RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 SPATA1Q5VX52 437 aa18.53■□□□□ 0.56
SLX4-202ENST00000466154 TYW1BQ6NUM6 668 aa18.53■□□□□ 0.56
SLX4-202ENST00000466154 ZNF397Q8NF99 534 aaPredicted RBP18.53■□□□□ 0.56
SLX4-202ENST00000466154 ATRIPQ8WXE1 791 aa18.53■□□□□ 0.56
SLX4-202ENST00000466154 XDHP47989 1333 aa18.52■□□□□ 0.56
SLX4-202ENST00000466154 AKR1B15C9JRZ8 316 aaPredicted RBP18.52■□□□□ 0.56
SLX4-202ENST00000466154 RAD21O60216 631 aa18.52■□□□□ 0.56
SLX4-202ENST00000466154 TXLNAP40222 546 aa18.52■□□□□ 0.56
SLX4-202ENST00000466154 ATP2C1P98194 919 aaPredicted RBP18.52■□□□□ 0.56
SLX4-202ENST00000466154 PHLPP1O60346 1717 aa18.51■□□□□ 0.55
SLX4-202ENST00000466154 ARAP2Q8WZ64 1704 aa18.51■□□□□ 0.55
SLX4-202ENST00000466154 FANCGO15287 622 aa18.51■□□□□ 0.55
SLX4-202ENST00000466154 BAG3O95817 575 aa18.51■□□□□ 0.55
SLX4-202ENST00000466154 BMP15O95972 392 aa18.51■□□□□ 0.55
SLX4-202ENST00000466154 CASP14P31944 242 aa18.51■□□□□ 0.55
SLX4-202ENST00000466154 PICALMQ13492 652 aa18.51■□□□□ 0.55
SLX4-202ENST00000466154 DUOX1Q9NRD9 1551 aa18.51■□□□□ 0.55
SLX4-202ENST00000466154 MYH6P13533 1939 aa18.51■□□□□ 0.55
SLX4-202ENST00000466154 TEX35Q5T0J7 233 aa18.51■□□□□ 0.55
SLX4-202ENST00000466154 C12orf60Q5U649 245 aa18.51■□□□□ 0.55
SLX4-202ENST00000466154 TMEM139Q8IV31 216 aa18.51■□□□□ 0.55
SLX4-202ENST00000466154 CCDC12Q8WUD4 166 aaPredicted RBP18.51■□□□□ 0.55
SLX4-202ENST00000466154 TNFRSF25Q93038 417 aa18.51■□□□□ 0.55
SLX4-202ENST00000466154 UBAP1LF5GYI3 381 aa18.51■□□□□ 0.55
SLX4-202ENST00000466154 ERCC5P28715 1186 aaPredicted RBP18.51■□□□□ 0.55
SLX4-202ENST00000466154 TM4SF1P30408 202 aa18.51■□□□□ 0.55
SLX4-202ENST00000466154 LETM2Q2VYF4 491 aa18.51■□□□□ 0.55
SLX4-202ENST00000466154 TRIM65Q6PJ69 517 aa18.51■□□□□ 0.55
SLX4-202ENST00000466154 USP17L2Q6R6M4 530 aa18.51■□□□□ 0.55
SLX4-202ENST00000466154 TIAM2Q8IVF5 1701 aa18.51■□□□□ 0.55
SLX4-202ENST00000466154 CNTNAP4Q9C0A0 1308 aa18.5■□□□□ 0.55
SLX4-202ENST00000466154 TRIM49BA6NDI0 452 aa18.5■□□□□ 0.55
SLX4-202ENST00000466154 C6orf229H3BNL8 230 aa18.5■□□□□ 0.55
SLX4-202ENST00000466154 NR1I3Q14994 352 aa18.5■□□□□ 0.55
SLX4-202ENST00000466154 GSDMAQ96QA5 445 aa18.5■□□□□ 0.55
SLX4-202ENST00000466154 UIMC1Q96RL1 719 aa18.5■□□□□ 0.55
SLX4-202ENST00000466154 NUP88Q99567 741 aaPredicted RBP18.5■□□□□ 0.55
SLX4-202ENST00000466154 USP21Q9UK80 565 aa18.5■□□□□ 0.55
SLX4-202ENST00000466154 CACNA1SQ13698 1873 aa18.5■□□□□ 0.55
SLX4-202ENST00000466154 PLCH1Q4KWH8 1693 aa18.5■□□□□ 0.55
SLX4-202ENST00000466154 PPP1R3GB7ZBB8 358 aa18.5■□□□□ 0.55
SLX4-202ENST00000466154 RIMBP2O15034 1052 aa18.5■□□□□ 0.55
SLX4-202ENST00000466154 PCP11498 1178 aaKnown RBP18.5■□□□□ 0.55
SLX4-202ENST00000466154 UBA7P41226 1012 aa18.5■□□□□ 0.55
SLX4-202ENST00000466154 BTDP43251 543 aa18.5■□□□□ 0.55
SLX4-202ENST00000466154 NELFBQ8WX92 580 aa18.5■□□□□ 0.55
SLX4-202ENST00000466154 UBA5Q9GZZ9 404 aa18.5■□□□□ 0.55
SLX4-202ENST00000466154 TMEM60Q9H2L4 133 aa18.5■□□□□ 0.55
SLX4-202ENST00000466154 NAPAP54920 295 aa18.49■□□□□ 0.55
SLX4-202ENST00000466154 WWC2Q6AWC2 1192 aa18.49■□□□□ 0.55
SLX4-202ENST00000466154 DTHD1Q6ZMT9 781 aa18.49■□□□□ 0.55
SLX4-202ENST00000466154 TEX11Q8IYF3 940 aa18.49■□□□□ 0.55
SLX4-202ENST00000466154 WDR66Q8TBY9 1149 aa18.49■□□□□ 0.55
SLX4-202ENST00000466154 MTRQ99707 1265 aa18.49■□□□□ 0.55
SLX4-202ENST00000466154 CALML3P27482 149 aa18.49■□□□□ 0.55
SLX4-202ENST00000466154 SYCP1Q15431 976 aa18.49■□□□□ 0.55
SLX4-202ENST00000466154 ZNF804AQ7Z570 1209 aa18.49■□□□□ 0.55
SLX4-202ENST00000466154 SMAP1Q8IYB5 467 aaPredicted RBP18.49■□□□□ 0.55
SLX4-202ENST00000466154 OGFRQ9NZT2 677 aa18.49■□□□□ 0.55
SLX4-202ENST00000466154 STX10O60499 249 aa18.49■□□□□ 0.55
SLX4-202ENST00000466154 TOM1O60784 492 aa18.49■□□□□ 0.55
SLX4-202ENST00000466154 FGRP09769 529 aa18.49■□□□□ 0.55
SLX4-202ENST00000466154 TMEM47Q9BQJ4 181 aa18.49■□□□□ 0.55
SLX4-202ENST00000466154 MRPL44Q9H9J2 332 aaKnown RBP18.49■□□□□ 0.55
SLX4-202ENST00000466154 ST7Q9NRC1 585 aa18.49■□□□□ 0.55
SLX4-202ENST00000466154 BCORQ6W2J9 1755 aa18.48■□□□□ 0.55
SLX4-202ENST00000466154 KLRF2D3W0D1 207 aa18.48■□□□□ 0.55
SLX4-202ENST00000466154 ATP2B2Q01814 1243 aa18.48■□□□□ 0.55
SLX4-202ENST00000466154 TBX2Q13207 712 aaPredicted RBP18.48■□□□□ 0.55
SLX4-202ENST00000466154 PCDHA4Q9UN74 947 aa18.48■□□□□ 0.55
SLX4-202ENST00000466154 A0A1B0GTH6 734 aa18.48■□□□□ 0.55
SLX4-202ENST00000466154 RPN1P04843 607 aaKnown RBP18.48■□□□□ 0.55
SLX4-202ENST00000466154 TPM1P09493 284 aa18.48■□□□□ 0.55
SLX4-202ENST00000466154 GPSM2P81274 684 aa18.48■□□□□ 0.55
SLX4-202ENST00000466154 PAK1Q13153 545 aa18.48■□□□□ 0.55
SLX4-202ENST00000466154 GRAPQ13588 217 aa18.48■□□□□ 0.55
SLX4-202ENST00000466154 GPIHBP1Q8IV16 184 aa18.48■□□□□ 0.55
SLX4-202ENST00000466154 SPATA20Q8TB22 786 aa18.48■□□□□ 0.55
SLX4-202ENST00000466154 GRAPLQ8TC17 118 aaPredicted RBP18.48■□□□□ 0.55
SLX4-202ENST00000466154 CYTH3O43739 400 aa18.47■□□□□ 0.55
SLX4-202ENST00000466154 CCNT1O60563 726 aaKnown RBP18.47■□□□□ 0.55
SLX4-202ENST00000466154 KRT31Q15323 416 aa18.47■□□□□ 0.55
SLX4-202ENST00000466154 EYA3Q99504 573 aa18.47■□□□□ 0.55
SLX4-202ENST00000466154 MAD2L2Q9UI95 211 aa18.47■□□□□ 0.55
SLX4-202ENST00000466154 FRMPD2Q68DX3 1309 aaPredicted RBP18.47■□□□□ 0.55
SLX4-202ENST00000466154 MYO1BO43795 1136 aa18.47■□□□□ 0.55
SLX4-202ENST00000466154 ERCC3P19447 782 aa18.47■□□□□ 0.55
SLX4-202ENST00000466154 CLEC10AQ8IUN9 316 aa18.47■□□□□ 0.55
SLX4-202ENST00000466154 FEZ1Q99689 392 aa18.47■□□□□ 0.55
SLX4-202ENST00000466154 L2HGDHQ9H9P8 463 aa18.47■□□□□ 0.55
SLX4-202ENST00000466154 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.47■□□□□ 0.55
SLX4-202ENST00000466154 ZSCAN20P17040 1043 aaPredicted RBP18.47■□□□□ 0.55
SLX4-202ENST00000466154 FXR1P51114 621 aaKnown RBP eCLIP18.47■□□□□ 0.55
SLX4-202ENST00000466154 SBK1Q52WX2 424 aa18.47■□□□□ 0.55
SLX4-202ENST00000466154 MFSD14BQ5SR56 506 aa18.47■□□□□ 0.55
SLX4-202ENST00000466154 MEX3CQ5U5Q3 659 aaKnown RBP18.47■□□□□ 0.55
SLX4-202ENST00000466154 JAKMIP3Q5VZ66 844 aa18.47■□□□□ 0.55
SLX4-202ENST00000466154 RAD9BQ6WBX8 426 aa18.47■□□□□ 0.55
SLX4-202ENST00000466154 SH3RF1Q7Z6J0 888 aa18.47■□□□□ 0.55
SLX4-202ENST00000466154 ACRBPQ8NEB7 543 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms