RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 CALM3P0DP25 149 aa7.99□□□□□ -1.13
SCAF4-204ENST00000467731 SNHG28P0DPA3 235 aa7.99□□□□□ -1.13
SCAF4-204ENST00000467731 CUL4AQ13619 759 aa7.99□□□□□ -1.13
SCAF4-204ENST00000467731 RTN1Q16799 776 aa7.99□□□□□ -1.13
SCAF4-204ENST00000467731 KIAA1755Q5JYT7 1200 aa7.99□□□□□ -1.13
SCAF4-204ENST00000467731 ERO1BQ86YB8 467 aa7.99□□□□□ -1.13
SCAF4-204ENST00000467731 STAG2Q8N3U4 1231 aa7.99□□□□□ -1.13
SCAF4-204ENST00000467731 GMCL1P1Q8NEA9 526 aa7.99□□□□□ -1.13
SCAF4-204ENST00000467731 CTCFLQ8NI51 663 aaPredicted RBP7.99□□□□□ -1.13
SCAF4-204ENST00000467731 WDR18Q9BV38 432 aa7.99□□□□□ -1.13
SCAF4-204ENST00000467731 GOPCQ9HD26 462 aa7.99□□□□□ -1.13
SCAF4-204ENST00000467731 FOXD4L1Q9NU39 408 aa7.99□□□□□ -1.13
SCAF4-204ENST00000467731 MAD2L2Q9UI95 211 aa7.99□□□□□ -1.13
SCAF4-204ENST00000467731 SYNPO2Q9UMS6 1093 aa7.99□□□□□ -1.13
SCAF4-204ENST00000467731 AFG3L2Q9Y4W6 797 aa7.99□□□□□ -1.13
SCAF4-204ENST00000467731 SPDYE5A6NIY4 337 aa7.98□□□□□ -1.13
SCAF4-204ENST00000467731 IRF6O14896 467 aa7.98□□□□□ -1.13
SCAF4-204ENST00000467731 NDUFB10O96000 172 aa7.98□□□□□ -1.13
SCAF4-204ENST00000467731 GOLGA8HP0CJ92 632 aa7.98□□□□□ -1.13
SCAF4-204ENST00000467731 SLC1A4P43007 532 aa7.98□□□□□ -1.13
SCAF4-204ENST00000467731 BACE1P56817 501 aa7.98□□□□□ -1.13
SCAF4-204ENST00000467731 HUNKP57058 714 aa7.98□□□□□ -1.13
SCAF4-204ENST00000467731 PPATQ06203 517 aa7.98□□□□□ -1.13
SCAF4-204ENST00000467731 SLFN13Q68D06 897 aa7.98□□□□□ -1.13
SCAF4-204ENST00000467731 CMTR1Q8N1G2 835 aaKnown RBP7.98□□□□□ -1.13
SCAF4-204ENST00000467731 CCDC82Q8N4S0 544 aa7.98□□□□□ -1.13
SCAF4-204ENST00000467731 OPTNQ96CV9 577 aa7.98□□□□□ -1.13
SCAF4-204ENST00000467731 MAP3K14Q99558 947 aa7.98□□□□□ -1.13
SCAF4-204ENST00000467731 KIAA1683Q9H0B3 1180 aa7.98□□□□□ -1.13
SCAF4-204ENST00000467731 VCPKMTQ9H867 229 aa7.98□□□□□ -1.13
SCAF4-204ENST00000467731 FRMPD2Q68DX3 1309 aaPredicted RBP7.98□□□□□ -1.13
SCAF4-204ENST00000467731 UNCXA6NJT0 531 aa7.98□□□□□ -1.13
SCAF4-204ENST00000467731 CPLX1O14810 134 aa7.98□□□□□ -1.13
SCAF4-204ENST00000467731 PLEKHA8P1O95397 391 aa7.98□□□□□ -1.13
SCAF4-204ENST00000467731 PARP1P09874 1014 aaKnown RBP7.98□□□□□ -1.13
SCAF4-204ENST00000467731 KIF5BP33176 963 aa7.98□□□□□ -1.13
SCAF4-204ENST00000467731 GRM4Q14833 912 aa7.98□□□□□ -1.13
SCAF4-204ENST00000467731 KCTD1Q719H9 257 aa7.98□□□□□ -1.13
SCAF4-204ENST00000467731 SAPCD2Q86UD0 394 aa7.98□□□□□ -1.13
SCAF4-204ENST00000467731 SLC10A4Q96EP9 437 aa7.98□□□□□ -1.13
SCAF4-204ENST00000467731 NUP88Q99567 741 aaPredicted RBP7.98□□□□□ -1.13
SCAF4-204ENST00000467731 PARP14Q460N5 1801 aa7.98□□□□□ -1.13
SCAF4-204ENST00000467731 CCDC196A0A1B0GTZ2 297 aa7.98□□□□□ -1.13
SCAF4-204ENST00000467731 DHX16O60231 1041 aaKnown RBP7.98□□□□□ -1.13
SCAF4-204ENST00000467731 CTDNEP1O95476 244 aa7.98□□□□□ -1.13
SCAF4-204ENST00000467731 HMGCS2P54868 508 aa7.98□□□□□ -1.13
SCAF4-204ENST00000467731 FSTL1Q12841 308 aa7.98□□□□□ -1.13
SCAF4-204ENST00000467731 PPP2R5BQ15173 497 aa7.98□□□□□ -1.13
SCAF4-204ENST00000467731 NTRK3Q16288 839 aa7.98□□□□□ -1.13
SCAF4-204ENST00000467731 CCDC96Q2M329 555 aa7.98□□□□□ -1.13
SCAF4-204ENST00000467731 NBPF11Q86T75 865 aa7.98□□□□□ -1.13
SCAF4-204ENST00000467731 GMCL1Q96IK5 515 aa7.98□□□□□ -1.13
SCAF4-204ENST00000467731 CPVLQ9H3G5 476 aa7.98□□□□□ -1.13
SCAF4-204ENST00000467731 EMILIN3Q9NT22 766 aa7.98□□□□□ -1.13
SCAF4-204ENST00000467731 RBM28Q9NW13 759 aaKnown RBP7.98□□□□□ -1.13
SCAF4-204ENST00000467731 ISY1Q9ULR0 285 aaKnown RBP7.98□□□□□ -1.13
SCAF4-204ENST00000467731 LOC285556D6RIA3 1793 aa7.97□□□□□ -1.13
SCAF4-204ENST00000467731 PALM3A6NDB9 673 aaPredicted RBP7.97□□□□□ -1.13
SCAF4-204ENST00000467731 JAK2O60674 1132 aa7.97□□□□□ -1.13
SCAF4-204ENST00000467731 GJA5P36382 358 aa7.97□□□□□ -1.13
SCAF4-204ENST00000467731 USP14P54578 494 aa7.97□□□□□ -1.13
SCAF4-204ENST00000467731 ZNF543Q08ER8 600 aa7.97□□□□□ -1.13
SCAF4-204ENST00000467731 ASPRV1Q53RT3 343 aa7.97□□□□□ -1.13
SCAF4-204ENST00000467731 TMTC3Q6ZXV5 915 aa7.97□□□□□ -1.13
SCAF4-204ENST00000467731 NSUN7Q8NE18 718 aaKnown RBP7.97□□□□□ -1.13
SCAF4-204ENST00000467731 DCAF4Q8WV16 495 aa7.97□□□□□ -1.13
SCAF4-204ENST00000467731 PHKBQ93100 1093 aa7.97□□□□□ -1.13
SCAF4-204ENST00000467731 RNF216Q9NWF9 866 aaPredicted RBP7.97□□□□□ -1.13
SCAF4-204ENST00000467731 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.97□□□□□ -1.13
SCAF4-204ENST00000467731 C19orf81C9J6K1 198 aa7.97□□□□□ -1.13
SCAF4-204ENST00000467731 KLRF2D3W0D1 207 aa7.97□□□□□ -1.13
SCAF4-204ENST00000467731 BMP3P12645 472 aa7.97□□□□□ -1.13
SCAF4-204ENST00000467731 VCAM1P19320 739 aa7.97□□□□□ -1.13
SCAF4-204ENST00000467731 PPIL2Q13356 520 aa7.97□□□□□ -1.13
SCAF4-204ENST00000467731 FAM83BQ5T0W9 1011 aa7.97□□□□□ -1.13
SCAF4-204ENST00000467731 GPATCH4Q5T3I0 446 aaKnown RBP7.97□□□□□ -1.13
SCAF4-204ENST00000467731 SRBD1Q8N5C6 995 aaKnown RBP7.97□□□□□ -1.13
SCAF4-204ENST00000467731 LPAR1Q92633 364 aa7.97□□□□□ -1.13
SCAF4-204ENST00000467731 INTS4Q96HW7 963 aaKnown RBP7.97□□□□□ -1.13
SCAF4-204ENST00000467731 GPCPD1Q9NPB8 672 aa7.97□□□□□ -1.13
SCAF4-204ENST00000467731 SMCHD1A6NHR9 2005 aa7.96□□□□□ -1.13
SCAF4-204ENST00000467731 TMEM88BA6NKF7 163 aa7.96□□□□□ -1.13
SCAF4-204ENST00000467731 CYTH3O43739 400 aa7.96□□□□□ -1.13
SCAF4-204ENST00000467731 IFNAR1P17181 557 aa7.96□□□□□ -1.13
SCAF4-204ENST00000467731 FUT2Q10981 343 aa7.96□□□□□ -1.13
SCAF4-204ENST00000467731 MKRN3Q13064 507 aaKnown RBP7.96□□□□□ -1.13
SCAF4-204ENST00000467731 TTBK2Q6IQ55 1244 aa7.96□□□□□ -1.13
SCAF4-204ENST00000467731 CPLX2Q6PUV4 134 aaKnown RBP7.96□□□□□ -1.13
SCAF4-204ENST00000467731 UBA5Q9GZZ9 404 aa7.96□□□□□ -1.13
SCAF4-204ENST00000467731 RLFQ13129 1914 aa7.96□□□□□ -1.13
SCAF4-204ENST00000467731 CNTNAP5Q8WYK1 1306 aa7.96□□□□□ -1.14
SCAF4-204ENST00000467731 A0A0G2JLL6 359 aaPredicted RBP7.96□□□□□ -1.14
SCAF4-204ENST00000467731 PTPDC1A2A3K4 754 aa7.96□□□□□ -1.14
SCAF4-204ENST00000467731 TMEM232C9JQI7 657 aa7.96□□□□□ -1.14
SCAF4-204ENST00000467731 SLC16A2P36021 539 aa7.96□□□□□ -1.14
SCAF4-204ENST00000467731 STAT2P52630 851 aa7.96□□□□□ -1.14
SCAF4-204ENST00000467731 SLC35G1Q2M3R5 365 aa7.96□□□□□ -1.14
SCAF4-204ENST00000467731 SH3D19Q5HYK7 790 aa7.96□□□□□ -1.14
SCAF4-204ENST00000467731 PRRT2Q7Z6L0 340 aaPredicted RBP7.96□□□□□ -1.14
SCAF4-204ENST00000467731 SMARCC2Q8TAQ2 1214 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms