RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 NPHS2Q9NP85 383 aa6.23□□□□□ -1.41
SSR3-204ENST00000467733 EGFL7Q9UHF1 273 aa6.23□□□□□ -1.41
SSR3-204ENST00000467733 PCOLCE2Q9UKZ9 415 aa6.23□□□□□ -1.41
SSR3-204ENST00000467733 TRAK1Q9UPV9 953 aa6.23□□□□□ -1.41
SSR3-204ENST00000467733 SNX11Q9Y5W9 270 aa6.23□□□□□ -1.41
SSR3-204ENST00000467733 PIK3C2GO75747 1445 aa6.23□□□□□ -1.41
SSR3-204ENST00000467733 YTHDC2Q9H6S0 1430 aaKnown RBP6.23□□□□□ -1.41
SSR3-204ENST00000467733 SPATA31A1Q5TZJ5 1347 aa6.23□□□□□ -1.41
SSR3-204ENST00000467733 AKAP12Q02952 1782 aa6.22□□□□□ -1.41
SSR3-204ENST00000467733 LRRC10BA6NIK2 292 aa6.22□□□□□ -1.41
SSR3-204ENST00000467733 RNGTTO60942 597 aaKnown RBP6.22□□□□□ -1.41
SSR3-204ENST00000467733 GSTP1P09211 210 aaKnown RBP6.22□□□□□ -1.41
SSR3-204ENST00000467733 MESP2Q0VG99 397 aa6.22□□□□□ -1.41
SSR3-204ENST00000467733 TTLL4Q14679 1199 aa6.22□□□□□ -1.41
SSR3-204ENST00000467733 USPL1Q5W0Q7 1092 aa6.22□□□□□ -1.41
SSR3-204ENST00000467733 WDR89Q96FK6 387 aaPredicted RBP6.22□□□□□ -1.41
SSR3-204ENST00000467733 PPP1R16BQ96T49 567 aa6.22□□□□□ -1.41
SSR3-204ENST00000467733 DISC1Q9NRI5 854 aa6.22□□□□□ -1.41
SSR3-204ENST00000467733 PCDHGC5Q9Y5F6 944 aa6.22□□□□□ -1.41
SSR3-204ENST00000467733 LMO7Q8WWI1 1683 aa6.22□□□□□ -1.41
SSR3-204ENST00000467733 SHANK3Q9BYB0 1731 aa6.22□□□□□ -1.41
SSR3-204ENST00000467733 LRRC37A3O60309 1634 aa6.21□□□□□ -1.41
SSR3-204ENST00000467733 CARNS1A5YM72 827 aa6.21□□□□□ -1.42
SSR3-204ENST00000467733 NDUFB5O43674 189 aa6.21□□□□□ -1.42
SSR3-204ENST00000467733 ZNF862O60290 1169 aa6.21□□□□□ -1.42
SSR3-204ENST00000467733 CD96P40200 585 aa6.21□□□□□ -1.42
SSR3-204ENST00000467733 KCNMB1Q16558 191 aa6.21□□□□□ -1.42
SSR3-204ENST00000467733 ASB11Q8WXH4 323 aa6.21□□□□□ -1.42
SSR3-204ENST00000467733 TOX2Q96NM4 488 aa6.21□□□□□ -1.42
SSR3-204ENST00000467733 TNKS2Q9H2K2 1166 aa6.21□□□□□ -1.42
SSR3-204ENST00000467733 ANO2Q9NQ90 1003 aa6.21□□□□□ -1.42
SSR3-204ENST00000467733 STK26Q9P289 416 aa6.21□□□□□ -1.42
SSR3-204ENST00000467733 U3KQE9 123 aa6.21□□□□□ -1.42
SSR3-204ENST00000467733 ADGRF5Q8IZF2 1346 aa6.21□□□□□ -1.42
SSR3-204ENST00000467733 TULP4Q9NRJ4 1543 aa6.2□□□□□ -1.42
SSR3-204ENST00000467733 ANKRD30BQ9BXX2 1392 aa6.2□□□□□ -1.42
SSR3-204ENST00000467733 SPATA31E1Q6ZUB1 1445 aa6.2□□□□□ -1.42
SSR3-204ENST00000467733 SSH2Q76I76 1423 aa6.2□□□□□ -1.42
SSR3-204ENST00000467733 TMEM238LA0A1B0GVL6 79 aa6.2□□□□□ -1.42
SSR3-204ENST00000467733 LEFTY1O75610 366 aa6.2□□□□□ -1.42
SSR3-204ENST00000467733 HCLS1P14317 486 aaPredicted RBP6.2□□□□□ -1.42
SSR3-204ENST00000467733 PPP2R3AQ06190 1150 aa6.2□□□□□ -1.42
SSR3-204ENST00000467733 ZC3H12CQ9C0D7 883 aaKnown RBP6.2□□□□□ -1.42
SSR3-204ENST00000467733 DNAJC25Q9H1X3 360 aa6.2□□□□□ -1.42
SSR3-204ENST00000467733 PRDM11Q9NQV5 511 aa6.2□□□□□ -1.42
SSR3-204ENST00000467733 PLAGL2Q9UPG8 496 aa6.2□□□□□ -1.42
SSR3-204ENST00000467733 ATP7BP35670 1465 aa6.2□□□□□ -1.42
SSR3-204ENST00000467733 GPRASP1Q5JY77 1395 aa6.19□□□□□ -1.42
SSR3-204ENST00000467733 OVOS2A0A0G2JMS6 1433 aa6.19□□□□□ -1.42
SSR3-204ENST00000467733 OVOS2A0A0J9YW53 1432 aa6.19□□□□□ -1.42
SSR3-204ENST00000467733 OVOS2Q6IE36 1432 aa6.19□□□□□ -1.42
SSR3-204ENST00000467733 ICMTO60725 284 aa6.19□□□□□ -1.42
SSR3-204ENST00000467733 TSPAN15O95858 294 aa6.19□□□□□ -1.42
SSR3-204ENST00000467733 ITIH2P19823 946 aa6.19□□□□□ -1.42
SSR3-204ENST00000467733 RAP1GAPP47736 663 aa6.19□□□□□ -1.42
SSR3-204ENST00000467733 PHLDB3Q6NSJ2 640 aa6.19□□□□□ -1.42
SSR3-204ENST00000467733 TOP6BLQ8N6T0 577 aa6.19□□□□□ -1.42
SSR3-204ENST00000467733 SSU72Q9NP77 194 aaKnown RBP6.19□□□□□ -1.42
SSR3-204ENST00000467733 GTF2IRD1Q9UHL9 959 aa6.19□□□□□ -1.42
SSR3-204ENST00000467733 EIF3AQ14152 1382 aaKnown RBP6.18□□□□□ -1.42
SSR3-204ENST00000467733 KIAA0232Q92628 1395 aa6.18□□□□□ -1.42
SSR3-204ENST00000467733 MAP3K5Q99683 1374 aa6.18□□□□□ -1.42
SSR3-204ENST00000467733 TOPAZ1Q8N9V7 1692 aa6.18□□□□□ -1.42
SSR3-204ENST00000467733 LOC105371045A0A1W2PR82 267 aa6.18□□□□□ -1.42
SSR3-204ENST00000467733 GADD45BO75293 160 aaPredicted RBP6.18□□□□□ -1.42
SSR3-204ENST00000467733 FAAP100Q0VG06 881 aa6.18□□□□□ -1.42
SSR3-204ENST00000467733 ORC1Q13415 861 aa6.18□□□□□ -1.42
SSR3-204ENST00000467733 IKZF1Q13422 519 aa6.18□□□□□ -1.42
SSR3-204ENST00000467733 MLANAQ16655 118 aa6.18□□□□□ -1.42
SSR3-204ENST00000467733 GLYCTKQ8IVS8 523 aa6.18□□□□□ -1.42
SSR3-204ENST00000467733 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.18□□□□□ -1.42
SSR3-204ENST00000467733 ZSCAN18Q8TBC5 510 aaPredicted RBP6.18□□□□□ -1.42
SSR3-204ENST00000467733 CCDC74AQ96AQ1 378 aa6.18□□□□□ -1.42
SSR3-204ENST00000467733 CITED4Q96RK1 184 aa6.18□□□□□ -1.42
SSR3-204ENST00000467733 FAM129BQ96TA1 746 aa6.18□□□□□ -1.42
SSR3-204ENST00000467733 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.18□□□□□ -1.42
SSR3-204ENST00000467733 PAPPAQ13219 1627 aa6.17□□□□□ -1.42
SSR3-204ENST00000467733 COL24A1Q17RW2 1714 aa6.17□□□□□ -1.42
SSR3-204ENST00000467733 QSER1Q2KHR3 1735 aa6.17□□□□□ -1.42
SSR3-204ENST00000467733 ZNF503-AS2A6NEH8 195 aa6.17□□□□□ -1.42
SSR3-204ENST00000467733 H3BRB1 525 aa6.17□□□□□ -1.42
SSR3-204ENST00000467733 IGF2BP3O00425 579 aaKnown RBP eCLIP6.17□□□□□ -1.42
SSR3-204ENST00000467733 ZBTB7AO95365 584 aa6.17□□□□□ -1.42
SSR3-204ENST00000467733 NEFMP07197 916 aa6.17□□□□□ -1.42
SSR3-204ENST00000467733 ERVK-24P63145 666 aa6.17□□□□□ -1.42
SSR3-204ENST00000467733 ZP2Q05996 745 aa6.17□□□□□ -1.42
SSR3-204ENST00000467733 TMEM132EQ6IEE7 984 aa6.17□□□□□ -1.42
SSR3-204ENST00000467733 RNF214Q8ND24 703 aa6.17□□□□□ -1.42
SSR3-204ENST00000467733 PMFBP1Q8TBY8 1022 aa6.17□□□□□ -1.42
SSR3-204ENST00000467733 CCER1Q8TC90 406 aaPredicted RBP6.17□□□□□ -1.42
SSR3-204ENST00000467733 ISL2Q96A47 359 aa6.17□□□□□ -1.42
SSR3-204ENST00000467733 SYT17Q9BSW7 474 aa6.17□□□□□ -1.42
SSR3-204ENST00000467733 TUT1Q9H6E5 874 aaKnown RBP6.17□□□□□ -1.42
SSR3-204ENST00000467733 TMEM39AQ9NV64 488 aa6.17□□□□□ -1.42
SSR3-204ENST00000467733 GPN3Q9UHW5 284 aaPredicted RBP6.17□□□□□ -1.42
SSR3-204ENST00000467733 DHX57Q6P158 1386 aaKnown RBP6.17□□□□□ -1.42
SSR3-204ENST00000467733 BRD1O95696 1058 aa6.16□□□□□ -1.42
SSR3-204ENST00000467733 ITGAEP38570 1179 aa6.16□□□□□ -1.42
SSR3-204ENST00000467733 AFMP43652 599 aa6.16□□□□□ -1.42
SSR3-204ENST00000467733 ZNF157P51786 506 aaPredicted RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms