RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 EAPPQ56P03 285 aaPredicted RBP6.44□□□□□ -1.38
SSB-208ENST00000468600 RNF111Q6ZNA4 994 aa6.44□□□□□ -1.38
SSB-208ENST00000468600 ZDHHC14Q8IZN3 488 aa6.44□□□□□ -1.38
SSB-208ENST00000468600 JARID2Q92833 1246 aaPredicted RBP6.44□□□□□ -1.38
SSB-208ENST00000468600 TEPSINQ96N21 525 aa6.44□□□□□ -1.38
SSB-208ENST00000468600 DUSP9Q99956 384 aaKnown RBP6.44□□□□□ -1.38
SSB-208ENST00000468600 CORINQ9Y5Q5 1042 aa6.44□□□□□ -1.38
SSB-208ENST00000468600 SHISA3A0PJX4 238 aa6.43□□□□□ -1.38
SSB-208ENST00000468600 ABLIM1O14639 778 aa6.43□□□□□ -1.38
SSB-208ENST00000468600 AKAP8O43823 692 aaKnown RBP6.43□□□□□ -1.38
SSB-208ENST00000468600 BPNT1O95861 308 aa6.43□□□□□ -1.38
SSB-208ENST00000468600 TFE3P19532 575 aaPredicted RBP6.43□□□□□ -1.38
SSB-208ENST00000468600 KIR2DL1P43626 348 aaPredicted RBP6.43□□□□□ -1.38
SSB-208ENST00000468600 KIR2DL2P43627 348 aaPredicted RBP6.43□□□□□ -1.38
SSB-208ENST00000468600 ST13P50502 369 aaKnown RBP6.43□□□□□ -1.38
SSB-208ENST00000468600 PUM1Q14671 1186 aaKnown RBP eCLIP6.43□□□□□ -1.38
SSB-208ENST00000468600 CEP128Q6ZU80 1094 aa6.43□□□□□ -1.38
SSB-208ENST00000468600 CCDC84Q86UT8 332 aaPredicted RBP6.43□□□□□ -1.38
SSB-208ENST00000468600 SLFN12Q8IYM2 578 aa6.43□□□□□ -1.38
SSB-208ENST00000468600 KREMEN1Q96MU8 473 aa6.43□□□□□ -1.38
SSB-208ENST00000468600 G6PC3Q9BUM1 346 aa6.43□□□□□ -1.38
SSB-208ENST00000468600 ADAM7Q9H2U9 754 aa6.43□□□□□ -1.38
SSB-208ENST00000468600 ANKRD33BA6NCL7 494 aa6.42□□□□□ -1.38
SSB-208ENST00000468600 NRDCO43847 1150 aa6.42□□□□□ -1.38
SSB-208ENST00000468600 VIPR1P32241 457 aa6.42□□□□□ -1.38
SSB-208ENST00000468600 TMEM201Q5SNT2 666 aa6.42□□□□□ -1.38
SSB-208ENST00000468600 CNKSR3Q6P9H4 555 aa6.42□□□□□ -1.38
SSB-208ENST00000468600 WAPLQ7Z5K2 1190 aa6.42□□□□□ -1.38
SSB-208ENST00000468600 MAP6Q96JE9 813 aa6.42□□□□□ -1.38
SSB-208ENST00000468600 CNTD2Q9H8S5 307 aa6.42□□□□□ -1.38
SSB-208ENST00000468600 SSU72P8A0A1W2PR75 194 aa6.41□□□□□ -1.38
SSB-208ENST00000468600 ZC3H12DA2A288 527 aaKnown RBP6.41□□□□□ -1.38
SSB-208ENST00000468600 IRS4O14654 1257 aaPredicted RBP6.41□□□□□ -1.38
SSB-208ENST00000468600 DAB2P98082 770 aa6.41□□□□□ -1.38
SSB-208ENST00000468600 TAF1CQ15572 869 aaPredicted RBP6.41□□□□□ -1.38
SSB-208ENST00000468600 VMACQ2NL98 169 aa6.41□□□□□ -1.38
SSB-208ENST00000468600 SND1Q7KZF4 910 aaKnown RBP eCLIP6.41□□□□□ -1.38
SSB-208ENST00000468600 SYT8Q8NBV8 401 aa6.41□□□□□ -1.38
SSB-208ENST00000468600 CCDC74BQ96LY2 380 aa6.41□□□□□ -1.38
SSB-208ENST00000468600 LUC7LQ9NQ29 371 aaKnown RBP6.41□□□□□ -1.38
SSB-208ENST00000468600 RNF19AQ9NV58 838 aa6.41□□□□□ -1.38
SSB-208ENST00000468600 KLHL3Q9UH77 587 aa6.41□□□□□ -1.38
SSB-208ENST00000468600 ZNF281Q9Y2X9 895 aa6.41□□□□□ -1.38
SSB-208ENST00000468600 NOTOA8MTQ0 251 aa6.4□□□□□ -1.38
SSB-208ENST00000468600 PNLIPP16233 465 aa6.4□□□□□ -1.38
SSB-208ENST00000468600 TMEM62Q0P6H9 643 aa6.4□□□□□ -1.38
SSB-208ENST00000468600 NMIQ13287 307 aaPredicted RBP6.4□□□□□ -1.38
SSB-208ENST00000468600 MEI1Q5TIA1 1274 aa6.4□□□□□ -1.38
SSB-208ENST00000468600 PHACTR4Q8IZ21 702 aa6.4□□□□□ -1.38
SSB-208ENST00000468600 ENOX1Q8TC92 643 aaKnown RBP6.4□□□□□ -1.38
SSB-208ENST00000468600 SYTL5Q8TDW5 730 aaPredicted RBP6.4□□□□□ -1.38
SSB-208ENST00000468600 MZB1Q8WU39 189 aa6.4□□□□□ -1.38
SSB-208ENST00000468600 CRELD1Q96HD1 420 aa6.4□□□□□ -1.38
SSB-208ENST00000468600 MYRFQ9Y2G1 1151 aa6.4□□□□□ -1.38
SSB-208ENST00000468600 USP31Q70CQ4 1352 aa6.4□□□□□ -1.39
SSB-208ENST00000468600 CDR1P51861 262 aa6.39□□□□□ -1.39
SSB-208ENST00000468600 PCBP3P57721 371 aaKnown RBP6.39□□□□□ -1.39
SSB-208ENST00000468600 YBX1P67809 324 aaKnown RBP6.39□□□□□ -1.39
SSB-208ENST00000468600 PHC3Q8NDX5 983 aa6.39□□□□□ -1.39
SSB-208ENST00000468600 FOXP3Q9BZS1 431 aa6.39□□□□□ -1.39
SSB-208ENST00000468600 EPB41L4AQ9HCS5 686 aaPredicted RBP6.39□□□□□ -1.39
SSB-208ENST00000468600 PARP2Q9UGN5 583 aa6.39□□□□□ -1.39
SSB-208ENST00000468600 OVOL3O00110 214 aa6.38□□□□□ -1.39
SSB-208ENST00000468600 EFEMP2O95967 443 aa6.38□□□□□ -1.39
SSB-208ENST00000468600 MPOP05164 745 aa6.38□□□□□ -1.39
SSB-208ENST00000468600 SDHBP21912 280 aa6.38□□□□□ -1.39
SSB-208ENST00000468600 ARL4AP40617 200 aa6.38□□□□□ -1.39
SSB-208ENST00000468600 PLP2Q04941 152 aa6.38□□□□□ -1.39
SSB-208ENST00000468600 TMC4Q7Z404 712 aa6.38□□□□□ -1.39
SSB-208ENST00000468600 FAM129CQ86XR2 697 aa6.38□□□□□ -1.39
SSB-208ENST00000468600 BDH2Q9BUT1 245 aa6.38□□□□□ -1.39
SSB-208ENST00000468600 HDAC8Q9BY41 377 aa6.38□□□□□ -1.39
SSB-208ENST00000468600 REV1Q9UBZ9 1251 aa6.38□□□□□ -1.39
SSB-208ENST00000468600 TCFL5Q9UL49 500 aa6.38□□□□□ -1.39
SSB-208ENST00000468600 TLR6Q9Y2C9 796 aa6.38□□□□□ -1.39
SSB-208ENST00000468600 PRR36Q9H6K5 1346 aa6.38□□□□□ -1.39
SSB-208ENST00000468600 FAM221AA4D161 298 aa6.37□□□□□ -1.39
SSB-208ENST00000468600 CILPO75339 1184 aa6.37□□□□□ -1.39
SSB-208ENST00000468600 CTSHP09668 335 aa6.37□□□□□ -1.39
SSB-208ENST00000468600 ERVFRD-1P60508 538 aa6.37□□□□□ -1.39
SSB-208ENST00000468600 RNF4P78317 190 aa6.37□□□□□ -1.39
SSB-208ENST00000468600 DNAJC14Q6Y2X3 702 aaPredicted RBP6.37□□□□□ -1.39
SSB-208ENST00000468600 FRMD5Q7Z6J6 570 aa6.37□□□□□ -1.39
SSB-208ENST00000468600 LINC01356Q8N9X3 169 aa6.37□□□□□ -1.39
SSB-208ENST00000468600 DAGLBQ8NCG7 672 aa6.37□□□□□ -1.39
SSB-208ENST00000468600 HHIPL1Q96JK4 782 aa6.37□□□□□ -1.39
SSB-208ENST00000468600 TAF6LQ9Y6J9 622 aa6.37□□□□□ -1.39
SSB-208ENST00000468600 GBP1P32455 592 aa6.36□□□□□ -1.39
SSB-208ENST00000468600 RTP1P59025 263 aa6.36□□□□□ -1.39
SSB-208ENST00000468600 LMNB2Q03252 620 aa6.36□□□□□ -1.39
SSB-208ENST00000468600 PSMD2Q13200 908 aa6.36□□□□□ -1.39
SSB-208ENST00000468600 GALNT18Q6P9A2 607 aa6.36□□□□□ -1.39
SSB-208ENST00000468600 TMC6Q7Z403 805 aa6.36□□□□□ -1.39
SSB-208ENST00000468600 TMEFF1Q8IYR6 380 aa6.36□□□□□ -1.39
SSB-208ENST00000468600 USHBP1Q8N6Y0 703 aa6.36□□□□□ -1.39
SSB-208ENST00000468600 ZNF655Q8N720 491 aaPredicted RBP6.36□□□□□ -1.39
SSB-208ENST00000468600 GATAD2BQ8WXI9 593 aa6.36□□□□□ -1.39
SSB-208ENST00000468600 TCTN2Q96GX1 697 aa6.36□□□□□ -1.39
SSB-208ENST00000468600 PWWP2AQ96N64 755 aa6.36□□□□□ -1.39
SSB-208ENST00000468600 CHURC1-FNTBB4DL54 471 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms