RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 SETDB1Q15047 1291 aa7.33□□□□□ -1.24
PTCD3-207ENST00000467273 PKN2Q16513 984 aaKnown RBP7.33□□□□□ -1.24
PTCD3-207ENST00000467273 CIAPIN1Q6FI81 312 aa7.33□□□□□ -1.24
PTCD3-207ENST00000467273 SND1Q7KZF4 910 aaKnown RBP eCLIP7.33□□□□□ -1.24
PTCD3-207ENST00000467273 TTC5Q8N0Z6 440 aa7.33□□□□□ -1.24
PTCD3-207ENST00000467273 SYNE4Q8N205 404 aa7.33□□□□□ -1.24
PTCD3-207ENST00000467273 NSUN5Q96P11 429 aaKnown RBP7.33□□□□□ -1.24
PTCD3-207ENST00000467273 UBL7Q96S82 380 aaPredicted RBP7.33□□□□□ -1.24
PTCD3-207ENST00000467273 HINFPQ9BQA5 517 aa7.33□□□□□ -1.24
PTCD3-207ENST00000467273 VPS33BQ9H267 617 aa7.33□□□□□ -1.24
PTCD3-207ENST00000467273 SRA1Q9HD15 236 aaKnown RBP7.33□□□□□ -1.24
PTCD3-207ENST00000467273 ADARB2Q9NS39 739 aaKnown RBP7.33□□□□□ -1.24
PTCD3-207ENST00000467273 PGAP2Q9UHJ9 254 aa7.33□□□□□ -1.24
PTCD3-207ENST00000467273 ZNF652Q9Y2D9 606 aa7.33□□□□□ -1.24
PTCD3-207ENST00000467273 CELF2O95319 508 aaKnown RBP7.32□□□□□ -1.24
PTCD3-207ENST00000467273 SOX10P56693 466 aa7.32□□□□□ -1.24
PTCD3-207ENST00000467273 SLC39A6Q13433 755 aa7.32□□□□□ -1.24
PTCD3-207ENST00000467273 OCLNQ16625 522 aa7.32□□□□□ -1.24
PTCD3-207ENST00000467273 SULT6B1Q6IMI4 303 aa7.32□□□□□ -1.24
PTCD3-207ENST00000467273 TPTE2Q6XPS3 522 aa7.32□□□□□ -1.24
PTCD3-207ENST00000467273 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.32□□□□□ -1.24
PTCD3-207ENST00000467273 NBPF5PQ86XG9 351 aaPredicted RBP7.32□□□□□ -1.24
PTCD3-207ENST00000467273 MAP4K3Q8IVH8 894 aa7.32□□□□□ -1.24
PTCD3-207ENST00000467273 UTP4Q969X6 686 aaKnown RBP7.32□□□□□ -1.24
PTCD3-207ENST00000467273 HEG1Q9ULI3 1381 aa7.32□□□□□ -1.24
PTCD3-207ENST00000467273 TRAF5O00463 557 aa7.31□□□□□ -1.24
PTCD3-207ENST00000467273 EPS15P42566 896 aa7.31□□□□□ -1.24
PTCD3-207ENST00000467273 SERPINB4P48594 390 aa7.31□□□□□ -1.24
PTCD3-207ENST00000467273 CTU1Q7Z7A3 348 aaKnown RBP7.31□□□□□ -1.24
PTCD3-207ENST00000467273 RBSNQ9H1K0 784 aa7.31□□□□□ -1.24
PTCD3-207ENST00000467273 LGR6Q9HBX8 967 aa7.31□□□□□ -1.24
PTCD3-207ENST00000467273 TLR7Q9NYK1 1049 aaKnown RBP7.31□□□□□ -1.24
PTCD3-207ENST00000467273 GPRC5DQ9NZD1 345 aa7.31□□□□□ -1.24
PTCD3-207ENST00000467273 CXXC1Q9P0U4 656 aaPredicted RBP7.31□□□□□ -1.24
PTCD3-207ENST00000467273 USP20Q9Y2K6 914 aa7.31□□□□□ -1.24
PTCD3-207ENST00000467273 WNT11O96014 354 aa7.3□□□□□ -1.24
PTCD3-207ENST00000467273 PSAPP07602 524 aa7.3□□□□□ -1.24
PTCD3-207ENST00000467273 FMR1Q06787 632 aaKnown RBP eCLIP7.3□□□□□ -1.24
PTCD3-207ENST00000467273 CCDC27Q2M243 656 aa7.3□□□□□ -1.24
PTCD3-207ENST00000467273 HABP4Q5JVS0 413 aaKnown RBP7.3□□□□□ -1.24
PTCD3-207ENST00000467273 ZNF790Q6PG37 636 aa7.3□□□□□ -1.24
PTCD3-207ENST00000467273 ACAD11Q709F0 780 aa7.3□□□□□ -1.24
PTCD3-207ENST00000467273 CDC37L1Q7L3B6 337 aa7.3□□□□□ -1.24
PTCD3-207ENST00000467273 TRIM42Q8IWZ5 723 aa7.3□□□□□ -1.24
PTCD3-207ENST00000467273 ARMC10Q8N2F6 343 aa7.3□□□□□ -1.24
PTCD3-207ENST00000467273 CEP41Q9BYV8 373 aa7.3□□□□□ -1.24
PTCD3-207ENST00000467273 C7orf69Q9H7B7 122 aa7.3□□□□□ -1.24
PTCD3-207ENST00000467273 TRIM33Q9UPN9 1127 aa7.3□□□□□ -1.24
PTCD3-207ENST00000467273 AKAP11Q9UKA4 1901 aa7.3□□□□□ -1.24
PTCD3-207ENST00000467273 KIF7Q2M1P5 1343 aa7.29□□□□□ -1.24
PTCD3-207ENST00000467273 COL4A5P29400 1685 aa7.29□□□□□ -1.24
PTCD3-207ENST00000467273 RIC1Q4ADV7 1423 aa7.29□□□□□ -1.24
PTCD3-207ENST00000467273 SIPA1L3O60292 1781 aaPredicted RBP7.29□□□□□ -1.24
PTCD3-207ENST00000467273 HMX2A2RU54 273 aa7.29□□□□□ -1.24
PTCD3-207ENST00000467273 MICAL2O94851 1124 aa7.29□□□□□ -1.24
PTCD3-207ENST00000467273 WISP1O95388 367 aa7.29□□□□□ -1.24
PTCD3-207ENST00000467273 TNNT2P45379 298 aaPredicted RBP7.29□□□□□ -1.24
PTCD3-207ENST00000467273 CRY2Q49AN0 593 aa7.29□□□□□ -1.24
PTCD3-207ENST00000467273 NOM1Q5C9Z4 860 aaKnown RBP7.29□□□□□ -1.24
PTCD3-207ENST00000467273 DTX1Q86Y01 620 aa7.29□□□□□ -1.24
PTCD3-207ENST00000467273 NIM1KQ8IY84 436 aa7.29□□□□□ -1.24
PTCD3-207ENST00000467273 FOXD4L4Q8WXT5 416 aaPredicted RBP7.29□□□□□ -1.24
PTCD3-207ENST00000467273 DBNDD2Q9BQY9 259 aa7.29□□□□□ -1.24
PTCD3-207ENST00000467273 FAM155AB1AL88 458 aaPredicted RBP7.28□□□□□ -1.24
PTCD3-207ENST00000467273 XYLBO75191 536 aa7.28□□□□□ -1.24
PTCD3-207ENST00000467273 WEE1P30291 646 aa7.28□□□□□ -1.24
PTCD3-207ENST00000467273 HOXA10P31260 410 aaPredicted RBP7.28□□□□□ -1.24
PTCD3-207ENST00000467273 IL13P35225 146 aa7.28□□□□□ -1.24
PTCD3-207ENST00000467273 HUNKP57058 714 aa7.28□□□□□ -1.24
PTCD3-207ENST00000467273 RGMBQ6NW40 437 aa7.28□□□□□ -1.24
PTCD3-207ENST00000467273 ZNF496Q96IT1 587 aaPredicted RBP7.28□□□□□ -1.24
PTCD3-207ENST00000467273 GLIS2Q9BZE0 524 aaPredicted RBP7.28□□□□□ -1.24
PTCD3-207ENST00000467273 NYXQ9GZU5 481 aa7.28□□□□□ -1.24
PTCD3-207ENST00000467273 SOWAHDA6NJG2 315 aa7.27□□□□□ -1.25
PTCD3-207ENST00000467273 A1BGP04217 495 aa7.27□□□□□ -1.25
PTCD3-207ENST00000467273 TEFQ10587 303 aa7.27□□□□□ -1.25
PTCD3-207ENST00000467273 RNF43Q68DV7 783 aa7.27□□□□□ -1.25
PTCD3-207ENST00000467273 TXNDC11Q6PKC3 985 aa7.27□□□□□ -1.25
PTCD3-207ENST00000467273 OLFM4Q6UX06 510 aa7.27□□□□□ -1.25
PTCD3-207ENST00000467273 RGL4Q8IZJ4 473 aa7.27□□□□□ -1.25
PTCD3-207ENST00000467273 CMTR1Q8N1G2 835 aaKnown RBP7.27□□□□□ -1.25
PTCD3-207ENST00000467273 C2orf69Q8N8R5 385 aa7.27□□□□□ -1.25
PTCD3-207ENST00000467273 SUPT20HQ8NEM7 779 aa7.27□□□□□ -1.25
PTCD3-207ENST00000467273 MKNK1Q9BUB5 465 aa7.27□□□□□ -1.25
PTCD3-207ENST00000467273 C11orf16Q9NQ32 467 aa7.27□□□□□ -1.25
PTCD3-207ENST00000467273 RNF186Q9NXI6 227 aa7.27□□□□□ -1.25
PTCD3-207ENST00000467273 ADGRE2Q9UHX3 823 aa7.27□□□□□ -1.25
PTCD3-207ENST00000467273 ZNRF3Q9ULT6 936 aa7.27□□□□□ -1.25
PTCD3-207ENST00000467273 PPME1Q9Y570 386 aa7.27□□□□□ -1.25
PTCD3-207ENST00000467273 IBTKQ9P2D0 1353 aaPredicted RBP7.27□□□□□ -1.25
PTCD3-207ENST00000467273 NPC1L1Q9UHC9 1359 aa7.27□□□□□ -1.25
PTCD3-207ENST00000467273 MKI67P46013 3256 aaKnown RBP7.26□□□□□ -1.25
PTCD3-207ENST00000467273 PRR19A6NJB7 356 aa7.26□□□□□ -1.25
PTCD3-207ENST00000467273 LINC01387J3KSC0 135 aa7.26□□□□□ -1.25
PTCD3-207ENST00000467273 MMP20O60882 483 aa7.26□□□□□ -1.25
PTCD3-207ENST00000467273 TRPA1O75762 1119 aa7.26□□□□□ -1.25
PTCD3-207ENST00000467273 JAG1P78504 1218 aa7.26□□□□□ -1.25
PTCD3-207ENST00000467273 KIF23Q02241 960 aaPredicted RBP7.26□□□□□ -1.25
PTCD3-207ENST00000467273 FKBP5Q13451 457 aaPredicted RBP7.26□□□□□ -1.25
PTCD3-207ENST00000467273 TNIP1Q15025 636 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms