RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 ERO1AQ96HE7 468 aa7.89□□□□□ -1.15
NCL-208ENST00000466274 ZNF496Q96IT1 587 aaPredicted RBP7.89□□□□□ -1.15
NCL-208ENST00000466274 FMNL2Q96PY5 1086 aa7.89□□□□□ -1.15
NCL-208ENST00000466274 CUL9Q8IWT3 2517 aa7.89□□□□□ -1.15
NCL-208ENST00000466274 COL11A2P13942 1736 aaPredicted RBP7.89□□□□□ -1.15
NCL-208ENST00000466274 SNED1Q8TER0 1413 aa7.88□□□□□ -1.15
NCL-208ENST00000466274 HEG1Q9ULI3 1381 aa7.88□□□□□ -1.15
NCL-208ENST00000466274 TCERG1O14776 1098 aaKnown RBP7.88□□□□□ -1.15
NCL-208ENST00000466274 KIAA2012Q0VF49 1180 aa7.88□□□□□ -1.15
NCL-208ENST00000466274 TCIRG1Q13488 830 aa7.88□□□□□ -1.15
NCL-208ENST00000466274 OCLNQ16625 522 aa7.88□□□□□ -1.15
NCL-208ENST00000466274 TBC1D10BQ4KMP7 808 aaPredicted RBP7.88□□□□□ -1.15
NCL-208ENST00000466274 ZNF790Q6PG37 636 aa7.88□□□□□ -1.15
NCL-208ENST00000466274 DLK2Q6UY11 383 aa7.88□□□□□ -1.15
NCL-208ENST00000466274 DPP8Q6V1X1 898 aaPredicted RBP7.88□□□□□ -1.15
NCL-208ENST00000466274 CAPN12Q6ZSI9 719 aa7.88□□□□□ -1.15
NCL-208ENST00000466274 AEBP1Q8IUX7 1158 aa7.88□□□□□ -1.15
NCL-208ENST00000466274 CDCA5Q96FF9 252 aa7.88□□□□□ -1.15
NCL-208ENST00000466274 MEGF10Q96KG7 1140 aa7.88□□□□□ -1.15
NCL-208ENST00000466274 RTFDC1Q9BY42 306 aaPredicted RBP7.88□□□□□ -1.15
NCL-208ENST00000466274 ZMIZ1Q9ULJ6 1067 aa7.88□□□□□ -1.15
NCL-208ENST00000466274 PTPN22Q9Y2R2 807 aa7.88□□□□□ -1.15
NCL-208ENST00000466274 PRAMEF22A3QJZ6 481 aa7.87□□□□□ -1.15
NCL-208ENST00000466274 ALX3O95076 343 aa7.87□□□□□ -1.15
NCL-208ENST00000466274 INHBEP58166 350 aa7.87□□□□□ -1.15
NCL-208ENST00000466274 TEFQ10587 303 aa7.87□□□□□ -1.15
NCL-208ENST00000466274 TRIP4Q15650 581 aaPredicted RBP7.87□□□□□ -1.15
NCL-208ENST00000466274 IL22RA1Q8N6P7 574 aa7.87□□□□□ -1.15
NCL-208ENST00000466274 SIN3AQ96ST3 1273 aa7.87□□□□□ -1.15
NCL-208ENST00000466274 STXBP5LQ9Y2K9 1186 aa7.87□□□□□ -1.15
NCL-208ENST00000466274 ATP6V0A2Q9Y487 856 aa7.87□□□□□ -1.15
NCL-208ENST00000466274 NR2E3Q9Y5X4 410 aa7.87□□□□□ -1.15
NCL-208ENST00000466274 ANKRD31Q8N7Z5 1873 aa7.87□□□□□ -1.15
NCL-208ENST00000466274 BCORQ6W2J9 1755 aa7.87□□□□□ -1.15
NCL-208ENST00000466274 HYAL3O43820 417 aaPredicted RBP7.86□□□□□ -1.15
NCL-208ENST00000466274 GHRHP01286 108 aa7.86□□□□□ -1.15
NCL-208ENST00000466274 SWI5Q1ZZU3 235 aa7.86□□□□□ -1.15
NCL-208ENST00000466274 KIF4BQ2VIQ3 1234 aa7.86□□□□□ -1.15
NCL-208ENST00000466274 C16orf46Q6P387 395 aa7.86□□□□□ -1.15
NCL-208ENST00000466274 STK32AQ8WU08 396 aa7.86□□□□□ -1.15
NCL-208ENST00000466274 HTATIP2Q9BUP3 242 aa7.86□□□□□ -1.15
NCL-208ENST00000466274 GGA3Q9NZ52 723 aa7.86□□□□□ -1.15
NCL-208ENST00000466274 COL4A5P29400 1685 aa7.86□□□□□ -1.15
NCL-208ENST00000466274 BBOX1O75936 387 aa7.85□□□□□ -1.15
NCL-208ENST00000466274 BRD2P25440 801 aaKnown RBP7.85□□□□□ -1.15
NCL-208ENST00000466274 NF2P35240 595 aa7.85□□□□□ -1.15
NCL-208ENST00000466274 LRP8Q14114 963 aa7.85□□□□□ -1.15
NCL-208ENST00000466274 NAA30Q147X3 362 aaPredicted RBP7.85□□□□□ -1.15
NCL-208ENST00000466274 SLC9C1Q4G0N8 1177 aa7.85□□□□□ -1.15
NCL-208ENST00000466274 OTUD7BQ6GQQ9 843 aa7.85□□□□□ -1.15
NCL-208ENST00000466274 ZNF333Q96JL9 665 aa7.85□□□□□ -1.15
NCL-208ENST00000466274 MKNK1Q9BUB5 465 aa7.85□□□□□ -1.15
NCL-208ENST00000466274 TRIM33Q9UPN9 1127 aa7.85□□□□□ -1.15
NCL-208ENST00000466274 ANKRD26Q9UPS8 1709 aa7.85□□□□□ -1.15
NCL-208ENST00000466274 MRC1P22897 1456 aa7.85□□□□□ -1.15
NCL-208ENST00000466274 MKI67P46013 3256 aaKnown RBP7.85□□□□□ -1.15
NCL-208ENST00000466274 ARFGEF2Q9Y6D5 1785 aa7.84□□□□□ -1.15
NCL-208ENST00000466274 SZT2Q5T011 3432 aa7.84□□□□□ -1.15
NCL-208ENST00000466274 SHTN1A0MZ66 631 aa7.84□□□□□ -1.15
NCL-208ENST00000466274 UBE2Q2LH0YL09 131 aa7.84□□□□□ -1.15
NCL-208ENST00000466274 TNFRSF10BO14763 440 aa7.84□□□□□ -1.15
NCL-208ENST00000466274 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.84□□□□□ -1.158e-41■■□□□ 14.2
NCL-208ENST00000466274 SP8Q8IXZ3 490 aa7.84□□□□□ -1.15
NCL-208ENST00000466274 DEFB123Q8N688 67 aa7.84□□□□□ -1.15
NCL-208ENST00000466274 AKTIPQ9H8T0 292 aa7.84□□□□□ -1.15
NCL-208ENST00000466274 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.83□□□□□ -1.16
NCL-208ENST00000466274 MANSC4A6NHS7 340 aaPredicted RBP7.83□□□□□ -1.16
NCL-208ENST00000466274 PSMD14O00487 310 aa7.83□□□□□ -1.16
NCL-208ENST00000466274 SOX18P35713 384 aa7.83□□□□□ -1.16
NCL-208ENST00000466274 ELOAQ14241 798 aaKnown RBP7.83□□□□□ -1.16
NCL-208ENST00000466274 SETDB1Q15047 1291 aa7.83□□□□□ -1.16
NCL-208ENST00000466274 ARMC9Q7Z3E5 817 aa7.83□□□□□ -1.16
NCL-208ENST00000466274 KRTAP9-2Q9BYQ4 174 aa7.83□□□□□ -1.16
NCL-208ENST00000466274 RBSNQ9H1K0 784 aa7.83□□□□□ -1.16
NCL-208ENST00000466274 PRO3102Q9H379 93 aa7.83□□□□□ -1.16
NCL-208ENST00000466274 SCN7AQ01118 1682 aa7.83□□□□□ -1.16
NCL-208ENST00000466274 TRIOBPQ9H2D6 2365 aa7.82□□□□□ -1.16
NCL-208ENST00000466274 YDJCA8MPS7 323 aa7.82□□□□□ -1.16
NCL-208ENST00000466274 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.82□□□□□ -1.16
NCL-208ENST00000466274 F8W735 103 aaPredicted RBP7.82□□□□□ -1.16
NCL-208ENST00000466274 SNRPA1P09661 255 aaKnown RBP7.82□□□□□ -1.16
NCL-208ENST00000466274 HOXD8P13378 290 aaPredicted RBP7.82□□□□□ -1.16
NCL-208ENST00000466274 MTHFSDQ2M296 383 aaKnown RBP7.82□□□□□ -1.16
NCL-208ENST00000466274 RIC1Q4ADV7 1423 aa7.82□□□□□ -1.16
NCL-208ENST00000466274 ANGEL2Q5VTE6 544 aaKnown RBP7.82□□□□□ -1.16
NCL-208ENST00000466274 PRR23CQ6ZRP0 262 aa7.82□□□□□ -1.16
NCL-208ENST00000466274 TMC4Q7Z404 712 aa7.82□□□□□ -1.16
NCL-208ENST00000466274 PPP1R42Q7Z4L9 355 aa7.82□□□□□ -1.16
NCL-208ENST00000466274 DZIP1LQ8IYY4 767 aaKnown RBP7.82□□□□□ -1.16
NCL-208ENST00000466274 CD99L2Q8TCZ2 262 aa7.82□□□□□ -1.16
NCL-208ENST00000466274 PIK3R5Q8WYR1 880 aa7.82□□□□□ -1.16
NCL-208ENST00000466274 MRPL18Q9H0U6 180 aaKnown RBP7.82□□□□□ -1.16
NCL-208ENST00000466274 R3HDMLQ9H3Y0 253 aa7.82□□□□□ -1.16
NCL-208ENST00000466274 BTBD11A6QL63 1104 aa7.81□□□□□ -1.16
NCL-208ENST00000466274 ERVV-1B6SEH8 477 aa7.81□□□□□ -1.16
NCL-208ENST00000466274 IL13P35225 146 aa7.81□□□□□ -1.16
NCL-208ENST00000466274 SP3Q02447 781 aa7.81□□□□□ -1.16
NCL-208ENST00000466274 TMEM130Q8N3G9 435 aa7.81□□□□□ -1.16
NCL-208ENST00000466274 COL26A1Q96A83 441 aa7.81□□□□□ -1.16
NCL-208ENST00000466274 EYA3Q99504 573 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms