RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 COL11A1P12107 1806 aaPredicted RBP11.19□□□□□ -0.62
SDCCAG3-208ENST00000466579 PLA2G6O60733 806 aa11.18□□□□□ -0.62
SDCCAG3-208ENST00000466579 TOP1P11387 765 aaKnown RBP11.18□□□□□ -0.62
SDCCAG3-208ENST00000466579 HOXD10P28358 340 aa11.18□□□□□ -0.62
SDCCAG3-208ENST00000466579 NECTIN1Q15223 517 aa11.18□□□□□ -0.62
SDCCAG3-208ENST00000466579 CCDC178Q5BJE1 867 aa11.18□□□□□ -0.62
SDCCAG3-208ENST00000466579 RRP12Q5JTH9 1297 aaKnown RBP11.18□□□□□ -0.62
SDCCAG3-208ENST00000466579 FAM83BQ5T0W9 1011 aa11.18□□□□□ -0.62
SDCCAG3-208ENST00000466579 SLFN13Q68D06 897 aa11.18□□□□□ -0.62
SDCCAG3-208ENST00000466579 DGKHQ86XP1 1220 aa11.18□□□□□ -0.62
SDCCAG3-208ENST00000466579 LRRC47Q8N1G4 583 aaKnown RBP11.18□□□□□ -0.62
SDCCAG3-208ENST00000466579 REPS2Q8NFH8 660 aa11.18□□□□□ -0.62
SDCCAG3-208ENST00000466579 ARMC5Q96C12 935 aa11.18□□□□□ -0.62
SDCCAG3-208ENST00000466579 TMEM47Q9BQJ4 181 aa11.18□□□□□ -0.62
SDCCAG3-208ENST00000466579 KRT23Q9C075 422 aa11.18□□□□□ -0.62
SDCCAG3-208ENST00000466579 TANGO6Q9C0B7 1094 aa11.18□□□□□ -0.62
SDCCAG3-208ENST00000466579 GJD2Q9UKL4 321 aa11.18□□□□□ -0.62
SDCCAG3-208ENST00000466579 HPS5Q9UPZ3 1129 aa11.18□□□□□ -0.62
SDCCAG3-208ENST00000466579 RBM8AQ9Y5S9 174 aaKnown RBP11.18□□□□□ -0.62
SDCCAG3-208ENST00000466579 CENPFP49454 3210 aa11.18□□□□□ -0.62
SDCCAG3-208ENST00000466579 ZNF236Q9UL36 1845 aa11.17□□□□□ -0.62
SDCCAG3-208ENST00000466579 B4E1Z4 1266 aa11.17□□□□□ -0.62
SDCCAG3-208ENST00000466579 KDM4AO75164 1064 aa11.17□□□□□ -0.62
SDCCAG3-208ENST00000466579 FLOT1O75955 427 aa11.17□□□□□ -0.62
SDCCAG3-208ENST00000466579 FMNL1O95466 1100 aaPredicted RBP11.17□□□□□ -0.62
SDCCAG3-208ENST00000466579 MAPK4P31152 587 aa11.17□□□□□ -0.62
SDCCAG3-208ENST00000466579 IRF5Q13568 498 aa11.17□□□□□ -0.62
SDCCAG3-208ENST00000466579 KIAA1211Q6ZU35 1233 aa11.17□□□□□ -0.62
SDCCAG3-208ENST00000466579 SHCBP1Q8NEM2 672 aa11.17□□□□□ -0.62
SDCCAG3-208ENST00000466579 NUP88Q99567 741 aaPredicted RBP11.17□□□□□ -0.62
SDCCAG3-208ENST00000466579 TOMM22Q9NS69 142 aa11.17□□□□□ -0.62
SDCCAG3-208ENST00000466579 FBXO28Q9NVF7 368 aa11.17□□□□□ -0.62
SDCCAG3-208ENST00000466579 ZSWIM5Q9P217 1185 aa11.17□□□□□ -0.62
SDCCAG3-208ENST00000466579 STX8Q9UNK0 236 aa11.17□□□□□ -0.62
SDCCAG3-208ENST00000466579 PTCH2Q9Y6C5 1203 aa11.17□□□□□ -0.62
SDCCAG3-208ENST00000466579 TAF6LQ9Y6J9 622 aa11.17□□□□□ -0.62
SDCCAG3-208ENST00000466579 E7EWF7 191 aa11.16□□□□□ -0.62
SDCCAG3-208ENST00000466579 VWA5AO00534 786 aa11.16□□□□□ -0.62
SDCCAG3-208ENST00000466579 TNPO2O14787 897 aaKnown RBP11.16□□□□□ -0.62
SDCCAG3-208ENST00000466579 ATP2A1O14983 1001 aa11.16□□□□□ -0.62
SDCCAG3-208ENST00000466579 PEX10O60683 326 aa11.16□□□□□ -0.62
SDCCAG3-208ENST00000466579 SNHG28P0DPA3 235 aa11.16□□□□□ -0.62
SDCCAG3-208ENST00000466579 BMP3P12645 472 aa11.16□□□□□ -0.62
SDCCAG3-208ENST00000466579 CCNA1P78396 465 aa11.16□□□□□ -0.62
SDCCAG3-208ENST00000466579 PRKCZQ05513 592 aa11.16□□□□□ -0.62
SDCCAG3-208ENST00000466579 SEC23AQ15436 765 aa11.16□□□□□ -0.62
SDCCAG3-208ENST00000466579 CASC1Q6TDU7 716 aa11.16□□□□□ -0.62
SDCCAG3-208ENST00000466579 STOX1Q6ZVD7 989 aa11.16□□□□□ -0.62
SDCCAG3-208ENST00000466579 IQCA1Q86XH1 822 aa11.16□□□□□ -0.62
SDCCAG3-208ENST00000466579 PRPF38AQ8NAV1 312 aaKnown RBP11.16□□□□□ -0.62
SDCCAG3-208ENST00000466579 DCAF4Q8WV16 495 aa11.16□□□□□ -0.62
SDCCAG3-208ENST00000466579 USP6NLQ92738 828 aa11.16□□□□□ -0.62
SDCCAG3-208ENST00000466579 COA7Q96BR5 231 aa11.16□□□□□ -0.62
SDCCAG3-208ENST00000466579 ATG4CQ96DT6 458 aa11.16□□□□□ -0.62
SDCCAG3-208ENST00000466579 SLF1Q9BQI6 1058 aa11.16□□□□□ -0.62
SDCCAG3-208ENST00000466579 PAGR1Q9BTK6 254 aa11.16□□□□□ -0.62
SDCCAG3-208ENST00000466579 SPATC1LQ9H0A9 340 aa11.16□□□□□ -0.62
SDCCAG3-208ENST00000466579 PORCNQ9H237 461 aa11.16□□□□□ -0.62
SDCCAG3-208ENST00000466579 FEM1BQ9UK73 627 aa11.16□□□□□ -0.62
SDCCAG3-208ENST00000466579 ZNF214Q9UL59 606 aaPredicted RBP11.16□□□□□ -0.62
SDCCAG3-208ENST00000466579 GABRQQ9UN88 632 aa11.16□□□□□ -0.62
SDCCAG3-208ENST00000466579 RBBP6Q7Z6E9 1792 aaKnown RBP11.16□□□□□ -0.62
SDCCAG3-208ENST00000466579 SLC27A2O14975 620 aa11.15□□□□□ -0.62
SDCCAG3-208ENST00000466579 EPB41L2O43491 1005 aaKnown RBP11.15□□□□□ -0.62
SDCCAG3-208ENST00000466579 FDX1P10109 184 aa11.15□□□□□ -0.62
SDCCAG3-208ENST00000466579 KCNA4P22459 653 aa11.15□□□□□ -0.62
SDCCAG3-208ENST00000466579 TMEM132BQ14DG7 1078 aa11.15□□□□□ -0.62
SDCCAG3-208ENST00000466579 TSGA10IPQ3SY00 556 aa11.15□□□□□ -0.62
SDCCAG3-208ENST00000466579 MORN1Q5T089 497 aa11.15□□□□□ -0.62
SDCCAG3-208ENST00000466579 IFFO2Q5TF58 517 aa11.15□□□□□ -0.62
SDCCAG3-208ENST00000466579 CREB3L3Q68CJ9 461 aa11.15□□□□□ -0.62
SDCCAG3-208ENST00000466579 BTNL9Q6UXG8 535 aa11.15□□□□□ -0.62
SDCCAG3-208ENST00000466579 CYB5R4Q7L1T6 521 aa11.15□□□□□ -0.62
SDCCAG3-208ENST00000466579 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.15□□□□□ -0.62
SDCCAG3-208ENST00000466579 MB21D2Q8IYB1 491 aaPredicted RBP11.15□□□□□ -0.62
SDCCAG3-208ENST00000466579 ENAHQ8N8S7 591 aaPredicted RBP11.15□□□□□ -0.62
SDCCAG3-208ENST00000466579 PXYLP1Q8TE99 480 aa11.15□□□□□ -0.62
SDCCAG3-208ENST00000466579 KCNB2Q92953 911 aa11.15□□□□□ -0.62
SDCCAG3-208ENST00000466579 ZSCAN10Q96SZ4 725 aaPredicted RBP11.15□□□□□ -0.62
SDCCAG3-208ENST00000466579 MTA3Q9BTC8 594 aa11.15□□□□□ -0.62
SDCCAG3-208ENST00000466579 MOV10L1Q9BXT6 1211 aaKnown RBP11.15□□□□□ -0.62
SDCCAG3-208ENST00000466579 SLC38A10Q9HBR0 1119 aa11.15□□□□□ -0.62
SDCCAG3-208ENST00000466579 ANO2Q9NQ90 1003 aa11.15□□□□□ -0.62
SDCCAG3-208ENST00000466579 TNKSO95271 1327 aa11.14□□□□□ -0.63
SDCCAG3-208ENST00000466579 SLC25A27O95847 323 aa11.14□□□□□ -0.63
SDCCAG3-208ENST00000466579 PDHBP11177 359 aa11.14□□□□□ -0.63
SDCCAG3-208ENST00000466579 XRCC5P13010 732 aaKnown RBP11.14□□□□□ -0.63
SDCCAG3-208ENST00000466579 MCCP23508 829 aa11.14□□□□□ -0.63
SDCCAG3-208ENST00000466579 SLC1A4P43007 532 aa11.14□□□□□ -0.63
SDCCAG3-208ENST00000466579 FLT3LGP49771 235 aa11.14□□□□□ -0.63
SDCCAG3-208ENST00000466579 OAZ1P54368 228 aa11.14□□□□□ -0.63
SDCCAG3-208ENST00000466579 TRDNQ13061 729 aa11.14□□□□□ -0.63
SDCCAG3-208ENST00000466579 GPR142Q7Z601 462 aa11.14□□□□□ -0.63
SDCCAG3-208ENST00000466579 PLEKHH3Q7Z736 793 aa11.14□□□□□ -0.63
SDCCAG3-208ENST00000466579 FAM160B2Q86V87 743 aa11.14□□□□□ -0.63
SDCCAG3-208ENST00000466579 RIOX2Q8IUF8 465 aa11.14□□□□□ -0.63
SDCCAG3-208ENST00000466579 NCOA7Q8NI08 942 aa11.14□□□□□ -0.63
SDCCAG3-208ENST00000466579 CHURC1Q8WUH1 139 aa11.14□□□□□ -0.63
SDCCAG3-208ENST00000466579 SOCS4Q8WXH5 440 aa11.14□□□□□ -0.63
SDCCAG3-208ENST00000466579 MROH8Q9H579 483 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms