RNA–Protein interactions for RNA: ENST00000468284.1

CKAP2-205, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 3

Gene CKAP2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-205ENST00000468284 MAP3K6O95382 1288 aa11.88□□□□□ -0.51
CKAP2-205ENST00000468284 CPB1P15086 417 aa11.88□□□□□ -0.51
CKAP2-205ENST00000468284 WEE1P30291 646 aa11.88□□□□□ -0.51
CKAP2-205ENST00000468284 ARSDP51689 593 aa11.88□□□□□ -0.51
CKAP2-205ENST00000468284 CAP1Q01518 475 aa11.88□□□□□ -0.51
CKAP2-205ENST00000468284 NRG1Q02297 640 aaPredicted RBP11.88□□□□□ -0.51
CKAP2-205ENST00000468284 OTOP1Q7RTM1 612 aa11.88□□□□□ -0.51
CKAP2-205ENST00000468284 KRT25Q7Z3Z0 450 aa11.88□□□□□ -0.51
CKAP2-205ENST00000468284 FMR1NBQ8N0W7 255 aaPredicted RBP11.88□□□□□ -0.51
CKAP2-205ENST00000468284 ZNF428Q96B54 188 aa11.88□□□□□ -0.51
CKAP2-205ENST00000468284 RRP7AQ9Y3A4 280 aaKnown RBP11.88□□□□□ -0.51
CKAP2-205ENST00000468284 COL4A1P02462 1669 aa11.87□□□□□ -0.51
CKAP2-205ENST00000468284 RBBP6Q7Z6E9 1792 aaKnown RBP11.87□□□□□ -0.51
CKAP2-205ENST00000468284 MYL6BP14649 208 aa11.87□□□□□ -0.51
CKAP2-205ENST00000468284 NOM1Q5C9Z4 860 aaKnown RBP11.87□□□□□ -0.51
CKAP2-205ENST00000468284 TXNRD3Q86VQ6 643 aa11.87□□□□□ -0.51
CKAP2-205ENST00000468284 ZFATQ9P243 1243 aa11.87□□□□□ -0.51
CKAP2-205ENST00000468284 IBTKQ9P2D0 1353 aaPredicted RBP11.87□□□□□ -0.51
CKAP2-205ENST00000468284 SCO2A0A1W2PP80 73 aa11.86□□□□□ -0.51
CKAP2-205ENST00000468284 BBOX1O75936 387 aa11.86□□□□□ -0.51
CKAP2-205ENST00000468284 HCLS1P14317 486 aaPredicted RBP11.86□□□□□ -0.51
CKAP2-205ENST00000468284 FOXD4L6Q3SYB3 417 aaPredicted RBP11.86□□□□□ -0.51
CKAP2-205ENST00000468284 SLC10A5Q5PT55 438 aa11.86□□□□□ -0.51
CKAP2-205ENST00000468284 INTS3Q68E01 1043 aaKnown RBP11.86□□□□□ -0.51
CKAP2-205ENST00000468284 FOXD4L3Q6VB84 417 aaPredicted RBP11.86□□□□□ -0.51
CKAP2-205ENST00000468284 DHX32Q7L7V1 743 aaKnown RBP11.86□□□□□ -0.51
CKAP2-205ENST00000468284 COL3A1P02461 1466 aaPredicted RBP11.86□□□□□ -0.51
CKAP2-205ENST00000468284 ECE2O60344 883 aa11.85□□□□□ -0.51
CKAP2-205ENST00000468284 MICAL2O94851 1124 aa11.85□□□□□ -0.51
CKAP2-205ENST00000468284 PRSS36Q5K4E3 855 aa11.85□□□□□ -0.51
CKAP2-205ENST00000468284 MYO19Q96H55 970 aa11.85□□□□□ -0.51
CKAP2-205ENST00000468284 LPIN3Q9BQK8 851 aa11.85□□□□□ -0.51
CKAP2-205ENST00000468284 FRRS1LQ9P0K9 344 aa11.85□□□□□ -0.51
CKAP2-205ENST00000468284 POLLQ9UGP5 575 aa11.85□□□□□ -0.51
CKAP2-205ENST00000468284 KNSTRNQ9Y448 316 aa11.85□□□□□ -0.51
CKAP2-205ENST00000468284 COL6A3P12111 3177 aa11.85□□□□□ -0.51
CKAP2-205ENST00000468284 LAMB4A4D0S4 1761 aa11.84□□□□□ -0.51
CKAP2-205ENST00000468284 RARAP10276 462 aa11.84□□□□□ -0.51
CKAP2-205ENST00000468284 RPS12P25398 132 aaKnown RBP11.84□□□□□ -0.51
CKAP2-205ENST00000468284 TARSP26639 723 aaKnown RBP11.84□□□□□ -0.51
CKAP2-205ENST00000468284 C11orf91Q3C1V1 193 aa11.84□□□□□ -0.51
CKAP2-205ENST00000468284 KIF6Q6ZMV9 814 aa11.84□□□□□ -0.51
CKAP2-205ENST00000468284 PPP1R42Q7Z4L9 355 aa11.84□□□□□ -0.51
CKAP2-205ENST00000468284 IFT43Q96FT9 208 aa11.84□□□□□ -0.51
CKAP2-205ENST00000468284 C11orf16Q9NQ32 467 aa11.84□□□□□ -0.51
CKAP2-205ENST00000468284 PTPN22Q9Y2R2 807 aa11.84□□□□□ -0.51
CKAP2-205ENST00000468284 SCN9AQ15858 1988 aa11.83□□□□□ -0.52
CKAP2-205ENST00000468284 SASH3O75995 380 aa11.83□□□□□ -0.52
CKAP2-205ENST00000468284 H2AFB1P0C5Y9 115 aa11.83□□□□□ -0.52
CKAP2-205ENST00000468284 H2AFB2P0C5Z0 115 aa11.83□□□□□ -0.52
CKAP2-205ENST00000468284 PRKAR2BP31323 418 aa11.83□□□□□ -0.52
CKAP2-205ENST00000468284 FKBP1BP68106 108 aa11.83□□□□□ -0.52
CKAP2-205ENST00000468284 GRAPQ13588 217 aa11.83□□□□□ -0.52
CKAP2-205ENST00000468284 PRKG1Q13976 671 aa11.83□□□□□ -0.52
CKAP2-205ENST00000468284 PERM1Q5SV97 790 aa11.83□□□□□ -0.52
CKAP2-205ENST00000468284 GRAPLQ8TC17 118 aaPredicted RBP11.83□□□□□ -0.52
CKAP2-205ENST00000468284 FAM200AQ8TCP9 573 aa11.83□□□□□ -0.52
CKAP2-205ENST00000468284 THUMPD2Q9BTF0 503 aaKnown RBP11.83□□□□□ -0.52
CKAP2-205ENST00000468284 FZD1Q9UP38 647 aa11.83□□□□□ -0.52
CKAP2-205ENST00000468284 LRRC37AA6NMS7 1700 aa11.83□□□□□ -0.52
CKAP2-205ENST00000468284 ZBTB42B2RXF5 422 aa11.82□□□□□ -0.52
CKAP2-205ENST00000468284 GPLD1P80108 840 aa11.82□□□□□ -0.52
CKAP2-205ENST00000468284 GPSM2P81274 684 aa11.82□□□□□ -0.52
CKAP2-205ENST00000468284 PTPN12Q05209 780 aaKnown RBP11.82□□□□□ -0.52
CKAP2-205ENST00000468284 CNGB1Q14028 1251 aaPredicted RBP11.82□□□□□ -0.52
CKAP2-205ENST00000468284 CC2D1BQ5T0F9 858 aaKnown RBP11.82□□□□□ -0.52
CKAP2-205ENST00000468284 ELMSAN1Q6PJG2 1045 aa11.82□□□□□ -0.52
CKAP2-205ENST00000468284 CD99L2Q8TCZ2 262 aa11.82□□□□□ -0.52
CKAP2-205ENST00000468284 CELF1Q92879 486 aaKnown RBP11.82□□□□□ -0.52
CKAP2-205ENST00000468284 ARMC5Q96C12 935 aa11.82□□□□□ -0.52
CKAP2-205ENST00000468284 UTP14AQ9BVJ6 771 aaKnown RBP11.82□□□□□ -0.52
CKAP2-205ENST00000468284 ANKRD36CQ5JPF3 1778 aa11.82□□□□□ -0.52
CKAP2-205ENST00000468284 VIL1P09327 827 aaKnown RBP11.81□□□□□ -0.52
CKAP2-205ENST00000468284 ZNF280AP59817 542 aaPredicted RBP11.81□□□□□ -0.52
CKAP2-205ENST00000468284 GRIK5Q16478 980 aa11.81□□□□□ -0.52
CKAP2-205ENST00000468284 DDX46Q7L014 1031 aaKnown RBP11.81□□□□□ -0.52
CKAP2-205ENST00000468284 DTWD1Q8N5C7 304 aa11.81□□□□□ -0.52
CKAP2-205ENST00000468284 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.81□□□□□ -0.52
CKAP2-205ENST00000468284 IGF2BP3O00425 579 aaKnown RBP eCLIP11.8□□□□□ -0.52
CKAP2-205ENST00000468284 HSPA5P11021 654 aaKnown RBP11.8□□□□□ -0.52
CKAP2-205ENST00000468284 SREBF2Q12772 1141 aa11.8□□□□□ -0.52
CKAP2-205ENST00000468284 KDM3BQ7LBC6 1761 aa11.79□□□□□ -0.52
CKAP2-205ENST00000468284 WTIPA6NIX2 430 aaPredicted RBP11.79□□□□□ -0.52
CKAP2-205ENST00000468284 SOX1O00570 391 aaPredicted RBP11.79□□□□□ -0.52
CKAP2-205ENST00000468284 ANXA1P04083 346 aa11.79□□□□□ -0.52
CKAP2-205ENST00000468284 ARID4AP29374 1257 aaPredicted RBP11.79□□□□□ -0.52
CKAP2-205ENST00000468284 PLAURQ03405 335 aa11.79□□□□□ -0.52
CKAP2-205ENST00000468284 NBPF9Q3BBW0 867 aa11.79□□□□□ -0.52
CKAP2-205ENST00000468284 PARP10Q53GL7 1025 aa11.79□□□□□ -0.52
CKAP2-205ENST00000468284 LRP10Q7Z4F1 713 aa11.79□□□□□ -0.52
CKAP2-205ENST00000468284 WFDC8Q8IUA0 241 aa11.79□□□□□ -0.52
CKAP2-205ENST00000468284 RTF1Q92541 710 aaKnown RBP11.79□□□□□ -0.52
CKAP2-205ENST00000468284 TP53INP1Q96A56 240 aa11.79□□□□□ -0.52
CKAP2-205ENST00000468284 ZNF333Q96JL9 665 aa11.79□□□□□ -0.52
CKAP2-205ENST00000468284 MYOZ2Q9NPC6 264 aa11.79□□□□□ -0.52
CKAP2-205ENST00000468284 LRFN2Q9ULH4 789 aa11.79□□□□□ -0.52
CKAP2-205ENST00000468284 USP20Q9Y2K6 914 aa11.79□□□□□ -0.52
CKAP2-205ENST00000468284 ZNF609O15014 1411 aa11.78□□□□□ -0.52
CKAP2-205ENST00000468284 OPLAHO14841 1288 aa11.78□□□□□ -0.52
CKAP2-205ENST00000468284 RFX1P22670 979 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms