000468653 SCAF8Q9UPN6 1271 aaKnown RBP21.84■■□□□ 1.09
SMC4-209ENST00000468653 CALML3P27482 149 aa21.83■■□□□ 1.09
SMC4-209ENST00000468653 JAG1P78504 1218 aa21.83■■□□□ 1.09
SMC4-209ENST00000468653 HEATR3Q7Z4Q2 680 aa21.83■■□□□ 1.09
SMC4-209ENST00000468653 KCNG4Q8TDN1 519 aa21.83■■□□□ 1.09
SMC4-209ENST00000468653 GPRC5DQ9NZD1 345 aa21.83■■□□□ 1.09
SMC4-209ENST00000468653 RNF181Q9P0P0 153 aa21.83■■□□□ 1.09
SMC4-209ENST00000468653 ISY1Q9ULR0 285 aaKnown RBP21.83■■□□□ 1.09
SMC4-209ENST00000468653 MYH4Q9Y623 1939 aa21.83■■□□□ 1.08
SMC4-209ENST00000468653 DICER1Q9UPY3 1922 aaKnown RBP21.82■■□□□ 1.08
SMC4-209ENST00000468653 YBX3P16989 372 aaKnown RBP eCLIP21.82■■□□□ 1.08
SMC4-209ENST00000468653 HOMER1Q86YM7 354 aa21.82■■□□□ 1.08
SMC4-209ENST00000468653 SIAH1Q8IUQ4 282 aa21.82■■□□□ 1.08
SMC4-209ENST00000468653 RIOX1Q9H6W3 641 aa21.82■■□□□ 1.08
SMC4-209ENST00000468653 ASTN2O75129 1339 aaPredicted RBP21.82■■□□□ 1.08
SMC4-209ENST00000468653 SPTLC2O15270 562 aa21.82■■□□□ 1.08
SMC4-209ENST00000468653 RILPL1Q5EBL4 403 aa21.82■■□□□ 1.08
SMC4-209ENST00000468653 SLFN13Q68D06 897 aa21.82■■□□□ 1.08
SMC4-209ENST00000468653 WWC2Q6AWC2 1192 aa21.82■■□□□ 1.08
SMC4-209ENST00000468653 CCDC148Q8NFR7 591 aa21.82■■□□□ 1.08
SMC4-209ENST00000468653 DCAF4Q8WV16 495 aa21.82■■□□□ 1.08
SMC4-209ENST00000468653 BARHL2Q9NY43 387 aa21.82■■□□□ 1.08
SMC4-209ENST00000468653 DEKP35659 375 aaKnown RBP21.81■■□□□ 1.08
SMC4-209ENST00000468653 CCDC183Q5T5S1 534 aa21.81■■□□□ 1.08
SMC4-209ENST00000468653 PIGSQ96S52 555 aa21.81■■□□□ 1.08
SMC4-209ENST00000468653 SLC1A4P43007 532 aa21.8■■□□□ 1.08
SMC4-209ENST00000468653 NPY5RQ15761 445 aa21.8■■□□□ 1.08
SMC4-209ENST00000468653 KCTD1Q719H9 257 aa21.8■■□□□ 1.08
SMC4-209ENST00000468653 ARHGEF10LQ9HCE6 1279 aa21.8■■□□□ 1.08
SMC4-209ENST00000468653 ZBTB21Q9ULJ3 1066 aa21.8■■□□□ 1.08
SMC4-209ENST00000468653 SBF1O95248 1867 aa21.8■■□□□ 1.08
SMC4-209ENST00000468653 STXBP3O00186 592 aa21.79■■□□□ 1.08
SMC4-209ENST00000468653 LIG1P18858 919 aa21.79■■□□□ 1.08
SMC4-209ENST00000468653 ZNF445P59923 1031 aa21.79■■□□□ 1.08
SMC4-209ENST00000468653 MAP3K10Q02779 954 aa21.79■■□□□ 1.08
SMC4-209ENST00000468653 SLC39A14Q15043 492 aa21.79■■□□□ 1.08
SMC4-209ENST00000468653 FAM177A1Q8N128 213 aaPredicted RBP21.79■■□□□ 1.08
SMC4-209ENST00000468653 GMCL1P1Q8NEA9 526 aa21.79■■□□□ 1.08
SMC4-209ENST00000468653 TEPSINQ96N21 525 aa21.79■■□□□ 1.08
SMC4-209ENST00000468653 DEFB129Q9H1M3 183 aa21.79■■□□□ 1.08
SMC4-209ENST00000468653 PCDHA7Q9UN72 937 aa21.79■■□□□ 1.08
SMC4-209ENST00000468653 F5H6K3 240 aa21.79■■□□□ 1.08
SMC4-209ENST00000468653 CAP2P40123 477 aa21.79■■□□□ 1.08
SMC4-209ENST00000468653 KLRC3Q07444 240 aa21.79■■□□□ 1.08
SMC4-209ENST00000468653 TTBK2Q6IQ55 1244 aa21.79■■□□□ 1.08
SMC4-209ENST00000468653 BLIDQ8IZY5 108 aa21.79■■□□□ 1.08
SMC4-209ENST00000468653 TRPM4Q8TD43 1214 aa21.79■■□□□ 1.08
SMC4-209ENST00000468653 CCDC12Q8WUD4 166 aaPredicted RBP21.79■■□□□ 1.08
SMC4-209ENST00000468653 GOLGA6L3A6NEY3 463 aa21.78■■□□□ 1.08
SMC4-209ENST00000468653 EPS15P42566 896 aa21.78■■□□□ 1.08
SMC4-209ENST00000468653 TOB1P50616 345 aaPredicted RBP21.78■■□□□ 1.08
SMC4-209ENST00000468653 NAPAP54920 295 aa21.78■■□□□ 1.08
SMC4-209ENST00000468653 GALNT17Q6IS24 598 aa21.78■■□□□ 1.08
SMC4-209ENST00000468653 APOBEC3FQ8IUX4 373 aaKnown RBP21.78■■□□□ 1.08
SMC4-209ENST00000468653 CCAR1Q8IX12 1150 aaKnown RBP21.78■■□□□ 1.08
SMC4-209ENST00000468653 ADGRF4Q8IZF3 695 aa21.78■■□□□ 1.08
SMC4-209ENST00000468653 JMYQ8N9B5 988 aa21.78■■□□□ 1.08
SMC4-209ENST00000468653 SYNPO2Q9UMS6 1093 aa21.78■■□□□ 1.08
SMC4-209ENST00000468653 NOL7Q9UMY1 257 aaKnown RBP21.78■■□□□ 1.08
SMC4-209ENST00000468653 PCDHA4Q9UN74 947 aa21.78■■□□□ 1.08
SMC4-209ENST00000468653 SYCE3A1L190 88 aa21.77■■□□□ 1.08
SMC4-209ENST00000468653 DDNO94850 711 aaPredicted RBP21.77■■□□□ 1.08
SMC4-209ENST00000468653 SLC16A2P36021 539 aa21.77■■□□□ 1.08
SMC4-209ENST00000468653 ANGEL2Q5VTE6 544 aaKnown RBP21.77■■□□□ 1.08
SMC4-209ENST00000468653 TYW1BQ6NUM6 668 aa21.77■■□□□ 1.08
SMC4-209ENST00000468653 TNFRSF25Q93038 417 aa21.77■■□□□ 1.08
SMC4-209ENST00000468653 hCG_1984214I3L0E3 225 aa21.76■■□□□ 1.07
SMC4-209ENST00000468653 NDUFB10O96000 172 aa21.76■■□□□ 1.07
SMC4-209ENST00000468653 ATP2B1P20020 1258 aa21.76■■□□□ 1.07
SMC4-209ENST00000468653 PTPAQ15257 358 aa21.76■■□□□ 1.07
SMC4-209ENST00000468653 C9orf131Q5VYM1 1079 aa21.76■■□□□ 1.07
SMC4-209ENST00000468653 ADALQ6DHV7 355 aa21.76■■□□□ 1.07
SMC4-209ENST00000468653 ZNF713Q8N859 430 aaPredicted RBP21.76■■□□□ 1.07
SMC4-209ENST00000468653 GMCL1Q96IK5 515 aa21.76■■□□□ 1.07
SMC4-209ENST00000468653 JMJD4Q9H9V9 463 aa21.76■■□□□ 1.07
SMC4-209ENST00000468653 A0A1W2PRG0 241 aa21.76■■□□□ 1.07
SMC4-209ENST00000468653 FAM205CA6NFA0 338 aa21.76■■□□□ 1.07
SMC4-209ENST00000468653 LETM1O95202 739 aaPredicted RBP21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms