RNA–Protein interactions for RNA: ENST00000466272.1

SMTN-214, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-214ENST00000466272 ATG4CQ96DT6 458 aa12.91□□□□□ -0.34
SMTN-214ENST00000466272 JAKMIP1Q96N16 626 aaKnown RBP12.91□□□□□ -0.34
SMTN-214ENST00000466272 PAGR1Q9BTK6 254 aa12.91□□□□□ -0.34
SMTN-214ENST00000466272 ARHGAP39Q9C0H5 1083 aa12.91□□□□□ -0.34
SMTN-214ENST00000466272 TXNRD2Q9NNW7 524 aa12.91□□□□□ -0.34
SMTN-214ENST00000466272 FRMPD2Q68DX3 1309 aaPredicted RBP12.9□□□□□ -0.34
SMTN-214ENST00000466272 SH2B2O14492 632 aaPredicted RBP12.9□□□□□ -0.34
SMTN-214ENST00000466272 IFIT3O14879 490 aaKnown RBP12.9□□□□□ -0.34
SMTN-214ENST00000466272 FLOT1O75955 427 aa12.9□□□□□ -0.34
SMTN-214ENST00000466272 MCCP23508 829 aa12.9□□□□□ -0.34
SMTN-214ENST00000466272 CTGFP29279 349 aa12.9□□□□□ -0.34
SMTN-214ENST00000466272 CCDC96Q2M329 555 aa12.9□□□□□ -0.34
SMTN-214ENST00000466272 PPP4R3BQ5MIZ7 849 aa12.9□□□□□ -0.34
SMTN-214ENST00000466272 PNMA1Q8ND90 353 aa12.9□□□□□ -0.34
SMTN-214ENST00000466272 NEK1Q96PY6 1258 aa12.9□□□□□ -0.34
SMTN-214ENST00000466272 PLXNB2O15031 1838 aa12.9□□□□□ -0.34
SMTN-214ENST00000466272 FKTNO75072 461 aa12.89□□□□□ -0.35
SMTN-214ENST00000466272 PDHBP11177 359 aa12.89□□□□□ -0.35
SMTN-214ENST00000466272 BMP3P12645 472 aa12.89□□□□□ -0.35
SMTN-214ENST00000466272 ZKSCAN1P17029 563 aaPredicted RBP12.89□□□□□ -0.35
SMTN-214ENST00000466272 NT5C2P49902 561 aa12.89□□□□□ -0.35
SMTN-214ENST00000466272 TSGA10IPQ3SY00 556 aa12.89□□□□□ -0.35
SMTN-214ENST00000466272 TMEM67Q5HYA8 995 aa12.89□□□□□ -0.35
SMTN-214ENST00000466272 IFIT1BQ5T764 474 aaKnown RBP12.89□□□□□ -0.35
SMTN-214ENST00000466272 DGKHQ86XP1 1220 aa12.89□□□□□ -0.35
SMTN-214ENST00000466272 RAB11FIP4Q86YS3 637 aa12.89□□□□□ -0.35
SMTN-214ENST00000466272 GMCL1Q96IK5 515 aa12.89□□□□□ -0.35
SMTN-214ENST00000466272 CPVLQ9H3G5 476 aa12.89□□□□□ -0.35
SMTN-214ENST00000466272 KAT14Q9H8E8 782 aa12.89□□□□□ -0.35
SMTN-214ENST00000466272 LY9Q9HBG7 655 aa12.89□□□□□ -0.35
SMTN-214ENST00000466272 BTBD7Q9P203 1132 aa12.89□□□□□ -0.35
SMTN-214ENST00000466272 SYNPO2Q9UMS6 1093 aa12.89□□□□□ -0.35
SMTN-214ENST00000466272 TMEM232C9JQI7 657 aa12.88□□□□□ -0.35
SMTN-214ENST00000466272 GOLGA8HP0CJ92 632 aa12.88□□□□□ -0.35
SMTN-214ENST00000466272 TAL1P17542 331 aaPredicted RBP12.88□□□□□ -0.35
SMTN-214ENST00000466272 DSG3P32926 999 aa12.88□□□□□ -0.35
SMTN-214ENST00000466272 MCM5P33992 734 aa12.88□□□□□ -0.35
SMTN-214ENST00000466272 SLC1A4P43007 532 aa12.88□□□□□ -0.35
SMTN-214ENST00000466272 SP3Q02447 781 aa12.88□□□□□ -0.35
SMTN-214ENST00000466272 KRT32Q14532 448 aa12.88□□□□□ -0.35
SMTN-214ENST00000466272 WTAPQ15007 396 aa12.88□□□□□ -0.35
SMTN-214ENST00000466272 FAM110CQ1W6H9 321 aa12.88□□□□□ -0.35
SMTN-214ENST00000466272 TTBK2Q6IQ55 1244 aa12.88□□□□□ -0.35
SMTN-214ENST00000466272 IGDCC4Q8TDY8 1250 aa12.88□□□□□ -0.35
SMTN-214ENST00000466272 DCAF4Q8WV16 495 aa12.88□□□□□ -0.35
SMTN-214ENST00000466272 ANKS1AQ92625 1134 aa12.88□□□□□ -0.35
SMTN-214ENST00000466272 TTC14Q96N46 770 aa12.88□□□□□ -0.35
SMTN-214ENST00000466272 SLF1Q9BQI6 1058 aa12.88□□□□□ -0.35
SMTN-214ENST00000466272 MYL10Q9BUA6 226 aa12.88□□□□□ -0.35
SMTN-214ENST00000466272 GPCPD1Q9NPB8 672 aa12.88□□□□□ -0.35
SMTN-214ENST00000466272 RBPJLQ9UBG7 517 aa12.88□□□□□ -0.35
SMTN-214ENST00000466272 PPP1R9AQ9ULJ8 1098 aa12.88□□□□□ -0.35
SMTN-214ENST00000466272 EPB41L2O43491 1005 aaKnown RBP12.87□□□□□ -0.35
SMTN-214ENST00000466272 SNHG28P0DPA3 235 aa12.87□□□□□ -0.35
SMTN-214ENST00000466272 CASTP20810 708 aaKnown RBP12.87□□□□□ -0.35
SMTN-214ENST00000466272 SLC16A2P36021 539 aa12.87□□□□□ -0.35
SMTN-214ENST00000466272 SNAP25P60880 206 aa12.87□□□□□ -0.35
SMTN-214ENST00000466272 EXOSC10Q01780 885 aaKnown RBP12.87□□□□□ -0.35
SMTN-214ENST00000466272 ZNF543Q08ER8 600 aa12.87□□□□□ -0.35
SMTN-214ENST00000466272 COG2Q14746 738 aa12.87□□□□□ -0.35
SMTN-214ENST00000466272 SART3Q15020 963 aaKnown RBP12.87□□□□□ -0.35
SMTN-214ENST00000466272 Q3C1V9 767 aa12.87□□□□□ -0.35
SMTN-214ENST00000466272 CCDC178Q5BJE1 867 aa12.87□□□□□ -0.35
SMTN-214ENST00000466272 NOM1Q5C9Z4 860 aaKnown RBP12.87□□□□□ -0.35
SMTN-214ENST00000466272 REPS2Q8NFH8 660 aa12.87□□□□□ -0.35
SMTN-214ENST00000466272 KIFC2Q96AC6 838 aa12.87□□□□□ -0.35
SMTN-214ENST00000466272 UPF3BQ9BZI7 483 aaKnown RBP12.87□□□□□ -0.35
SMTN-214ENST00000466272 MORF4L1Q9UBU8 362 aa12.87□□□□□ -0.35
SMTN-214ENST00000466272 DOCK3Q8IZD9 2030 aa12.87□□□□□ -0.35
SMTN-214ENST00000466272 CENPFP49454 3210 aa12.87□□□□□ -0.35
SMTN-214ENST00000466272 MYPNQ86TC9 1320 aa12.87□□□□□ -0.35
SMTN-214ENST00000466272 MYH6P13533 1939 aa12.86□□□□□ -0.35
SMTN-214ENST00000466272 ERICH2A1L162 156 aa12.86□□□□□ -0.35
SMTN-214ENST00000466272 RXRAP19793 462 aa12.86□□□□□ -0.35
SMTN-214ENST00000466272 GCLCP48506 637 aaPredicted RBP12.86□□□□□ -0.35
SMTN-214ENST00000466272 ERVK-9P63128 1117 aa12.86□□□□□ -0.35
SMTN-214ENST00000466272 ERVK-24P63145 666 aa12.86□□□□□ -0.35
SMTN-214ENST00000466272 LACTBP83111 547 aaPredicted RBP12.86□□□□□ -0.35
SMTN-214ENST00000466272 IKQ13123 557 aaPredicted RBP12.86□□□□□ -0.35
SMTN-214ENST00000466272 LBX2Q6XYB7 198 aa12.86□□□□□ -0.35
SMTN-214ENST00000466272 TRIM47Q96LD4 638 aa12.86□□□□□ -0.35
SMTN-214ENST00000466272 PORCNQ9H237 461 aa12.86□□□□□ -0.35
SMTN-214ENST00000466272 PRDM10Q9NQV6 1147 aa12.86□□□□□ -0.35
SMTN-214ENST00000466272 RBBP6Q7Z6E9 1792 aaKnown RBP12.86□□□□□ -0.35
SMTN-214ENST00000466272 SMCHD1A6NHR9 2005 aa12.85□□□□□ -0.35
SMTN-214ENST00000466272 VWA5AO00534 786 aa12.85□□□□□ -0.35
SMTN-214ENST00000466272 RPS6KB1P23443 525 aa12.85□□□□□ -0.35
SMTN-214ENST00000466272 STAT2P52630 851 aa12.85□□□□□ -0.35
SMTN-214ENST00000466272 TMEM132BQ14DG7 1078 aa12.85□□□□□ -0.35
SMTN-214ENST00000466272 SLC35G1Q2M3R5 365 aa12.85□□□□□ -0.35
SMTN-214ENST00000466272 SYDE2Q5VT97 1194 aa12.85□□□□□ -0.35
SMTN-214ENST00000466272 BLOC1S2Q6QNY1 142 aa12.85□□□□□ -0.35
SMTN-214ENST00000466272 DHX32Q7L7V1 743 aaKnown RBP12.85□□□□□ -0.35
SMTN-214ENST00000466272 ZNF654Q8IZM8 581 aa12.85□□□□□ -0.35
SMTN-214ENST00000466272 STAG2Q8N3U4 1231 aa12.85□□□□□ -0.35
SMTN-214ENST00000466272 GTF3C2Q8WUA4 911 aaPredicted RBP12.85□□□□□ -0.35
SMTN-214ENST00000466272 NUP133Q8WUM0 1156 aa12.85□□□□□ -0.35
SMTN-214ENST00000466272 ERO1AQ96HE7 468 aa12.85□□□□□ -0.35
SMTN-214ENST00000466272 TMEM87BQ96K49 555 aa12.85□□□□□ -0.35
SMTN-214ENST00000466272 FEM1BQ9UK73 627 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms