RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 HIP1O00291 1037 aa17.15■□□□□ 0.34
COL27A1-203ENST00000468565 FLOT1O75955 427 aa17.15■□□□□ 0.34
COL27A1-203ENST00000468565 MFAP1P55081 439 aaKnown RBP17.15■□□□□ 0.34
COL27A1-203ENST00000468565 ZNF589Q86UQ0 364 aaPredicted RBP17.15■□□□□ 0.34
COL27A1-203ENST00000468565 NKX2-3Q8TAU0 364 aa17.15■□□□□ 0.34
COL27A1-203ENST00000468565 GJB1P08034 283 aa17.15■□□□□ 0.34
COL27A1-203ENST00000468565 TSPY3P0CV98 308 aa17.15■□□□□ 0.34
COL27A1-203ENST00000468565 TSPY8P0CW00 308 aa17.15■□□□□ 0.34
COL27A1-203ENST00000468565 HSPD1P10809 573 aaKnown RBP17.15■□□□□ 0.34
COL27A1-203ENST00000468565 XRCC5P13010 732 aaKnown RBP17.15■□□□□ 0.34
COL27A1-203ENST00000468565 MORN1Q5T089 497 aa17.15■□□□□ 0.34
COL27A1-203ENST00000468565 USP6NLQ92738 828 aa17.15■□□□□ 0.34
COL27A1-203ENST00000468565 MKL1Q969V6 931 aa17.15■□□□□ 0.34
COL27A1-203ENST00000468565 MTMR4Q9NYA4 1195 aa17.15■□□□□ 0.34
COL27A1-203ENST00000468565 HMGCRP04035 888 aa17.14■□□□□ 0.33
COL27A1-203ENST00000468565 TRMT44Q8IYL2 757 aaKnown RBP17.14■□□□□ 0.33
COL27A1-203ENST00000468565 CEP95Q96GE4 821 aa17.14■□□□□ 0.33
COL27A1-203ENST00000468565 RNF208Q9H0X6 261 aa17.14■□□□□ 0.33
COL27A1-203ENST00000468565 CWC22Q9HCG8 908 aaKnown RBP17.14■□□□□ 0.33
COL27A1-203ENST00000468565 TTLL1O95922 423 aa17.13■□□□□ 0.33
COL27A1-203ENST00000468565 FGAP02671 866 aa17.13■□□□□ 0.33
COL27A1-203ENST00000468565 FGRP09769 529 aa17.13■□□□□ 0.33
COL27A1-203ENST00000468565 RGS2P41220 211 aa17.13■□□□□ 0.33
COL27A1-203ENST00000468565 CTDSPL2Q05D32 466 aa17.13■□□□□ 0.33
COL27A1-203ENST00000468565 PPP4R3BQ5MIZ7 849 aa17.13■□□□□ 0.33
COL27A1-203ENST00000468565 SHCBP1Q8NEM2 672 aa17.13■□□□□ 0.33
COL27A1-203ENST00000468565 UNC93B1Q9H1C4 597 aa17.13■□□□□ 0.33
COL27A1-203ENST00000468565 DIAPH3Q9NSV4 1193 aa17.13■□□□□ 0.33
COL27A1-203ENST00000468565 ADAMTS5Q9UNA0 930 aa17.13■□□□□ 0.33
COL27A1-203ENST00000468565 MKI67P46013 3256 aaKnown RBP17.13■□□□□ 0.33
COL27A1-203ENST00000468565 F5H6K3 240 aa17.13■□□□□ 0.33
COL27A1-203ENST00000468565 CAPN2P17655 700 aa17.13■□□□□ 0.33
COL27A1-203ENST00000468565 CYP2B6P20813 491 aa17.13■□□□□ 0.33
COL27A1-203ENST00000468565 GJA8P48165 433 aa17.13■□□□□ 0.33
COL27A1-203ENST00000468565 TFAP4Q01664 338 aa17.13■□□□□ 0.33
COL27A1-203ENST00000468565 KLRC3Q07444 240 aa17.13■□□□□ 0.33
COL27A1-203ENST00000468565 ATG4CQ96DT6 458 aa17.13■□□□□ 0.33
COL27A1-203ENST00000468565 SPATC1LQ9H0A9 340 aa17.13■□□□□ 0.33
COL27A1-203ENST00000468565 CLIP2Q9UDT6 1046 aa17.13■□□□□ 0.33
COL27A1-203ENST00000468565 SLC15A5A6NIM6 579 aa17.12■□□□□ 0.33
COL27A1-203ENST00000468565 ORC4O43929 436 aa17.12■□□□□ 0.33
COL27A1-203ENST00000468565 PTPREP23469 700 aa17.12■□□□□ 0.33
COL27A1-203ENST00000468565 FAM47AQ5JRC9 791 aa17.12■□□□□ 0.33
COL27A1-203ENST00000468565 FAM83BQ5T0W9 1011 aa17.12■□□□□ 0.33
COL27A1-203ENST00000468565 TTC22Q5TAA0 569 aa17.12■□□□□ 0.33
COL27A1-203ENST00000468565 TRIB2Q92519 343 aa17.12■□□□□ 0.33
COL27A1-203ENST00000468565 SHISA4Q96DD7 197 aa17.12■□□□□ 0.33
COL27A1-203ENST00000468565 APBA2Q99767 749 aa17.12■□□□□ 0.33
COL27A1-203ENST00000468565 MOV10L1Q9BXT6 1211 aaKnown RBP17.12■□□□□ 0.33
COL27A1-203ENST00000468565 DAXXQ9UER7 740 aaPredicted RBP17.12■□□□□ 0.33
COL27A1-203ENST00000468565 PPP1R9AQ9ULJ8 1098 aa17.12■□□□□ 0.33
COL27A1-203ENST00000468565 IVNS1ABPQ9Y6Y0 642 aa17.12■□□□□ 0.33
COL27A1-203ENST00000468565 RAD21O60216 631 aa17.11■□□□□ 0.33
COL27A1-203ENST00000468565 NDUFB10O96000 172 aa17.11■□□□□ 0.33
COL27A1-203ENST00000468565 MAP2K5Q13163 448 aa17.11■□□□□ 0.33
COL27A1-203ENST00000468565 CWC27Q6UX04 472 aaKnown RBP17.11■□□□□ 0.33
COL27A1-203ENST00000468565 GMCL1P1Q8NEA9 526 aa17.11■□□□□ 0.33
COL27A1-203ENST00000468565 PAK6Q9NQU5 681 aaPredicted RBP17.11■□□□□ 0.33
COL27A1-203ENST00000468565 TSPY2A6NKD2 308 aa17.11■□□□□ 0.33
COL27A1-203ENST00000468565 GRB14Q14449 540 aa17.11■□□□□ 0.33
COL27A1-203ENST00000468565 WDR78Q5VTH9 848 aa17.11■□□□□ 0.33
COL27A1-203ENST00000468565 FBXO28Q9NVF7 368 aa17.11■□□□□ 0.33
COL27A1-203ENST00000468565 TACC3Q9Y6A5 838 aa17.11■□□□□ 0.33
COL27A1-203ENST00000468565 PLXNA1Q9UIW2 1896 aa17.11■□□□□ 0.33
COL27A1-203ENST00000468565 STRNO43815 780 aa17.1■□□□□ 0.33
COL27A1-203ENST00000468565 PCP11498 1178 aaKnown RBP17.1■□□□□ 0.33
COL27A1-203ENST00000468565 GSPT1P15170 499 aaKnown RBP17.1■□□□□ 0.33
COL27A1-203ENST00000468565 ZKSCAN1P17029 563 aaPredicted RBP17.1■□□□□ 0.33
COL27A1-203ENST00000468565 U2AF1L4Q8WU68 220 aaKnown RBP17.1■□□□□ 0.33
COL27A1-203ENST00000468565 MROH8Q9H579 483 aa17.1■□□□□ 0.33
COL27A1-203ENST00000468565 SGPL1O95470 568 aa17.09■□□□□ 0.33
COL27A1-203ENST00000468565 HOXC6P09630 235 aa17.09■□□□□ 0.33
COL27A1-203ENST00000468565 ERCC3P19447 782 aa17.09■□□□□ 0.33
COL27A1-203ENST00000468565 MAP3K21Q5TCX8 1036 aa17.09■□□□□ 0.33
COL27A1-203ENST00000468565 SLF1Q9BQI6 1058 aa17.09■□□□□ 0.33
COL27A1-203ENST00000468565 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.09■□□□□ 0.33
COL27A1-203ENST00000468565 INCENPQ9NQS7 918 aa17.09■□□□□ 0.33
COL27A1-203ENST00000468565 RPTORQ8N122 1335 aa17.09■□□□□ 0.33
COL27A1-203ENST00000468565 FRMPD3Q5JV73 1810 aa17.09■□□□□ 0.33
COL27A1-203ENST00000468565 VWA5AO00534 786 aa17.09■□□□□ 0.33
COL27A1-203ENST00000468565 RANBP6O60518 1105 aaKnown RBP17.09■□□□□ 0.33
COL27A1-203ENST00000468565 SLC25A27O95847 323 aa17.09■□□□□ 0.33
COL27A1-203ENST00000468565 PLS1Q14651 629 aa17.09■□□□□ 0.33
COL27A1-203ENST00000468565 TMEM132BQ14DG7 1078 aa17.09■□□□□ 0.33
COL27A1-203ENST00000468565 LRRC47Q8N1G4 583 aaKnown RBP17.09■□□□□ 0.33
COL27A1-203ENST00000468565 NUP88Q99567 741 aaPredicted RBP17.09■□□□□ 0.33
COL27A1-203ENST00000468565 HMX1Q9NP08 348 aaPredicted RBP17.09■□□□□ 0.33
COL27A1-203ENST00000468565 NOVP48745 357 aa17.08■□□□□ 0.33
COL27A1-203ENST00000468565 RIOX2Q8IUF8 465 aa17.08■□□□□ 0.33
COL27A1-203ENST00000468565 ABRAQ8N0Z2 381 aa17.08■□□□□ 0.33
COL27A1-203ENST00000468565 REPS2Q8NFH8 660 aa17.08■□□□□ 0.33
COL27A1-203ENST00000468565 DEFB118Q96PH6 123 aa17.08■□□□□ 0.33
COL27A1-203ENST00000468565 IL17RBQ9NRM6 502 aa17.08■□□□□ 0.33
COL27A1-203ENST00000468565 COPB2P35606 906 aa17.08■□□□□ 0.32
COL27A1-203ENST00000468565 TRIM32Q13049 653 aa17.08■□□□□ 0.32
COL27A1-203ENST00000468565 SLFN13Q68D06 897 aa17.08■□□□□ 0.32
COL27A1-203ENST00000468565 NCAPG2Q86XI2 1143 aa17.08■□□□□ 0.32
COL27A1-203ENST00000468565 PRPF38AQ8NAV1 312 aaKnown RBP17.08■□□□□ 0.32
COL27A1-203ENST00000468565 STAG1Q8WVM7 1258 aa17.08■□□□□ 0.32
COL27A1-203ENST00000468565 DSCC1Q9BVC3 393 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms