RNA–Protein interactions for RNA: ENST00000467529.5

TMEM254-209, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 1,963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-209ENST00000467529 PDHBP11177 359 aa10.31□□□□□ -0.76
TMEM254-209ENST00000467529 PTPREP23469 700 aa10.31□□□□□ -0.76
TMEM254-209ENST00000467529 CALML3P27482 149 aa10.31□□□□□ -0.76
TMEM254-209ENST00000467529 SMARCA1P28370 1054 aa10.31□□□□□ -0.76
TMEM254-209ENST00000467529 GRIN1Q05586 938 aa10.31□□□□□ -0.76
TMEM254-209ENST00000467529 ANO6Q4KMQ2 910 aa10.31□□□□□ -0.76
TMEM254-209ENST00000467529 WWC2Q6AWC2 1192 aa10.31□□□□□ -0.76
TMEM254-209ENST00000467529 TYW1BQ6NUM6 668 aa10.31□□□□□ -0.76
TMEM254-209ENST00000467529 CCDC17Q96LX7 622 aa10.31□□□□□ -0.76
TMEM254-209ENST00000467529 SDF4Q9BRK5 362 aa10.31□□□□□ -0.76
TMEM254-209ENST00000467529 NOL7Q9UMY1 257 aaKnown RBP10.31□□□□□ -0.76
TMEM254-209ENST00000467529 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.3□□□□□ -0.76
TMEM254-209ENST00000467529 STXBP3O00186 592 aa10.3□□□□□ -0.76
TMEM254-209ENST00000467529 WNT7AO00755 349 aa10.3□□□□□ -0.76
TMEM254-209ENST00000467529 ENTPD3O75355 529 aa10.3□□□□□ -0.76
TMEM254-209ENST00000467529 SNHG28P0DPA3 235 aa10.3□□□□□ -0.76
TMEM254-209ENST00000467529 SYKP43405 635 aa10.3□□□□□ -0.76
TMEM254-209ENST00000467529 DALRD3Q5D0E6 543 aaKnown RBP10.3□□□□□ -0.76
TMEM254-209ENST00000467529 HEATR3Q7Z4Q2 680 aa10.3□□□□□ -0.76
TMEM254-209ENST00000467529 FOXP4Q8IVH2 680 aaPredicted RBP10.3□□□□□ -0.76
TMEM254-209ENST00000467529 NIM1KQ8IY84 436 aa10.3□□□□□ -0.76
TMEM254-209ENST00000467529 BLIDQ8IZY5 108 aa10.3□□□□□ -0.76
TMEM254-209ENST00000467529 FAM200AQ8TCP9 573 aa10.3□□□□□ -0.76
TMEM254-209ENST00000467529 BARHL2Q9NY43 387 aa10.3□□□□□ -0.76
TMEM254-209ENST00000467529 ZNRF3Q9ULT6 936 aa10.3□□□□□ -0.76
TMEM254-209ENST00000467529 PCDHA4Q9UN74 947 aa10.3□□□□□ -0.76
TMEM254-209ENST00000467529 ZBTB12Q9Y330 459 aaPredicted RBP10.3□□□□□ -0.76
TMEM254-209ENST00000467529 MORC2Q9Y6X9 1032 aaPredicted RBP10.3□□□□□ -0.76
TMEM254-209ENST00000467529 FRMPD2Q68DX3 1309 aaPredicted RBP10.3□□□□□ -0.76
TMEM254-209ENST00000467529 BRCA1P38398 1863 aaKnown RBP10.3□□□□□ -0.76
TMEM254-209ENST00000467529 SPDYE2BA6NHP3 402 aa10.3□□□□□ -0.76
TMEM254-209ENST00000467529 SPDYE6P0CI01 402 aa10.3□□□□□ -0.76
TMEM254-209ENST00000467529 R3HDM1Q15032 1099 aaKnown RBP10.3□□□□□ -0.76
TMEM254-209ENST00000467529 CERKLQ49MI3 558 aaPredicted RBP10.3□□□□□ -0.76
TMEM254-209ENST00000467529 ASPRV1Q53RT3 343 aa10.3□□□□□ -0.76
TMEM254-209ENST00000467529 SPECC1Q5M775 1068 aa10.3□□□□□ -0.76
TMEM254-209ENST00000467529 TTC38Q5R3I4 469 aa10.3□□□□□ -0.76
TMEM254-209ENST00000467529 TATDN1Q6P1N9 297 aa10.3□□□□□ -0.76
TMEM254-209ENST00000467529 PIK3AP1Q6ZUJ8 805 aa10.3□□□□□ -0.76
TMEM254-209ENST00000467529 METTL16Q86W50 562 aaKnown RBP10.3□□□□□ -0.76
TMEM254-209ENST00000467529 ERCC4Q92889 916 aaPredicted RBP10.3□□□□□ -0.76
TMEM254-209ENST00000467529 RRP36Q96EU6 259 aaKnown RBP10.3□□□□□ -0.76
TMEM254-209ENST00000467529 TIGD1Q96MW7 591 aa10.3□□□□□ -0.76
TMEM254-209ENST00000467529 TRIM34Q9BYJ4 488 aa10.3□□□□□ -0.76
TMEM254-209ENST00000467529 UBA5Q9GZZ9 404 aa10.3□□□□□ -0.76
TMEM254-209ENST00000467529 CBX8Q9HC52 389 aa10.3□□□□□ -0.76
TMEM254-209ENST00000467529 VAT1LQ9HCJ6 419 aa10.3□□□□□ -0.76
TMEM254-209ENST00000467529 HDAC9Q9UKV0 1011 aa10.3□□□□□ -0.76
TMEM254-209ENST00000467529 SRPRBQ9Y5M8 271 aaKnown RBP10.3□□□□□ -0.76
TMEM254-209ENST00000467529 ATRNL1Q5VV63 1379 aa10.3□□□□□ -0.76
TMEM254-209ENST00000467529 MYH4Q9Y623 1939 aa10.3□□□□□ -0.76
TMEM254-209ENST00000467529 M0R2N6 131 aa10.29□□□□□ -0.76
TMEM254-209ENST00000467529 DLGAP5Q15398 846 aa10.29□□□□□ -0.76
TMEM254-209ENST00000467529 ZNF174Q15697 407 aa10.29□□□□□ -0.76
TMEM254-209ENST00000467529 SHROOM1Q2M3G4 852 aaPredicted RBP10.29□□□□□ -0.76
TMEM254-209ENST00000467529 HOMER1Q86YM7 354 aa10.29□□□□□ -0.76
TMEM254-209ENST00000467529 ZNF579Q8NAF0 562 aaKnown RBP10.29□□□□□ -0.76
TMEM254-209ENST00000467529 DAGLBQ8NCG7 672 aa10.29□□□□□ -0.76
TMEM254-209ENST00000467529 CCDC148Q8NFR7 591 aa10.29□□□□□ -0.76
TMEM254-209ENST00000467529 TRIM44Q96DX7 344 aaPredicted RBP10.29□□□□□ -0.76
TMEM254-209ENST00000467529 DNAJC25Q9H1X3 360 aa10.29□□□□□ -0.76
TMEM254-209ENST00000467529 RIOX1Q9H6W3 641 aa10.29□□□□□ -0.76
TMEM254-209ENST00000467529 PPP1R1BQ9UD71 204 aaPredicted RBP10.29□□□□□ -0.76
TMEM254-209ENST00000467529 USP25Q9UHP3 1055 aa10.29□□□□□ -0.76
TMEM254-209ENST00000467529 COL2A1P02458 1487 aaPredicted RBP10.29□□□□□ -0.76
TMEM254-209ENST00000467529 FER1L6Q2WGJ9 1857 aa10.29□□□□□ -0.76
TMEM254-209ENST00000467529 CLRN2A0PK11 232 aa10.28□□□□□ -0.76
TMEM254-209ENST00000467529 TCP10L2B9ZVM9 353 aa10.28□□□□□ -0.76
TMEM254-209ENST00000467529 BMP15O95972 392 aa10.28□□□□□ -0.76
TMEM254-209ENST00000467529 CLCN1P35523 988 aa10.28□□□□□ -0.76
TMEM254-209ENST00000467529 TRAPPC10P48553 1259 aa10.28□□□□□ -0.76
TMEM254-209ENST00000467529 ATP2B2Q01814 1243 aa10.28□□□□□ -0.76
TMEM254-209ENST00000467529 CXCL9Q07325 125 aa10.28□□□□□ -0.76
TMEM254-209ENST00000467529 ZNF543Q08ER8 600 aa10.28□□□□□ -0.76
TMEM254-209ENST00000467529 STX1AQ16623 288 aa10.28□□□□□ -0.76
TMEM254-209ENST00000467529 PPP4R3BQ5MIZ7 849 aa10.28□□□□□ -0.76
TMEM254-209ENST00000467529 GALNT17Q6IS24 598 aa10.28□□□□□ -0.76
TMEM254-209ENST00000467529 FAM177A1Q8N128 213 aaPredicted RBP10.28□□□□□ -0.76
TMEM254-209ENST00000467529 OGFOD1Q8N543 542 aa10.28□□□□□ -0.76
TMEM254-209ENST00000467529 AGBL3Q8NEM8 1001 aa10.28□□□□□ -0.76
TMEM254-209ENST00000467529 RASGRP4Q8TDF6 673 aa10.28□□□□□ -0.76
TMEM254-209ENST00000467529 PIGSQ96S52 555 aa10.28□□□□□ -0.76
TMEM254-209ENST00000467529 GPCPD1Q9NPB8 672 aa10.28□□□□□ -0.76
TMEM254-209ENST00000467529 TMOD2Q9NZR1 351 aa10.28□□□□□ -0.76
TMEM254-209ENST00000467529 KIAA1468Q9P260 1216 aa10.28□□□□□ -0.76
TMEM254-209ENST00000467529 ZNF70Q9UC06 446 aaPredicted RBP10.28□□□□□ -0.76
TMEM254-209ENST00000467529 KCNH3Q9ULD8 1083 aa10.28□□□□□ -0.76
TMEM254-209ENST00000467529 PCDHA6Q9UN73 950 aa10.28□□□□□ -0.76
TMEM254-209ENST00000467529 PCDHA8Q9Y5H6 950 aa10.28□□□□□ -0.76
TMEM254-209ENST00000467529 A0A087WWV3 80 aa10.28□□□□□ -0.76
TMEM254-209ENST00000467529 EEF2P13639 858 aaKnown RBP10.28□□□□□ -0.76
TMEM254-209ENST00000467529 ZNF165P49910 485 aa10.28□□□□□ -0.76
TMEM254-209ENST00000467529 NAPAP54920 295 aa10.28□□□□□ -0.76
TMEM254-209ENST00000467529 C11orf57Q6ZUT1 292 aaPredicted RBP10.28□□□□□ -0.76
TMEM254-209ENST00000467529 LUZP1Q86V48 1076 aa10.28□□□□□ -0.76
TMEM254-209ENST00000467529 MKL1Q969V6 931 aa10.28□□□□□ -0.76
TMEM254-209ENST00000467529 SGIP1Q9BQI5 828 aa10.28□□□□□ -0.76
TMEM254-209ENST00000467529 CSRNP2Q9H175 543 aa10.28□□□□□ -0.76
TMEM254-209ENST00000467529 TAOK3Q9H2K8 898 aa10.28□□□□□ -0.76
TMEM254-209ENST00000467529 KANSL2Q9H9L4 492 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms