RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 AKR1B1P15121 316 aa16.75■□□□□ 0.27
CCHCR1-211ENST00000467553 DSG3P32926 999 aa16.75■□□□□ 0.27
CCHCR1-211ENST00000467553 ICA1Q05084 483 aa16.75■□□□□ 0.27
CCHCR1-211ENST00000467553 NMIQ13287 307 aaPredicted RBP16.75■□□□□ 0.27
CCHCR1-211ENST00000467553 CCL14Q16627 93 aa16.75■□□□□ 0.27
CCHCR1-211ENST00000467553 MCMDC2Q4G0Z9 681 aa16.75■□□□□ 0.27
CCHCR1-211ENST00000467553 OLFML2BQ68BL8 750 aa16.75■□□□□ 0.27
CCHCR1-211ENST00000467553 SPATC1LQ9H0A9 340 aa16.75■□□□□ 0.27
CCHCR1-211ENST00000467553 NAPBQ9H115 298 aa16.75■□□□□ 0.27
CCHCR1-211ENST00000467553 MROH8Q9H579 483 aa16.75■□□□□ 0.27
CCHCR1-211ENST00000467553 VCPKMTQ9H867 229 aa16.75■□□□□ 0.27
CCHCR1-211ENST00000467553 KANSL2Q9H9L4 492 aa16.75■□□□□ 0.27
CCHCR1-211ENST00000467553 MKNK2Q9HBH9 465 aa16.75■□□□□ 0.27
CCHCR1-211ENST00000467553 SDSP20132 328 aa16.74■□□□□ 0.27
CCHCR1-211ENST00000467553 CCND3P30281 292 aaPredicted RBP16.74■□□□□ 0.27
CCHCR1-211ENST00000467553 DPP9Q86TI2 863 aa16.74■□□□□ 0.27
CCHCR1-211ENST00000467553 GDF15Q99988 308 aa16.74■□□□□ 0.27
CCHCR1-211ENST00000467553 RLFQ13129 1914 aa16.74■□□□□ 0.27
CCHCR1-211ENST00000467553 A0A0G2JMZ2 1700 aa16.73■□□□□ 0.27
CCHCR1-211ENST00000467553 A0A0D9SFI3 127 aa16.73■□□□□ 0.27
CCHCR1-211ENST00000467553 SLC25A27O95847 323 aa16.73■□□□□ 0.27
CCHCR1-211ENST00000467553 IGHA2P01877 340 aa16.73■□□□□ 0.27
CCHCR1-211ENST00000467553 VPS53Q5VIR6 699 aa16.73■□□□□ 0.27
CCHCR1-211ENST00000467553 GPR153Q6NV75 609 aa16.73■□□□□ 0.27
CCHCR1-211ENST00000467553 SIAH1Q8IUQ4 282 aa16.73■□□□□ 0.27
CCHCR1-211ENST00000467553 C7orf61Q8IZ16 206 aa16.73■□□□□ 0.27
CCHCR1-211ENST00000467553 MOV10L1Q9BXT6 1211 aaKnown RBP16.73■□□□□ 0.27
CCHCR1-211ENST00000467553 DDX20Q9UHI6 824 aaKnown RBP16.73■□□□□ 0.27
CCHCR1-211ENST00000467553 FLOT1O75955 427 aa16.72■□□□□ 0.27
CCHCR1-211ENST00000467553 COPB2P35606 906 aa16.72■□□□□ 0.27
CCHCR1-211ENST00000467553 TICAM2Q86XR7 235 aa16.72■□□□□ 0.27
CCHCR1-211ENST00000467553 ZNF444Q8N0Y2 327 aaPredicted RBP16.72■□□□□ 0.27
CCHCR1-211ENST00000467553 ZNF287Q9HBT7 754 aa16.72■□□□□ 0.27
CCHCR1-211ENST00000467553 GOPCQ9HD26 462 aa16.72■□□□□ 0.27
CCHCR1-211ENST00000467553 ADAMTS5Q9UNA0 930 aa16.72■□□□□ 0.27
CCHCR1-211ENST00000467553 FRMPD3Q5JV73 1810 aa16.72■□□□□ 0.27
CCHCR1-211ENST00000467553 LAMA3Q16787 3333 aa16.72■□□□□ 0.27
CCHCR1-211ENST00000467553 PFASO15067 1338 aa16.71■□□□□ 0.27
CCHCR1-211ENST00000467553 PRDM1O75626 825 aa16.71■□□□□ 0.27
CCHCR1-211ENST00000467553 ERCC3P19447 782 aa16.71■□□□□ 0.27
CCHCR1-211ENST00000467553 ADORA2AP29274 412 aa16.71■□□□□ 0.27
CCHCR1-211ENST00000467553 CWC27Q6UX04 472 aaKnown RBP16.71■□□□□ 0.27
CCHCR1-211ENST00000467553 CLEC10AQ8IUN9 316 aa16.71■□□□□ 0.27
CCHCR1-211ENST00000467553 DIAPH3Q9NSV4 1193 aa16.71■□□□□ 0.27
CCHCR1-211ENST00000467553 FLRT1Q9NZU1 646 aa16.71■□□□□ 0.27
CCHCR1-211ENST00000467553 DNAH12Q6ZR08 3092 aa16.71■□□□□ 0.26
CCHCR1-211ENST00000467553 DNM1LO00429 736 aa16.7■□□□□ 0.26
CCHCR1-211ENST00000467553 SLC3A2P08195 630 aaKnown RBP16.7■□□□□ 0.26
CCHCR1-211ENST00000467553 EEF2P13639 858 aaKnown RBP16.7■□□□□ 0.26
CCHCR1-211ENST00000467553 RASA1P20936 1047 aa16.7■□□□□ 0.26
CCHCR1-211ENST00000467553 PPARAQ07869 468 aa16.7■□□□□ 0.26
CCHCR1-211ENST00000467553 TTC22Q5TAA0 569 aa16.7■□□□□ 0.26
CCHCR1-211ENST00000467553 ZNF589Q86UQ0 364 aaPredicted RBP16.7■□□□□ 0.26
CCHCR1-211ENST00000467553 ARRDC4Q8NCT1 418 aa16.7■□□□□ 0.26
CCHCR1-211ENST00000467553 NPLOC4Q8TAT6 608 aa16.7■□□□□ 0.26
CCHCR1-211ENST00000467553 NRBP1Q9UHY1 535 aa16.7■□□□□ 0.26
CCHCR1-211ENST00000467553 PARP14Q460N5 1801 aa16.7■□□□□ 0.26
CCHCR1-211ENST00000467553 ZNFX1Q9P2E3 1918 aaKnown RBP16.69■□□□□ 0.26
CCHCR1-211ENST00000467553 HIP1O00291 1037 aa16.69■□□□□ 0.26
CCHCR1-211ENST00000467553 FOXP2O15409 715 aa16.69■□□□□ 0.26
CCHCR1-211ENST00000467553 FCER1AP12319 257 aa16.69■□□□□ 0.26
CCHCR1-211ENST00000467553 CYBAP13498 195 aa16.69■□□□□ 0.26
CCHCR1-211ENST00000467553 CNGA1P29973 690 aa16.69■□□□□ 0.26
CCHCR1-211ENST00000467553 CTDSPL2Q05D32 466 aa16.69■□□□□ 0.26
CCHCR1-211ENST00000467553 PDE4BQ07343 736 aa16.69■□□□□ 0.26
CCHCR1-211ENST00000467553 SYNPO2Q9UMS6 1093 aa16.69■□□□□ 0.26
CCHCR1-211ENST00000467553 DIS3Q9Y2L1 958 aaKnown RBP16.69■□□□□ 0.26
CCHCR1-211ENST00000467553 CCDC171Q6TFL3 1326 aa16.69■□□□□ 0.26
CCHCR1-211ENST00000467553 SEPT4O43236 478 aa16.68■□□□□ 0.26
CCHCR1-211ENST00000467553 RAD21O60216 631 aa16.68■□□□□ 0.26
CCHCR1-211ENST00000467553 FGAP02671 866 aa16.68■□□□□ 0.26
CCHCR1-211ENST00000467553 HSPD1P10809 573 aaKnown RBP16.68■□□□□ 0.26
CCHCR1-211ENST00000467553 GSPT1P15170 499 aaKnown RBP16.68■□□□□ 0.26
CCHCR1-211ENST00000467553 CYP2C19P33261 490 aa16.68■□□□□ 0.26
CCHCR1-211ENST00000467553 MFAP1P55081 439 aaKnown RBP16.68■□□□□ 0.26
CCHCR1-211ENST00000467553 PLS1Q14651 629 aa16.68■□□□□ 0.26
CCHCR1-211ENST00000467553 ALX1Q15699 326 aa16.68■□□□□ 0.26
CCHCR1-211ENST00000467553 LRIT3Q3SXY7 679 aa16.68■□□□□ 0.26
CCHCR1-211ENST00000467553 KIAA1755Q5JYT7 1200 aa16.68■□□□□ 0.26
CCHCR1-211ENST00000467553 NCAPG2Q86XI2 1143 aa16.68■□□□□ 0.26
CCHCR1-211ENST00000467553 SPICE1Q8N0Z3 855 aa16.68■□□□□ 0.26
CCHCR1-211ENST00000467553 ATG4CQ96DT6 458 aa16.68■□□□□ 0.26
CCHCR1-211ENST00000467553 INCENPQ9NQS7 918 aa16.68■□□□□ 0.26
CCHCR1-211ENST00000467553 NYAP2Q9P242 653 aa16.68■□□□□ 0.26
CCHCR1-211ENST00000467553 ZMYND8Q9ULU4 1186 aaPredicted RBP16.68■□□□□ 0.26
CCHCR1-211ENST00000467553 ROBO3Q96MS0 1386 aa16.67■□□□□ 0.26
CCHCR1-211ENST00000467553 GREB1LQ9C091 1923 aaPredicted RBP16.67■□□□□ 0.26
CCHCR1-211ENST00000467553 TMEM132BQ14DG7 1078 aa16.67■□□□□ 0.26
CCHCR1-211ENST00000467553 RIOX2Q8IUF8 465 aa16.67■□□□□ 0.26
CCHCR1-211ENST00000467553 TDHQ8IZJ6 230 aa16.67■□□□□ 0.26
CCHCR1-211ENST00000467553 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.67■□□□□ 0.26
CCHCR1-211ENST00000467553 SENP6Q9GZR1 1112 aaPredicted RBP16.67■□□□□ 0.26
CCHCR1-211ENST00000467553 PPP1R9AQ9ULJ8 1098 aa16.67■□□□□ 0.26
CCHCR1-211ENST00000467553 VWA5AO00534 786 aa16.66■□□□□ 0.26
CCHCR1-211ENST00000467553 COBLO75128 1261 aa16.66■□□□□ 0.26
CCHCR1-211ENST00000467553 NEFLP07196 543 aa16.66■□□□□ 0.26
CCHCR1-211ENST00000467553 TSPY3P0CV98 308 aa16.66■□□□□ 0.26
CCHCR1-211ENST00000467553 TSPY8P0CW00 308 aa16.66■□□□□ 0.26
CCHCR1-211ENST00000467553 STAT3P40763 770 aa16.66■□□□□ 0.26
CCHCR1-211ENST00000467553 MAGEA10P43363 369 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms