RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 VPS54Q9P1Q0 977 aa11.68□□□□□ -0.54
MSH5-213ENST00000468136 FAM198AQ9UFP1 575 aa11.68□□□□□ -0.54
MSH5-213ENST00000468136 KCNJ14Q9UNX9 436 aa11.68□□□□□ -0.54
MSH5-213ENST00000468136 SRPRBQ9Y5M8 271 aaKnown RBP11.68□□□□□ -0.54
MSH5-213ENST00000468136 MYH6P13533 1939 aa11.68□□□□□ -0.54
MSH5-213ENST00000468136 SCN9AQ15858 1988 aa11.67□□□□□ -0.54
MSH5-213ENST00000468136 DCAF8L1A6NGE4 600 aa11.67□□□□□ -0.54
MSH5-213ENST00000468136 PSMD14O00487 310 aa11.67□□□□□ -0.54
MSH5-213ENST00000468136 ZBTB7AO95365 584 aa11.67□□□□□ -0.54
MSH5-213ENST00000468136 PDHBP11177 359 aa11.67□□□□□ -0.54
MSH5-213ENST00000468136 AKR1B1P15121 316 aa11.67□□□□□ -0.54
MSH5-213ENST00000468136 TNNI2P48788 182 aa11.67□□□□□ -0.54
MSH5-213ENST00000468136 NFIAQ12857 509 aa11.67□□□□□ -0.54
MSH5-213ENST00000468136 SNW1Q13573 536 aaKnown RBP11.67□□□□□ -0.54
MSH5-213ENST00000468136 TNFAIP1Q13829 316 aa11.67□□□□□ -0.54
MSH5-213ENST00000468136 SPDYE2Q495Y8 402 aa11.67□□□□□ -0.54
MSH5-213ENST00000468136 RESP18Q5W5W9 173 aa11.67□□□□□ -0.54
MSH5-213ENST00000468136 FAM200AQ8TCP9 573 aa11.67□□□□□ -0.54
MSH5-213ENST00000468136 DPF2Q92785 391 aa11.67□□□□□ -0.54
MSH5-213ENST00000468136 TNFRSF25Q93038 417 aa11.67□□□□□ -0.54
MSH5-213ENST00000468136 SDF4Q9BRK5 362 aa11.67□□□□□ -0.54
MSH5-213ENST00000468136 PDGFDQ9GZP0 370 aaPredicted RBP11.67□□□□□ -0.54
MSH5-213ENST00000468136 ZMYND12Q9H0C1 365 aa11.67□□□□□ -0.54
MSH5-213ENST00000468136 KCNQ5Q9NR82 932 aa11.67□□□□□ -0.54
MSH5-213ENST00000468136 ZNF277Q9NRM2 450 aaPredicted RBP11.67□□□□□ -0.54
MSH5-213ENST00000468136 GJB4Q9NTQ9 266 aa11.67□□□□□ -0.54
MSH5-213ENST00000468136 ANO10Q9NW15 660 aa11.67□□□□□ -0.54
MSH5-213ENST00000468136 ZNF646O15015 1829 aaPredicted RBP11.67□□□□□ -0.54
MSH5-213ENST00000468136 SYKP43405 635 aa11.66□□□□□ -0.54
MSH5-213ENST00000468136 TYRO3Q06418 890 aa11.66□□□□□ -0.54
MSH5-213ENST00000468136 ZNF543Q08ER8 600 aa11.66□□□□□ -0.54
MSH5-213ENST00000468136 STX1AQ16623 288 aa11.66□□□□□ -0.54
MSH5-213ENST00000468136 SLC4A8Q2Y0W8 1093 aa11.66□□□□□ -0.54
MSH5-213ENST00000468136 RBM26Q5T8P6 1007 aaKnown RBP11.66□□□□□ -0.54
MSH5-213ENST00000468136 KRT25Q7Z3Z0 450 aa11.66□□□□□ -0.54
MSH5-213ENST00000468136 CMTR1Q8N1G2 835 aaKnown RBP11.66□□□□□ -0.54
MSH5-213ENST00000468136 GMCL1P1Q8NEA9 526 aa11.66□□□□□ -0.54
MSH5-213ENST00000468136 HOOK2Q96ED9 719 aa11.66□□□□□ -0.54
MSH5-213ENST00000468136 PRMT6Q96LA8 375 aaPredicted RBP11.66□□□□□ -0.54
MSH5-213ENST00000468136 NAP1L4Q99733 375 aaKnown RBP11.66□□□□□ -0.54
MSH5-213ENST00000468136 SGIP1Q9BQI5 828 aa11.66□□□□□ -0.54
MSH5-213ENST00000468136 CLIP2Q9UDT6 1046 aa11.66□□□□□ -0.54
MSH5-213ENST00000468136 HPSEQ9Y251 543 aa11.66□□□□□ -0.54
MSH5-213ENST00000468136 GREB1LQ9C091 1923 aaPredicted RBP11.65□□□□□ -0.54
MSH5-213ENST00000468136 CCDC194A0A1B0GVG4 234 aa11.65□□□□□ -0.54
MSH5-213ENST00000468136 STXBP3O00186 592 aa11.65□□□□□ -0.54
MSH5-213ENST00000468136 MPHOSPH10O00566 681 aaKnown RBP11.65□□□□□ -0.54
MSH5-213ENST00000468136 ZNF202O95125 648 aa11.65□□□□□ -0.54
MSH5-213ENST00000468136 TOB1P50616 345 aaPredicted RBP11.65□□□□□ -0.54
MSH5-213ENST00000468136 EIF6P56537 245 aaKnown RBP11.65□□□□□ -0.54
MSH5-213ENST00000468136 ZNF280AP59817 542 aaPredicted RBP11.65□□□□□ -0.54
MSH5-213ENST00000468136 NR5A1Q13285 461 aa11.65□□□□□ -0.54
MSH5-213ENST00000468136 ABCB5Q2M3G0 1257 aa11.65□□□□□ -0.54
MSH5-213ENST00000468136 TTC38Q5R3I4 469 aa11.65□□□□□ -0.54
MSH5-213ENST00000468136 STAG2Q8N3U4 1231 aa11.65□□□□□ -0.54
MSH5-213ENST00000468136 TRIM44Q96DX7 344 aaPredicted RBP11.65□□□□□ -0.54
MSH5-213ENST00000468136 GMCL1Q96IK5 515 aa11.65□□□□□ -0.54
MSH5-213ENST00000468136 ZBED3Q96IU2 234 aaPredicted RBP11.65□□□□□ -0.54
MSH5-213ENST00000468136 FTOQ9C0B1 505 aaKnown RBP eCLIP11.65□□□□□ -0.54
MSH5-213ENST00000468136 SH2D4AQ9H788 454 aa11.65□□□□□ -0.54
MSH5-213ENST00000468136 TDRD3Q9H7E2 651 aaKnown RBP11.65□□□□□ -0.54
MSH5-213ENST00000468136 ZNF70Q9UC06 446 aaPredicted RBP11.65□□□□□ -0.54
MSH5-213ENST00000468136 MYH8P13535 1937 aa11.64□□□□□ -0.55
MSH5-213ENST00000468136 PNMA6FA0A0J9YX94 578 aa11.64□□□□□ -0.55
MSH5-213ENST00000468136 DDTLA6NHG4 134 aaPredicted RBP11.64□□□□□ -0.55
MSH5-213ENST00000468136 CYTH3O43739 400 aa11.64□□□□□ -0.55
MSH5-213ENST00000468136 RAD17O75943 681 aa11.64□□□□□ -0.55
MSH5-213ENST00000468136 PFKFB1P16118 471 aa11.64□□□□□ -0.55
MSH5-213ENST00000468136 NDUFA8P51970 172 aa11.64□□□□□ -0.55
MSH5-213ENST00000468136 NAPAP54920 295 aa11.64□□□□□ -0.55
MSH5-213ENST00000468136 ATP2C1P98194 919 aaPredicted RBP11.64□□□□□ -0.55
MSH5-213ENST00000468136 MAP3K10Q02779 954 aa11.64□□□□□ -0.55
MSH5-213ENST00000468136 CXCL9Q07325 125 aa11.64□□□□□ -0.55
MSH5-213ENST00000468136 SEMA3FQ13275 785 aa11.64□□□□□ -0.55
MSH5-213ENST00000468136 NPY5RQ15761 445 aa11.64□□□□□ -0.55
MSH5-213ENST00000468136 CT47A1Q5JQC4 288 aaPredicted RBP11.64□□□□□ -0.55
MSH5-213ENST00000468136 HEATR3Q7Z4Q2 680 aa11.64□□□□□ -0.55
MSH5-213ENST00000468136 MTMR8Q96EF0 704 aa11.64□□□□□ -0.55
MSH5-213ENST00000468136 PDLIM2Q96JY6 352 aa11.64□□□□□ -0.55
MSH5-213ENST00000468136 CSRNP1Q96S65 589 aa11.64□□□□□ -0.55
MSH5-213ENST00000468136 GOLPH3LQ9H4A5 285 aa11.64□□□□□ -0.55
MSH5-213ENST00000468136 ARHGEF10LQ9HCE6 1279 aa11.64□□□□□ -0.55
MSH5-213ENST00000468136 KIAA1468Q9P260 1216 aa11.64□□□□□ -0.55
MSH5-213ENST00000468136 FBXO2Q9UK22 296 aaPredicted RBP11.64□□□□□ -0.55
MSH5-213ENST00000468136 KCNH3Q9ULD8 1083 aa11.64□□□□□ -0.55
MSH5-213ENST00000468136 ATF5Q9Y2D1 282 aaPredicted RBP11.64□□□□□ -0.55
MSH5-213ENST00000468136 A0A1B0GVL5 298 aa11.63□□□□□ -0.55
MSH5-213ENST00000468136 USP17L5A8MUK1 530 aa11.63□□□□□ -0.55
MSH5-213ENST00000468136 M0R2N6 131 aa11.63□□□□□ -0.55
MSH5-213ENST00000468136 MARCKSP29966 332 aaPredicted RBP11.63□□□□□ -0.55
MSH5-213ENST00000468136 LONP1P36776 959 aaKnown RBP11.63□□□□□ -0.55
MSH5-213ENST00000468136 TXLNAP40222 546 aa11.63□□□□□ -0.55
MSH5-213ENST00000468136 PRPHP41219 470 aa11.63□□□□□ -0.55
MSH5-213ENST00000468136 MRPL12P52815 198 aaKnown RBP11.63□□□□□ -0.55
MSH5-213ENST00000468136 ICA1Q05084 483 aa11.63□□□□□ -0.55
MSH5-213ENST00000468136 TCP10Q12799 353 aa11.63□□□□□ -0.55
MSH5-213ENST00000468136 WWC2Q6AWC2 1192 aa11.63□□□□□ -0.55
MSH5-213ENST00000468136 USP17L2Q6R6M4 530 aa11.63□□□□□ -0.55
MSH5-213ENST00000468136 SH3BP5LQ7L8J4 393 aa11.63□□□□□ -0.55
MSH5-213ENST00000468136 CEP57L1Q8IYX8 460 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms