RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 FCER1AP12319 257 aa15.79■□□□□ 0.12
PTPN7-207ENST00000468385 ADD2P35612 726 aa15.79■□□□□ 0.12
PTPN7-207ENST00000468385 HNRNPUQ00839 825 aaKnown RBP eCLIP15.79■□□□□ 0.12
PTPN7-207ENST00000468385 FERMT2Q96AC1 680 aa15.79■□□□□ 0.12
PTPN7-207ENST00000468385 TRIM43Q96BQ3 446 aaPredicted RBP15.79■□□□□ 0.12
PTPN7-207ENST00000468385 SH2D4AQ9H788 454 aa15.79■□□□□ 0.12
PTPN7-207ENST00000468385 ATP8A2Q9NTI2 1148 aa15.79■□□□□ 0.12
PTPN7-207ENST00000468385 ADAMTS5Q9UNA0 930 aa15.79■□□□□ 0.12
PTPN7-207ENST00000468385 PARP14Q460N5 1801 aa15.79■□□□□ 0.12
PTPN7-207ENST00000468385 SLC25A27O95847 323 aa15.78■□□□□ 0.12
PTPN7-207ENST00000468385 HOXD11P31277 338 aaPredicted RBP15.78■□□□□ 0.12
PTPN7-207ENST00000468385 CDK8P49336 464 aa15.78■□□□□ 0.12
PTPN7-207ENST00000468385 C12orf60Q5U649 245 aa15.78■□□□□ 0.12
PTPN7-207ENST00000468385 SAMD1Q6SPF0 538 aaPredicted RBP15.78■□□□□ 0.12
PTPN7-207ENST00000468385 CCDC17Q96LX7 622 aa15.78■□□□□ 0.12
PTPN7-207ENST00000468385 CDX2Q99626 313 aaPredicted RBP15.78■□□□□ 0.12
PTPN7-207ENST00000468385 SEMA6BQ9H3T3 888 aa15.78■□□□□ 0.12
PTPN7-207ENST00000468385 FBXO28Q9NVF7 368 aa15.78■□□□□ 0.12
PTPN7-207ENST00000468385 PAG1Q9NWQ8 432 aa15.78■□□□□ 0.12
PTPN7-207ENST00000468385 NRBP1Q9UHY1 535 aa15.78■□□□□ 0.12
PTPN7-207ENST00000468385 PHF24Q9UPV7 400 aa15.78■□□□□ 0.12
PTPN7-207ENST00000468385 CUL9Q8IWT3 2517 aa15.77■□□□□ 0.12
PTPN7-207ENST00000468385 SPTBN5Q9NRC6 3674 aaKnown RBP15.77■□□□□ 0.12
PTPN7-207ENST00000468385 MYH8P13535 1937 aa15.77■□□□□ 0.12
PTPN7-207ENST00000468385 CHGBP05060 677 aa15.77■□□□□ 0.12
PTPN7-207ENST00000468385 PGK2P07205 417 aa15.77■□□□□ 0.12
PTPN7-207ENST00000468385 EEF2P13639 858 aaKnown RBP15.77■□□□□ 0.12
PTPN7-207ENST00000468385 ITGB8P26012 769 aa15.77■□□□□ 0.12
PTPN7-207ENST00000468385 ZNF792Q3KQV3 632 aa15.77■□□□□ 0.12
PTPN7-207ENST00000468385 C16orf86Q6ZW13 317 aa15.77■□□□□ 0.12
PTPN7-207ENST00000468385 RIOX2Q8IUF8 465 aa15.77■□□□□ 0.12
PTPN7-207ENST00000468385 SIRT2Q8IXJ6 389 aa15.77■□□□□ 0.12
PTPN7-207ENST00000468385 MMP19Q99542 508 aa15.77■□□□□ 0.12
PTPN7-207ENST00000468385 BOLA2Q9H3K6 86 aa15.77■□□□□ 0.12
PTPN7-207ENST00000468385 XPNPEP3Q9NQH7 507 aa15.77■□□□□ 0.12
PTPN7-207ENST00000468385 BAZ2AQ9UIF9 1905 aaKnown RBP15.76■□□□□ 0.11
PTPN7-207ENST00000468385 COL11A1P12107 1806 aaPredicted RBP15.76■□□□□ 0.11
PTPN7-207ENST00000468385 USP17L12C9JPN9 530 aa15.76■□□□□ 0.11
PTPN7-207ENST00000468385 USP17L21D6R901 530 aa15.76■□□□□ 0.11
PTPN7-207ENST00000468385 RARBP10826 455 aa15.76■□□□□ 0.11
PTPN7-207ENST00000468385 TAL1P17542 331 aaPredicted RBP15.76■□□□□ 0.11
PTPN7-207ENST00000468385 SMAD3P84022 425 aaKnown RBP15.76■□□□□ 0.11
PTPN7-207ENST00000468385 TLE2Q04725 743 aa15.76■□□□□ 0.11
PTPN7-207ENST00000468385 RPAP2Q8IXW5 612 aaPredicted RBP15.76■□□□□ 0.11
PTPN7-207ENST00000468385 REPS2Q8NFH8 660 aa15.76■□□□□ 0.11
PTPN7-207ENST00000468385 TINF2Q9BSI4 451 aa15.76■□□□□ 0.11
PTPN7-207ENST00000468385 TTYH1Q9H313 450 aaPredicted RBP15.76■□□□□ 0.11
PTPN7-207ENST00000468385 PPP1R9AQ9ULJ8 1098 aa15.76■□□□□ 0.11
PTPN7-207ENST00000468385 DIS3Q9Y2L1 958 aaKnown RBP15.76■□□□□ 0.11
PTPN7-207ENST00000468385 ZNFX1Q9P2E3 1918 aaKnown RBP15.76■□□□□ 0.11
PTPN7-207ENST00000468385 ROBO3Q96MS0 1386 aa15.75■□□□□ 0.11
PTPN7-207ENST00000468385 ZBED9Q6R2W3 1325 aa15.75■□□□□ 0.11
PTPN7-207ENST00000468385 VWA5AO00534 786 aa15.75■□□□□ 0.11
PTPN7-207ENST00000468385 PGK1P00558 417 aa15.75■□□□□ 0.11
PTPN7-207ENST00000468385 ZNF865P0CJ78 1059 aaPredicted RBP15.75■□□□□ 0.11
PTPN7-207ENST00000468385 ATP5JP18859 108 aa15.75■□□□□ 0.11
PTPN7-207ENST00000468385 HAUS7Q99871 368 aa15.75■□□□□ 0.11
PTPN7-207ENST00000468385 BCL11AQ9H165 835 aa15.75■□□□□ 0.11
PTPN7-207ENST00000468385 KANSL2Q9H9L4 492 aa15.75■□□□□ 0.11
PTPN7-207ENST00000468385 ZNF214Q9UL59 606 aaPredicted RBP15.75■□□□□ 0.11
PTPN7-207ENST00000468385 TACC3Q9Y6A5 838 aa15.75■□□□□ 0.11
PTPN7-207ENST00000468385 SMCHD1A6NHR9 2005 aa15.74■□□□□ 0.11
PTPN7-207ENST00000468385 RAB11FIP3O75154 756 aa15.74■□□□□ 0.11
PTPN7-207ENST00000468385 HMMRO75330 724 aa15.74■□□□□ 0.11
PTPN7-207ENST00000468385 CLTBP09497 229 aa15.74■□□□□ 0.11
PTPN7-207ENST00000468385 STAT3P40763 770 aa15.74■□□□□ 0.11
PTPN7-207ENST00000468385 EPHB4P54760 987 aa15.74■□□□□ 0.11
PTPN7-207ENST00000468385 KCTD2Q14681 263 aa15.74■□□□□ 0.11
PTPN7-207ENST00000468385 UBE3CQ15386 1083 aa15.74■□□□□ 0.11
PTPN7-207ENST00000468385 CTR9Q6PD62 1173 aa15.74■□□□□ 0.11
PTPN7-207ENST00000468385 RNF180Q86T96 592 aa15.74■□□□□ 0.11
PTPN7-207ENST00000468385 AMOTL1Q8IY63 956 aa15.74■□□□□ 0.11
PTPN7-207ENST00000468385 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.74■□□□□ 0.11
PTPN7-207ENST00000468385 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.74■□□□□ 0.116e-7■■■■□ 19.6
PTPN7-207ENST00000468385 SLC4A4Q9Y6R1 1079 aa15.74■□□□□ 0.11
PTPN7-207ENST00000468385 A0A1W2PQ45 241 aaPredicted RBP15.73■□□□□ 0.11
PTPN7-207ENST00000468385 A0A1W2PQY0 241 aa15.73■□□□□ 0.11
PTPN7-207ENST00000468385 KIAA0355O15063 1070 aa15.73■□□□□ 0.11
PTPN7-207ENST00000468385 ADAMTS4O75173 837 aa15.73■□□□□ 0.11
PTPN7-207ENST00000468385 AKR1A1P14550 325 aa15.73■□□□□ 0.11
PTPN7-207ENST00000468385 FAM83BQ5T0W9 1011 aa15.73■□□□□ 0.11
PTPN7-207ENST00000468385 MAFAQ8NHW3 353 aaPredicted RBP15.73■□□□□ 0.11
PTPN7-207ENST00000468385 MYLIPQ8WY64 445 aa15.73■□□□□ 0.11
PTPN7-207ENST00000468385 LENG1Q96BZ8 264 aaPredicted RBP15.73■□□□□ 0.11
PTPN7-207ENST00000468385 PUS7LQ9H0K6 701 aaKnown RBP15.73■□□□□ 0.11
PTPN7-207ENST00000468385 GOPCQ9HD26 462 aa15.73■□□□□ 0.11
PTPN7-207ENST00000468385 ZBTB40Q9NUA8 1239 aa15.73■□□□□ 0.11
PTPN7-207ENST00000468385 PLXNA1Q9UIW2 1896 aa15.72■□□□□ 0.11
PTPN7-207ENST00000468385 PQBP1O60828 265 aaKnown RBP15.72■□□□□ 0.11
PTPN7-207ENST00000468385 COPB2P35606 906 aa15.72■□□□□ 0.11
PTPN7-207ENST00000468385 GREB1LQ9C091 1923 aaPredicted RBP15.71■□□□□ 0.11
PTPN7-207ENST00000468385 PRUNE2Q8WUY3 3088 aa15.71■□□□□ 0.11
PTPN7-207ENST00000468385 RAD21O60216 631 aa15.71■□□□□ 0.11
PTPN7-207ENST00000468385 MS4A1P11836 297 aa15.71■□□□□ 0.11
PTPN7-207ENST00000468385 RAG1P15918 1043 aa15.71■□□□□ 0.11
PTPN7-207ENST00000468385 DDRGK1Q96HY6 314 aa15.71■□□□□ 0.11
PTPN7-207ENST00000468385 RNPC3Q96LT9 517 aaKnown RBP15.71■□□□□ 0.11
PTPN7-207ENST00000468385 RTN4Q9NQC3 1192 aaKnown RBP15.71■□□□□ 0.11
PTPN7-207ENST00000468385 DDX19BQ9UMR2 479 aa15.71■□□□□ 0.11
PTPN7-207ENST00000468385 CNPY2Q9Y2B0 182 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms