RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 ERCC3P19447 782 aa13.69□□□□□ -0.22
CDHR3-205ENST00000468143 RGS2P41220 211 aa13.69□□□□□ -0.22
CDHR3-205ENST00000468143 GJA8P48165 433 aa13.69□□□□□ -0.22
CDHR3-205ENST00000468143 MAP2K5Q13163 448 aa13.69□□□□□ -0.22
CDHR3-205ENST00000468143 TMEM132BQ14DG7 1078 aa13.69□□□□□ -0.22
CDHR3-205ENST00000468143 NCAPG2Q86XI2 1143 aa13.69□□□□□ -0.22
CDHR3-205ENST00000468143 U2AF1L4Q8WU68 220 aaKnown RBP13.69□□□□□ -0.22
CDHR3-205ENST00000468143 SHISA4Q96DD7 197 aa13.69□□□□□ -0.22
CDHR3-205ENST00000468143 DEFB118Q96PH6 123 aa13.69□□□□□ -0.22
CDHR3-205ENST00000468143 IL17RBQ9NRM6 502 aa13.69□□□□□ -0.22
CDHR3-205ENST00000468143 IVNS1ABPQ9Y6Y0 642 aa13.69□□□□□ -0.22
CDHR3-205ENST00000468143 SLC15A5A6NIM6 579 aa13.68□□□□□ -0.22
CDHR3-205ENST00000468143 HIP1O00291 1037 aa13.68□□□□□ -0.22
CDHR3-205ENST00000468143 VWA5AO00534 786 aa13.68□□□□□ -0.22
CDHR3-205ENST00000468143 SGPL1O95470 568 aa13.68□□□□□ -0.22
CDHR3-205ENST00000468143 TFRCP02786 760 aaKnown RBP13.68□□□□□ -0.22
CDHR3-205ENST00000468143 XRCC5P13010 732 aaKnown RBP13.68□□□□□ -0.22
CDHR3-205ENST00000468143 SLC4A3P48751 1232 aa13.68□□□□□ -0.22
CDHR3-205ENST00000468143 MFAP1P55081 439 aaKnown RBP13.68□□□□□ -0.22
CDHR3-205ENST00000468143 SLFN13Q68D06 897 aa13.68□□□□□ -0.22
CDHR3-205ENST00000468143 MB21D1Q8N884 522 aa13.68□□□□□ -0.22
CDHR3-205ENST00000468143 NPLOC4Q8TAT6 608 aa13.68□□□□□ -0.22
CDHR3-205ENST00000468143 NKX2-3Q8TAU0 364 aa13.68□□□□□ -0.22
CDHR3-205ENST00000468143 NBPF3Q9H094 633 aa13.68□□□□□ -0.22
CDHR3-205ENST00000468143 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.68□□□□□ -0.22
CDHR3-205ENST00000468143 IL25Q9H293 177 aa13.68□□□□□ -0.22
CDHR3-205ENST00000468143 PPP1R9AQ9ULJ8 1098 aa13.68□□□□□ -0.22
CDHR3-205ENST00000468143 ISY1Q9ULR0 285 aaKnown RBP13.68□□□□□ -0.22
CDHR3-205ENST00000468143 ADAMTS5Q9UNA0 930 aa13.68□□□□□ -0.22
CDHR3-205ENST00000468143 STX8Q9UNK0 236 aa13.68□□□□□ -0.22
CDHR3-205ENST00000468143 MTMR7Q9Y216 660 aa13.68□□□□□ -0.22
CDHR3-205ENST00000468143 MYH8P13535 1937 aa13.68□□□□□ -0.22
CDHR3-205ENST00000468143 ORC4O43929 436 aa13.67□□□□□ -0.22
CDHR3-205ENST00000468143 FGRP09769 529 aa13.67□□□□□ -0.22
CDHR3-205ENST00000468143 ZKSCAN1P17029 563 aaPredicted RBP13.67□□□□□ -0.22
CDHR3-205ENST00000468143 SKAP1Q86WV1 359 aa13.67□□□□□ -0.22
CDHR3-205ENST00000468143 TBC1D10CQ8IV04 446 aa13.67□□□□□ -0.22
CDHR3-205ENST00000468143 KIFC2Q96AC6 838 aa13.67□□□□□ -0.22
CDHR3-205ENST00000468143 APBA2Q99767 749 aa13.67□□□□□ -0.22
CDHR3-205ENST00000468143 SLF1Q9BQI6 1058 aa13.67□□□□□ -0.22
CDHR3-205ENST00000468143 HMX1Q9NP08 348 aaPredicted RBP13.67□□□□□ -0.22
CDHR3-205ENST00000468143 FLRT1Q9NZU1 646 aa13.67□□□□□ -0.22
CDHR3-205ENST00000468143 PCDH10Q9P2E7 1040 aa13.67□□□□□ -0.22
CDHR3-205ENST00000468143 RPTORQ8N122 1335 aa13.66□□□□□ -0.22
CDHR3-205ENST00000468143 ZNF213O14771 459 aa13.66□□□□□ -0.22
CDHR3-205ENST00000468143 BMP3P12645 472 aa13.66□□□□□ -0.22
CDHR3-205ENST00000468143 PRKAR2AP13861 404 aaKnown RBP13.66□□□□□ -0.22
CDHR3-205ENST00000468143 MCCP23508 829 aa13.66□□□□□ -0.22
CDHR3-205ENST00000468143 ADORA2AP29274 412 aa13.66□□□□□ -0.22
CDHR3-205ENST00000468143 STAT3P40763 770 aa13.66□□□□□ -0.22
CDHR3-205ENST00000468143 CACNB2Q08289 660 aaPredicted RBP13.66□□□□□ -0.22
CDHR3-205ENST00000468143 GRB14Q14449 540 aa13.66□□□□□ -0.22
CDHR3-205ENST00000468143 AKNAD1Q5T1N1 836 aa13.66□□□□□ -0.22
CDHR3-205ENST00000468143 MFSD6Q6ZSS7 791 aa13.66□□□□□ -0.22
CDHR3-205ENST00000468143 RASGRP2Q7LDG7 609 aa13.66□□□□□ -0.22
CDHR3-205ENST00000468143 DPP9Q86TI2 863 aa13.66□□□□□ -0.22
CDHR3-205ENST00000468143 CPXCR1Q8N123 301 aa13.66□□□□□ -0.22
CDHR3-205ENST00000468143 GMCL1P1Q8NEA9 526 aa13.66□□□□□ -0.22
CDHR3-205ENST00000468143 SHCBP1Q8NEM2 672 aa13.66□□□□□ -0.22
CDHR3-205ENST00000468143 PAK6Q9NQU5 681 aaPredicted RBP13.66□□□□□ -0.22
CDHR3-205ENST00000468143 PLIN4Q96Q06 1357 aa13.66□□□□□ -0.22
CDHR3-205ENST00000468143 PLXNB2O15031 1838 aa13.65□□□□□ -0.22
CDHR3-205ENST00000468143 TMEM232C9JQI7 657 aa13.65□□□□□ -0.22
CDHR3-205ENST00000468143 STRNO43815 780 aa13.65□□□□□ -0.22
CDHR3-205ENST00000468143 COBLO75128 1261 aa13.65□□□□□ -0.22
CDHR3-205ENST00000468143 CCND3P30281 292 aaPredicted RBP13.65□□□□□ -0.22
CDHR3-205ENST00000468143 TRMT44Q8IYL2 757 aaKnown RBP13.65□□□□□ -0.22
CDHR3-205ENST00000468143 PRPF38AQ8NAV1 312 aaKnown RBP13.65□□□□□ -0.22
CDHR3-205ENST00000468143 REPS2Q8NFH8 660 aa13.65□□□□□ -0.22
CDHR3-205ENST00000468143 MROH8Q9H579 483 aa13.65□□□□□ -0.22
CDHR3-205ENST00000468143 RAVER2Q9HCJ3 691 aaKnown RBP13.65□□□□□ -0.22
CDHR3-205ENST00000468143 FEM1BQ9UK73 627 aa13.65□□□□□ -0.22
CDHR3-205ENST00000468143 ZNF214Q9UL59 606 aaPredicted RBP13.65□□□□□ -0.22
CDHR3-205ENST00000468143 CTDP1Q9Y5B0 961 aaPredicted RBP13.65□□□□□ -0.22
CDHR3-205ENST00000468143 ZMYM6O95789 1325 aa13.64□□□□□ -0.23
CDHR3-205ENST00000468143 GREB1LQ9C091 1923 aaPredicted RBP13.64□□□□□ -0.23
CDHR3-205ENST00000468143 HTTP42858 3142 aa13.64□□□□□ -0.23
CDHR3-205ENST00000468143 ZBED4O75132 1171 aa13.64□□□□□ -0.23
CDHR3-205ENST00000468143 SLC25A27O95847 323 aa13.64□□□□□ -0.23
CDHR3-205ENST00000468143 FCER1AP12319 257 aa13.64□□□□□ -0.23
CDHR3-205ENST00000468143 CHMLP26374 656 aa13.64□□□□□ -0.23
CDHR3-205ENST00000468143 CYP2C19P33261 490 aa13.64□□□□□ -0.23
CDHR3-205ENST00000468143 SLC1A4P43007 532 aa13.64□□□□□ -0.23
CDHR3-205ENST00000468143 IKQ13123 557 aaPredicted RBP13.64□□□□□ -0.23
CDHR3-205ENST00000468143 MAP3K21Q5TCX8 1036 aa13.64□□□□□ -0.23
CDHR3-205ENST00000468143 KCTD1Q719H9 257 aa13.64□□□□□ -0.23
CDHR3-205ENST00000468143 RIOX2Q8IUF8 465 aa13.64□□□□□ -0.23
CDHR3-205ENST00000468143 STAG1Q8WVM7 1258 aa13.64□□□□□ -0.23
CDHR3-205ENST00000468143 ZKSCAN3Q9BRR0 538 aa13.64□□□□□ -0.23
CDHR3-205ENST00000468143 DSCC1Q9BVC3 393 aa13.64□□□□□ -0.23
CDHR3-205ENST00000468143 SYNPO2Q9UMS6 1093 aa13.64□□□□□ -0.23
CDHR3-205ENST00000468143 RIPK3Q9Y572 518 aa13.64□□□□□ -0.23
CDHR3-205ENST00000468143 NEDD4P46934 1319 aa13.64□□□□□ -0.23
CDHR3-205ENST00000468143 DOCK3Q8IZD9 2030 aa13.63□□□□□ -0.23
CDHR3-205ENST00000468143 RLFQ13129 1914 aa13.63□□□□□ -0.23
CDHR3-205ENST00000468143 PGK2P07205 417 aa13.63□□□□□ -0.23
CDHR3-205ENST00000468143 HOXC6P09630 235 aa13.63□□□□□ -0.23
CDHR3-205ENST00000468143 SNAP25P60880 206 aa13.63□□□□□ -0.23
CDHR3-205ENST00000468143 PPP4R3BQ5MIZ7 849 aa13.63□□□□□ -0.23
CDHR3-205ENST00000468143 MFSD14CQ5VZR4 134 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms