RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 PIAS4Q8N2W9 510 aaPredicted RBP16.02■□□□□ 0.16
SSBP1-206ENST00000467681 FBXO28Q9NVF7 368 aa16.02■□□□□ 0.16
SSBP1-206ENST00000467681 TRIM17Q9Y577 477 aa16.02■□□□□ 0.16
SSBP1-206ENST00000467681 LOC285556D6RIA3 1793 aa16.02■□□□□ 0.15
SSBP1-206ENST00000467681 MYPNQ86TC9 1320 aa16.01■□□□□ 0.15
SSBP1-206ENST00000467681 CNMDO75829 334 aa16.01■□□□□ 0.15
SSBP1-206ENST00000467681 FMNL1O95466 1100 aaPredicted RBP16.01■□□□□ 0.15
SSBP1-206ENST00000467681 BMP3P12645 472 aa16.01■□□□□ 0.15
SSBP1-206ENST00000467681 HOXD10P28358 340 aa16.01■□□□□ 0.15
SSBP1-206ENST00000467681 SLC1A4P43007 532 aa16.01■□□□□ 0.15
SSBP1-206ENST00000467681 FCGRTP55899 365 aa16.01■□□□□ 0.15
SSBP1-206ENST00000467681 RALYLQ86SE5 291 aaKnown RBP16.01■□□□□ 0.15
SSBP1-206ENST00000467681 MB21D1Q8N884 522 aa16.01■□□□□ 0.15
SSBP1-206ENST00000467681 ENAHQ8N8S7 591 aaPredicted RBP16.01■□□□□ 0.15
SSBP1-206ENST00000467681 KCNB2Q92953 911 aa16.01■□□□□ 0.15
SSBP1-206ENST00000467681 TRIM47Q96LD4 638 aa16.01■□□□□ 0.15
SSBP1-206ENST00000467681 UBAC1Q9BSL1 405 aa16.01■□□□□ 0.15
SSBP1-206ENST00000467681 FEM1BQ9UK73 627 aa16.01■□□□□ 0.15
SSBP1-206ENST00000467681 PPP1R9AQ9ULJ8 1098 aa16.01■□□□□ 0.15
SSBP1-206ENST00000467681 EPB41L2O43491 1005 aaKnown RBP16■□□□□ 0.15
SSBP1-206ENST00000467681 PLA2G6O60733 806 aa16■□□□□ 0.15
SSBP1-206ENST00000467681 ERVK-9P63128 1117 aa16■□□□□ 0.15
SSBP1-206ENST00000467681 ERVK-24P63145 666 aa16■□□□□ 0.15
SSBP1-206ENST00000467681 SEC23AQ15436 765 aa16■□□□□ 0.15
SSBP1-206ENST00000467681 MB21D2Q8IYB1 491 aaPredicted RBP16■□□□□ 0.15
SSBP1-206ENST00000467681 TNS4Q8IZW8 715 aa16■□□□□ 0.15
SSBP1-206ENST00000467681 PRPF38AQ8NAV1 312 aaKnown RBP16■□□□□ 0.15
SSBP1-206ENST00000467681 DCAF4Q8WV16 495 aa16■□□□□ 0.15
SSBP1-206ENST00000467681 ATG4CQ96DT6 458 aa16■□□□□ 0.15
SSBP1-206ENST00000467681 SLF1Q9BQI6 1058 aa16■□□□□ 0.15
SSBP1-206ENST00000467681 PAGR1Q9BTK6 254 aa16■□□□□ 0.15
SSBP1-206ENST00000467681 MCOLN1Q9GZU1 580 aa16■□□□□ 0.15
SSBP1-206ENST00000467681 BTBD7Q9P203 1132 aa16■□□□□ 0.15
SSBP1-206ENST00000467681 DOCK3Q8IZD9 2030 aa15.99■□□□□ 0.15
SSBP1-206ENST00000467681 VWA5AO00534 786 aa15.99■□□□□ 0.15
SSBP1-206ENST00000467681 ECM2O94769 699 aaPredicted RBP15.99■□□□□ 0.15
SSBP1-206ENST00000467681 HSPA4P34932 840 aa15.99■□□□□ 0.15
SSBP1-206ENST00000467681 PRMT2P55345 433 aa15.99■□□□□ 0.15
SSBP1-206ENST00000467681 CCNA1P78396 465 aa15.99■□□□□ 0.15
SSBP1-206ENST00000467681 RASEFQ8IZ41 740 aa15.99■□□□□ 0.15
SSBP1-206ENST00000467681 IGDCC4Q8TDY8 1250 aa15.99■□□□□ 0.15
SSBP1-206ENST00000467681 CHURC1Q8WUH1 139 aa15.99■□□□□ 0.15
SSBP1-206ENST00000467681 USP26Q9BXU7 913 aa15.99■□□□□ 0.15
SSBP1-206ENST00000467681 SRRDQ9UH36 339 aa15.99■□□□□ 0.15
SSBP1-206ENST00000467681 PTPN22Q9Y2R2 807 aa15.99■□□□□ 0.15
SSBP1-206ENST00000467681 TNKSO95271 1327 aa15.98■□□□□ 0.15
SSBP1-206ENST00000467681 TMEM232C9JQI7 657 aa15.98■□□□□ 0.15
SSBP1-206ENST00000467681 IFIT3O14879 490 aaKnown RBP15.98■□□□□ 0.15
SSBP1-206ENST00000467681 ZKSCAN1P17029 563 aaPredicted RBP15.98■□□□□ 0.15
SSBP1-206ENST00000467681 ANTXR2P58335 489 aa15.98■□□□□ 0.15
SSBP1-206ENST00000467681 FBXO46Q6PJ61 603 aaPredicted RBP15.98■□□□□ 0.15
SSBP1-206ENST00000467681 SAMD1Q6SPF0 538 aaPredicted RBP15.98■□□□□ 0.15
SSBP1-206ENST00000467681 FAM160B2Q86V87 743 aa15.98■□□□□ 0.15
SSBP1-206ENST00000467681 CHMP4CQ96CF2 233 aa15.98■□□□□ 0.15
SSBP1-206ENST00000467681 MTA3Q9BTC8 594 aa15.98■□□□□ 0.15
SSBP1-206ENST00000467681 KAT14Q9H8E8 782 aa15.98■□□□□ 0.15
SSBP1-206ENST00000467681 MTMR7Q9Y216 660 aa15.98■□□□□ 0.15
SSBP1-206ENST00000467681 TNPO2O14787 897 aaKnown RBP15.97■□□□□ 0.15
SSBP1-206ENST00000467681 SNHG28P0DPA3 235 aa15.97■□□□□ 0.15
SSBP1-206ENST00000467681 PDHBP11177 359 aa15.97■□□□□ 0.15
SSBP1-206ENST00000467681 MAPK4P31152 587 aa15.97■□□□□ 0.15
SSBP1-206ENST00000467681 MCM5P33992 734 aa15.97■□□□□ 0.15
SSBP1-206ENST00000467681 KRT32Q14532 448 aa15.97■□□□□ 0.15
SSBP1-206ENST00000467681 IFIT1BQ5T764 474 aaKnown RBP15.97■□□□□ 0.15
SSBP1-206ENST00000467681 BTNL9Q6UXG8 535 aa15.97■□□□□ 0.15
SSBP1-206ENST00000467681 KCTD1Q719H9 257 aa15.97■□□□□ 0.15
SSBP1-206ENST00000467681 CHST3Q7LGC8 479 aa15.97■□□□□ 0.15
SSBP1-206ENST00000467681 PNMA1Q8ND90 353 aa15.97■□□□□ 0.15
SSBP1-206ENST00000467681 REPS2Q8NFH8 660 aa15.97■□□□□ 0.15
SSBP1-206ENST00000467681 KIFC2Q96AC6 838 aa15.97■□□□□ 0.15
SSBP1-206ENST00000467681 COA7Q96BR5 231 aa15.97■□□□□ 0.15
SSBP1-206ENST00000467681 SPATC1LQ9H0A9 340 aa15.97■□□□□ 0.15
SSBP1-206ENST00000467681 PORCNQ9H237 461 aa15.97■□□□□ 0.15
SSBP1-206ENST00000467681 GJD2Q9UKL4 321 aa15.97■□□□□ 0.15
SSBP1-206ENST00000467681 MYH4Q9Y623 1939 aa15.96■□□□□ 0.15
SSBP1-206ENST00000467681 ERICH2A1L162 156 aa15.96■□□□□ 0.15
SSBP1-206ENST00000467681 ZBED4O75132 1171 aa15.96■□□□□ 0.15
SSBP1-206ENST00000467681 FDX1P10109 184 aa15.96■□□□□ 0.15
SSBP1-206ENST00000467681 STAT3P40763 770 aa15.96■□□□□ 0.15
SSBP1-206ENST00000467681 ZNF543Q08ER8 600 aa15.96■□□□□ 0.15
SSBP1-206ENST00000467681 COL9A3Q14050 684 aaPredicted RBP15.96■□□□□ 0.15
SSBP1-206ENST00000467681 TMEM132BQ14DG7 1078 aa15.96■□□□□ 0.15
SSBP1-206ENST00000467681 SART3Q15020 963 aaKnown RBP15.96■□□□□ 0.15
SSBP1-206ENST00000467681 TTBK2Q6IQ55 1244 aa15.96■□□□□ 0.15
SSBP1-206ENST00000467681 CCAR1Q8IX12 1150 aaKnown RBP15.96■□□□□ 0.15
SSBP1-206ENST00000467681 TMTC2Q8N394 836 aa15.96■□□□□ 0.15
SSBP1-206ENST00000467681 NEK1Q96PY6 1258 aa15.96■□□□□ 0.15
SSBP1-206ENST00000467681 MOV10L1Q9BXT6 1211 aaKnown RBP15.96■□□□□ 0.15
SSBP1-206ENST00000467681 ISY1Q9ULR0 285 aaKnown RBP15.96■□□□□ 0.15
SSBP1-206ENST00000467681 ATP2A1O14983 1001 aa15.95■□□□□ 0.14
SSBP1-206ENST00000467681 PRC1O43663 620 aa15.95■□□□□ 0.14
SSBP1-206ENST00000467681 STAT2P52630 851 aa15.95■□□□□ 0.14
SSBP1-206ENST00000467681 EXOSC10Q01780 885 aaKnown RBP15.95■□□□□ 0.14
SSBP1-206ENST00000467681 PLS1Q14651 629 aa15.95■□□□□ 0.14
SSBP1-206ENST00000467681 WTAPQ15007 396 aa15.95■□□□□ 0.14
SSBP1-206ENST00000467681 CCDC96Q2M329 555 aa15.95■□□□□ 0.14
SSBP1-206ENST00000467681 TMEM67Q5HYA8 995 aa15.95■□□□□ 0.14
SSBP1-206ENST00000467681 PLEKHH3Q7Z736 793 aa15.95■□□□□ 0.14
SSBP1-206ENST00000467681 SHCBP1Q8NEM2 672 aa15.95■□□□□ 0.14
SSBP1-206ENST00000467681 TMEM87BQ96K49 555 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms