RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 PRAMEF22A3QJZ6 481 aa5.19□□□□□ -1.58
TMEM39A-204ENST00000468545 UNCXA6NJT0 531 aa5.19□□□□□ -1.58
TMEM39A-204ENST00000468545 KCNQ2O43526 872 aa5.19□□□□□ -1.58
TMEM39A-204ENST00000468545 DEAF1O75398 565 aaPredicted RBP5.19□□□□□ -1.58
TMEM39A-204ENST00000468545 CTSHP09668 335 aa5.19□□□□□ -1.58
TMEM39A-204ENST00000468545 SPATA31C1P0DKV0 1188 aa5.19□□□□□ -1.58
TMEM39A-204ENST00000468545 ELNP15502 786 aa5.19□□□□□ -1.58
TMEM39A-204ENST00000468545 ARL4DP49703 201 aa5.19□□□□□ -1.58
TMEM39A-204ENST00000468545 RARSP54136 660 aaKnown RBP5.19□□□□□ -1.58
TMEM39A-204ENST00000468545 EIF4A1P60842 406 aaKnown RBP5.19□□□□□ -1.58
TMEM39A-204ENST00000468545 C19orf57Q0VDD7 668 aa5.19□□□□□ -1.58
TMEM39A-204ENST00000468545 TRIM28Q13263 835 aaKnown RBP5.19□□□□□ -1.58
TMEM39A-204ENST00000468545 ZNF790Q6PG37 636 aa5.19□□□□□ -1.58
TMEM39A-204ENST00000468545 KRT27Q7Z3Y8 459 aa5.19□□□□□ -1.58
TMEM39A-204ENST00000468545 FBXO11Q86XK2 927 aa5.19□□□□□ -1.58
TMEM39A-204ENST00000468545 KLHL23Q8NBE8 558 aa5.19□□□□□ -1.58
TMEM39A-204ENST00000468545 SSH1Q8WYL5 1049 aa5.19□□□□□ -1.58
TMEM39A-204ENST00000468545 MRRFQ96E11 262 aaKnown RBP5.19□□□□□ -1.58
TMEM39A-204ENST00000468545 KRTAP4-6Q9BYQ5 205 aa5.19□□□□□ -1.58
TMEM39A-204ENST00000468545 SEC31BQ9NQW1 1179 aa5.19□□□□□ -1.58
TMEM39A-204ENST00000468545 SMC4Q9NTJ3 1288 aa5.19□□□□□ -1.58
TMEM39A-204ENST00000468545 ASAP1Q9ULH1 1129 aa5.19□□□□□ -1.58
TMEM39A-204ENST00000468545 DISP2A7MBM2 1401 aa5.19□□□□□ -1.58
TMEM39A-204ENST00000468545 KDM6AO15550 1401 aaPredicted RBP5.19□□□□□ -1.58
TMEM39A-204ENST00000468545 NWD2Q9ULI1 1742 aa5.19□□□□□ -1.58
TMEM39A-204ENST00000468545 CEMIPQ8WUJ3 1361 aa5.18□□□□□ -1.58
TMEM39A-204ENST00000468545 KRBA1A5PL33 1030 aa5.18□□□□□ -1.58
TMEM39A-204ENST00000468545 SOX1O00570 391 aaPredicted RBP5.18□□□□□ -1.58
TMEM39A-204ENST00000468545 ANXA1P04083 346 aa5.18□□□□□ -1.58
TMEM39A-204ENST00000468545 COL8A1P27658 744 aa5.18□□□□□ -1.58
TMEM39A-204ENST00000468545 ST13P50502 369 aaKnown RBP5.18□□□□□ -1.58
TMEM39A-204ENST00000468545 FAAP100Q0VG06 881 aa5.18□□□□□ -1.58
TMEM39A-204ENST00000468545 ZNF423Q2M1K9 1284 aa5.18□□□□□ -1.58
TMEM39A-204ENST00000468545 PTF1AQ7RTS3 328 aa5.18□□□□□ -1.58
TMEM39A-204ENST00000468545 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.18□□□□□ -1.58
TMEM39A-204ENST00000468545 SLC7A3Q8WY07 619 aa5.18□□□□□ -1.58
TMEM39A-204ENST00000468545 ZNF428Q96B54 188 aa5.18□□□□□ -1.58
TMEM39A-204ENST00000468545 ZNF496Q96IT1 587 aaPredicted RBP5.18□□□□□ -1.58
TMEM39A-204ENST00000468545 FMNL2Q96PY5 1086 aa5.18□□□□□ -1.58
TMEM39A-204ENST00000468545 SPOCK3Q9BQ16 436 aa5.18□□□□□ -1.58
TMEM39A-204ENST00000468545 CEP44Q9C0F1 390 aa5.18□□□□□ -1.58
TMEM39A-204ENST00000468545 ATG3Q9NT62 314 aa5.18□□□□□ -1.58
TMEM39A-204ENST00000468545 BABAM1Q9NWV8 329 aa5.18□□□□□ -1.58
TMEM39A-204ENST00000468545 GPN3Q9UHW5 284 aaPredicted RBP5.18□□□□□ -1.58
TMEM39A-204ENST00000468545 NOB1Q9ULX3 412 aaKnown RBP5.18□□□□□ -1.58
TMEM39A-204ENST00000468545 TTF2Q9UNY4 1162 aaKnown RBP5.18□□□□□ -1.58
TMEM39A-204ENST00000468545 KAT6BQ8WYB5 2073 aa5.18□□□□□ -1.58
TMEM39A-204ENST00000468545 PARP4Q9UKK3 1724 aaKnown RBP5.17□□□□□ -1.58
TMEM39A-204ENST00000468545 GLI3P10071 1580 aa5.17□□□□□ -1.58
TMEM39A-204ENST00000468545 TNS2Q63HR2 1409 aa5.17□□□□□ -1.58
TMEM39A-204ENST00000468545 FAM229AH3BQW9 127 aa5.17□□□□□ -1.58
TMEM39A-204ENST00000468545 DLL1O00548 723 aa5.17□□□□□ -1.58
TMEM39A-204ENST00000468545 TM4SF5O14894 197 aa5.17□□□□□ -1.58
TMEM39A-204ENST00000468545 TRIM37O94972 964 aa5.17□□□□□ -1.58
TMEM39A-204ENST00000468545 RECKO95980 971 aa5.17□□□□□ -1.58
TMEM39A-204ENST00000468545 SNRPA1P09661 255 aaKnown RBP5.17□□□□□ -1.58
TMEM39A-204ENST00000468545 MYL6BP14649 208 aa5.17□□□□□ -1.58
TMEM39A-204ENST00000468545 PIP4K2AP48426 406 aaPredicted RBP5.17□□□□□ -1.58
TMEM39A-204ENST00000468545 RBM25P49756 843 aaKnown RBP5.17□□□□□ -1.58
TMEM39A-204ENST00000468545 RRP1P56182 461 aaKnown RBP5.17□□□□□ -1.58
TMEM39A-204ENST00000468545 PPP2R3AQ06190 1150 aa5.17□□□□□ -1.58
TMEM39A-204ENST00000468545 AIMP1Q12904 312 aaKnown RBP5.17□□□□□ -1.58
TMEM39A-204ENST00000468545 TAF1CQ15572 869 aaPredicted RBP5.17□□□□□ -1.58
TMEM39A-204ENST00000468545 MEI1Q5TIA1 1274 aa5.17□□□□□ -1.58
TMEM39A-204ENST00000468545 CCDC30Q5VVM6 783 aa5.17□□□□□ -1.58
TMEM39A-204ENST00000468545 TPTE2Q6XPS3 522 aa5.17□□□□□ -1.58
TMEM39A-204ENST00000468545 GALNT11Q8NCW6 608 aa5.17□□□□□ -1.58
TMEM39A-204ENST00000468545 STK31Q9BXU1 1019 aa5.17□□□□□ -1.58
TMEM39A-204ENST00000468545 TMEM39AQ9NV64 488 aa5.17□□□□□ -1.58
TMEM39A-204ENST00000468545 KIAA1522Q9P206 1035 aaPredicted RBP5.17□□□□□ -1.58
TMEM39A-204ENST00000468545 TNNQ9UQP3 1299 aa5.17□□□□□ -1.58
TMEM39A-204ENST00000468545 USP16Q9Y5T5 823 aa5.17□□□□□ -1.58
TMEM39A-204ENST00000468545 IPO8O15397 1037 aaKnown RBP5.16□□□□□ -1.58
TMEM39A-204ENST00000468545 FBXO24O75426 580 aa5.16□□□□□ -1.58
TMEM39A-204ENST00000468545 A1BGP04217 495 aa5.16□□□□□ -1.58
TMEM39A-204ENST00000468545 CT47B1P0C2W7 299 aaPredicted RBP5.16□□□□□ -1.58
TMEM39A-204ENST00000468545 CD68P34810 354 aaPredicted RBP5.16□□□□□ -1.58
TMEM39A-204ENST00000468545 GSTM4Q03013 218 aa5.16□□□□□ -1.58
TMEM39A-204ENST00000468545 AP3B2Q13367 1082 aa5.16□□□□□ -1.58
TMEM39A-204ENST00000468545 ALDH1L2Q3SY69 923 aa5.16□□□□□ -1.58
TMEM39A-204ENST00000468545 FOXD4L6Q3SYB3 417 aaPredicted RBP5.16□□□□□ -1.58
TMEM39A-204ENST00000468545 C20orf194Q5TEA3 1177 aa5.16□□□□□ -1.58
TMEM39A-204ENST00000468545 ZKSCAN2Q63HK3 967 aa5.16□□□□□ -1.58
TMEM39A-204ENST00000468545 HGSNATQ68CP4 663 aa5.16□□□□□ -1.58
TMEM39A-204ENST00000468545 FOXD4L3Q6VB84 417 aaPredicted RBP5.16□□□□□ -1.58
TMEM39A-204ENST00000468545 FAM196AQ6ZSG2 479 aa5.16□□□□□ -1.58
TMEM39A-204ENST00000468545 SV2BQ7L1I2 683 aa5.16□□□□□ -1.58
TMEM39A-204ENST00000468545 G2E3Q7L622 706 aa5.16□□□□□ -1.58
TMEM39A-204ENST00000468545 DNAJC10Q8IXB1 793 aa5.16□□□□□ -1.58
TMEM39A-204ENST00000468545 PANK1Q8TE04 598 aa5.16□□□□□ -1.58
TMEM39A-204ENST00000468545 KLHDC7BQ96G42 594 aa5.16□□□□□ -1.58
TMEM39A-204ENST00000468545 NECAB3Q96P71 396 aaPredicted RBP5.16□□□□□ -1.58
TMEM39A-204ENST00000468545 NACC1Q96RE7 527 aa5.16□□□□□ -1.58
TMEM39A-204ENST00000468545 NRSN2Q9GZP1 204 aa5.16□□□□□ -1.58
TMEM39A-204ENST00000468545 CHPF2Q9P2E5 772 aa5.16□□□□□ -1.58
TMEM39A-204ENST00000468545 PKD1L3Q7Z443 1732 aa5.16□□□□□ -1.58
TMEM39A-204ENST00000468545 PLEKHG2Q9H7P9 1386 aa5.16□□□□□ -1.58
TMEM39A-204ENST00000468545 ENC1O14682 589 aa5.15□□□□□ -1.59
TMEM39A-204ENST00000468545 ADAM11O75078 769 aa5.15□□□□□ -1.59
TMEM39A-204ENST00000468545 APBA3O96018 575 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms