RNA–Protein interactions for RNA: ENST00000467049.1

PTPDC1-203, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

TSL 2

Gene PTPDC1, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-203ENST00000467049 TRIM43Q96BQ3 446 aaPredicted RBP10.81□□□□□ -0.68
PTPDC1-203ENST00000467049 ATP8A2Q9NTI2 1148 aa10.81□□□□□ -0.68
PTPDC1-203ENST00000467049 KIAA0355O15063 1070 aa10.81□□□□□ -0.68
PTPDC1-203ENST00000467049 RARBP10826 455 aa10.81□□□□□ -0.68
PTPDC1-203ENST00000467049 AKR1B1P15121 316 aa10.81□□□□□ -0.68
PTPDC1-203ENST00000467049 TLE2Q04725 743 aa10.81□□□□□ -0.68
PTPDC1-203ENST00000467049 TMEM132BQ14DG7 1078 aa10.81□□□□□ -0.68
PTPDC1-203ENST00000467049 SH3RF1Q7Z6J0 888 aa10.81□□□□□ -0.68
PTPDC1-203ENST00000467049 MMP19Q99542 508 aa10.81□□□□□ -0.68
PTPDC1-203ENST00000467049 XPNPEP3Q9NQH7 507 aa10.81□□□□□ -0.68
PTPDC1-203ENST00000467049 TACC3Q9Y6A5 838 aa10.81□□□□□ -0.68
PTPDC1-203ENST00000467049 MYH4Q9Y623 1939 aa10.8□□□□□ -0.68
PTPDC1-203ENST00000467049 GOLIM4O00461 696 aa10.8□□□□□ -0.68
PTPDC1-203ENST00000467049 CLTBP09497 229 aa10.8□□□□□ -0.68
PTPDC1-203ENST00000467049 ZNF792Q3KQV3 632 aa10.8□□□□□ -0.68
PTPDC1-203ENST00000467049 RNF180Q86T96 592 aa10.8□□□□□ -0.68
PTPDC1-203ENST00000467049 CLASRPQ8N2M8 674 aaKnown RBP10.8□□□□□ -0.68
PTPDC1-203ENST00000467049 FERMT2Q96AC1 680 aa10.8□□□□□ -0.68
PTPDC1-203ENST00000467049 KIF1BPQ96EK5 621 aa10.8□□□□□ -0.68
PTPDC1-203ENST00000467049 DYNLL2Q96FJ2 89 aa10.8□□□□□ -0.68
PTPDC1-203ENST00000467049 TSEN34Q9BSV6 310 aaKnown RBP10.8□□□□□ -0.68
PTPDC1-203ENST00000467049 TTYH1Q9H313 450 aaPredicted RBP10.8□□□□□ -0.68
PTPDC1-203ENST00000467049 IL1RAPL2Q9NP60 686 aa10.8□□□□□ -0.68
PTPDC1-203ENST00000467049 MCM3APO60318 1980 aa10.79□□□□□ -0.68
PTPDC1-203ENST00000467049 MYCNP04198 464 aaPredicted RBP10.79□□□□□ -0.68
PTPDC1-203ENST00000467049 ADD2P35612 726 aa10.79□□□□□ -0.68
PTPDC1-203ENST00000467049 KCTD2Q14681 263 aa10.79□□□□□ -0.68
PTPDC1-203ENST00000467049 C12orf60Q5U649 245 aa10.79□□□□□ -0.68
PTPDC1-203ENST00000467049 C16orf86Q6ZW13 317 aa10.79□□□□□ -0.68
PTPDC1-203ENST00000467049 CLEC10AQ8IUN9 316 aa10.79□□□□□ -0.68
PTPDC1-203ENST00000467049 AMOTL1Q8IY63 956 aa10.79□□□□□ -0.68
PTPDC1-203ENST00000467049 SPICE1Q8N0Z3 855 aa10.79□□□□□ -0.68
PTPDC1-203ENST00000467049 MYLIPQ8WY64 445 aa10.79□□□□□ -0.68
PTPDC1-203ENST00000467049 TINF2Q9BSI4 451 aa10.79□□□□□ -0.68
PTPDC1-203ENST00000467049 BCL11AQ9H165 835 aa10.79□□□□□ -0.68
PTPDC1-203ENST00000467049 ARMT1Q9H993 441 aa10.79□□□□□ -0.68
PTPDC1-203ENST00000467049 MBD4O95243 580 aa10.78□□□□□ -0.68
PTPDC1-203ENST00000467049 IFIT2P09913 472 aaKnown RBP10.78□□□□□ -0.68
PTPDC1-203ENST00000467049 ZNF865P0CJ78 1059 aaPredicted RBP10.78□□□□□ -0.68
PTPDC1-203ENST00000467049 AKR1A1P14550 325 aa10.78□□□□□ -0.68
PTPDC1-203ENST00000467049 CDK8P49336 464 aa10.78□□□□□ -0.68
PTPDC1-203ENST00000467049 MSL3Q8N5Y2 521 aaKnown RBP10.78□□□□□ -0.68
PTPDC1-203ENST00000467049 REPS2Q8NFH8 660 aa10.78□□□□□ -0.68
PTPDC1-203ENST00000467049 RNPC3Q96LT9 517 aaKnown RBP10.78□□□□□ -0.68
PTPDC1-203ENST00000467049 DNAJC2Q99543 621 aaKnown RBP10.78□□□□□ -0.68
PTPDC1-203ENST00000467049 KANSL2Q9H9L4 492 aa10.78□□□□□ -0.68
PTPDC1-203ENST00000467049 GOPCQ9HD26 462 aa10.78□□□□□ -0.68
PTPDC1-203ENST00000467049 PPP1R9AQ9ULJ8 1098 aa10.78□□□□□ -0.68
PTPDC1-203ENST00000467049 ZBED9Q6R2W3 1325 aa10.78□□□□□ -0.68
PTPDC1-203ENST00000467049 A0A1W2PQ45 241 aaPredicted RBP10.78□□□□□ -0.68
PTPDC1-203ENST00000467049 A0A1W2PQY0 241 aa10.78□□□□□ -0.68
PTPDC1-203ENST00000467049 PRKAB2O43741 272 aa10.78□□□□□ -0.68
PTPDC1-203ENST00000467049 EEF2P13639 858 aaKnown RBP10.78□□□□□ -0.68
PTPDC1-203ENST00000467049 FOSL2P15408 326 aa10.78□□□□□ -0.68
PTPDC1-203ENST00000467049 STAT3P40763 770 aa10.78□□□□□ -0.68
PTPDC1-203ENST00000467049 TOX2Q96NM4 488 aa10.78□□□□□ -0.68
PTPDC1-203ENST00000467049 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.78□□□□□ -0.68
PTPDC1-203ENST00000467049 PAG1Q9NWQ8 432 aa10.78□□□□□ -0.68
PTPDC1-203ENST00000467049 ZNF214Q9UL59 606 aaPredicted RBP10.78□□□□□ -0.68
PTPDC1-203ENST00000467049 VWA5AO00534 786 aa10.77□□□□□ -0.69
PTPDC1-203ENST00000467049 RAB11FIP3O75154 756 aa10.77□□□□□ -0.69
PTPDC1-203ENST00000467049 ADAMTS4O75173 837 aa10.77□□□□□ -0.69
PTPDC1-203ENST00000467049 PGK2P07205 417 aa10.77□□□□□ -0.69
PTPDC1-203ENST00000467049 RAG1P15918 1043 aa10.77□□□□□ -0.69
PTPDC1-203ENST00000467049 ITGB8P26012 769 aa10.77□□□□□ -0.69
PTPDC1-203ENST00000467049 EPHB4P54760 987 aa10.77□□□□□ -0.69
PTPDC1-203ENST00000467049 FPGSQ05932 587 aa10.77□□□□□ -0.69
PTPDC1-203ENST00000467049 UBE3CQ15386 1083 aa10.77□□□□□ -0.69
PTPDC1-203ENST00000467049 ANKRD33Q7Z3H0 272 aa10.77□□□□□ -0.69
PTPDC1-203ENST00000467049 RPAP2Q8IXW5 612 aaPredicted RBP10.77□□□□□ -0.69
PTPDC1-203ENST00000467049 SYMPKQ92797 1274 aaKnown RBP10.77□□□□□ -0.69
PTPDC1-203ENST00000467049 DDRGK1Q96HY6 314 aa10.77□□□□□ -0.69
PTPDC1-203ENST00000467049 FBXO28Q9NVF7 368 aa10.77□□□□□ -0.69
PTPDC1-203ENST00000467049 CNPY2Q9Y2B0 182 aa10.77□□□□□ -0.69
PTPDC1-203ENST00000467049 SYNGAP1Q96PV0 1343 aa10.77□□□□□ -0.69
PTPDC1-203ENST00000467049 MOXD2PA6NHM9 499 aa10.76□□□□□ -0.69
PTPDC1-203ENST00000467049 HMMRO75330 724 aa10.76□□□□□ -0.69
PTPDC1-203ENST00000467049 PGK1P00558 417 aa10.76□□□□□ -0.69
PTPDC1-203ENST00000467049 TAL1P17542 331 aaPredicted RBP10.76□□□□□ -0.69
PTPDC1-203ENST00000467049 ATP5JP18859 108 aa10.76□□□□□ -0.69
PTPDC1-203ENST00000467049 SAMD1Q6SPF0 538 aaPredicted RBP10.76□□□□□ -0.69
PTPDC1-203ENST00000467049 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.76□□□□□ -0.69
PTPDC1-203ENST00000467049 KLHDC9Q8NEP7 349 aa10.76□□□□□ -0.69
PTPDC1-203ENST00000467049 TMEM39AQ9NV64 488 aa10.76□□□□□ -0.69
PTPDC1-203ENST00000467049 CYP2D7A0A087X1C5 515 aa10.76□□□□□ -0.69
PTPDC1-203ENST00000467049 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.76□□□□□ -0.69
PTPDC1-203ENST00000467049 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.76□□□□□ -0.69
PTPDC1-203ENST00000467049 DCDC2CA8MYV0 355 aa10.76□□□□□ -0.69
PTPDC1-203ENST00000467049 USP17L12C9JPN9 530 aa10.76□□□□□ -0.69
PTPDC1-203ENST00000467049 USP17L21D6R901 530 aa10.76□□□□□ -0.69
PTPDC1-203ENST00000467049 PQBP1O60828 265 aaKnown RBP10.76□□□□□ -0.69
PTPDC1-203ENST00000467049 MS4A1P11836 297 aa10.76□□□□□ -0.69
PTPDC1-203ENST00000467049 ACLYP53396 1101 aa10.76□□□□□ -0.69
PTPDC1-203ENST00000467049 MAMDC4Q6UXC1 1216 aa10.76□□□□□ -0.69
PTPDC1-203ENST00000467049 ZNF467Q7Z7K2 595 aaPredicted RBP10.76□□□□□ -0.69
PTPDC1-203ENST00000467049 PANK1Q8TE04 598 aa10.76□□□□□ -0.69
PTPDC1-203ENST00000467049 NUP133Q8WUM0 1156 aa10.76□□□□□ -0.69
PTPDC1-203ENST00000467049 HAUS7Q99871 368 aa10.76□□□□□ -0.69
PTPDC1-203ENST00000467049 FAM184BQ9ULE4 1060 aa10.76□□□□□ -0.69
PTPDC1-203ENST00000467049 DNAJC25-GNG10A0A024R161 153 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms