RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 SV2BQ7L1I2 683 aa7.24□□□□□ -1.25
LRCH3-211ENST00000466054 ANKRD24Q8TF21 1146 aa7.24□□□□□ -1.25
LRCH3-211ENST00000466054 FAM8A1Q9UBU6 413 aa7.24□□□□□ -1.25
LRCH3-211ENST00000466054 ZMYM5Q9UJ78 669 aa7.24□□□□□ -1.25
LRCH3-211ENST00000466054 TNNI2P48788 182 aa7.23□□□□□ -1.25
LRCH3-211ENST00000466054 EFEMP1Q12805 493 aa7.23□□□□□ -1.25
LRCH3-211ENST00000466054 SEPT6Q14141 434 aa7.23□□□□□ -1.25
LRCH3-211ENST00000466054 MRPL58Q14197 206 aaKnown RBP7.23□□□□□ -1.25
LRCH3-211ENST00000466054 DIEXFQ68CQ4 756 aaKnown RBP7.23□□□□□ -1.25
LRCH3-211ENST00000466054 FRMD5Q7Z6J6 570 aa7.23□□□□□ -1.25
LRCH3-211ENST00000466054 SHISA4Q96DD7 197 aa7.23□□□□□ -1.25
LRCH3-211ENST00000466054 OSBPL7Q9BZF2 842 aa7.23□□□□□ -1.25
LRCH3-211ENST00000466054 VIPR1P32241 457 aa7.22□□□□□ -1.25
LRCH3-211ENST00000466054 CHMP4BP1P59074 171 aa7.22□□□□□ -1.25
LRCH3-211ENST00000466054 MCATQ8IVS2 390 aaKnown RBP7.22□□□□□ -1.25
LRCH3-211ENST00000466054 ASCC2Q9H1I8 757 aaPredicted RBP7.22□□□□□ -1.25
LRCH3-211ENST00000466054 RNF19AQ9NV58 838 aa7.22□□□□□ -1.25
LRCH3-211ENST00000466054 GFRA2O00451 464 aa7.21□□□□□ -1.26
LRCH3-211ENST00000466054 ABLIM1O14639 778 aa7.21□□□□□ -1.26
LRCH3-211ENST00000466054 USP17L7P0C7H9 530 aa7.21□□□□□ -1.26
LRCH3-211ENST00000466054 RPL10P27635 214 aaKnown RBP7.21□□□□□ -1.26
LRCH3-211ENST00000466054 TEKQ02763 1124 aa7.21□□□□□ -1.26
LRCH3-211ENST00000466054 NLRX1Q86UT6 975 aa7.21□□□□□ -1.26
LRCH3-211ENST00000466054 MZB1Q8WU39 189 aa7.21□□□□□ -1.26
LRCH3-211ENST00000466054 CYB5D2Q8WUJ1 264 aa7.21□□□□□ -1.26
LRCH3-211ENST00000466054 MRRFQ96E11 262 aaKnown RBP7.21□□□□□ -1.26
LRCH3-211ENST00000466054 CNTD2Q9H8S5 307 aa7.21□□□□□ -1.26
LRCH3-211ENST00000466054 CILPO75339 1184 aa7.2□□□□□ -1.26
LRCH3-211ENST00000466054 USP2O75604 605 aaPredicted RBP7.2□□□□□ -1.26
LRCH3-211ENST00000466054 RBM25P49756 843 aaKnown RBP7.2□□□□□ -1.26
LRCH3-211ENST00000466054 CEP128Q6ZU80 1094 aa7.2□□□□□ -1.26
LRCH3-211ENST00000466054 RNF141Q8WVD5 230 aa7.2□□□□□ -1.26
LRCH3-211ENST00000466054 LINC01599Q8WXQ3 324 aa7.2□□□□□ -1.26
LRCH3-211ENST00000466054 FAM161BQ96MY7 647 aa7.2□□□□□ -1.26
LRCH3-211ENST00000466054 PWWP2AQ96N64 755 aa7.2□□□□□ -1.26
LRCH3-211ENST00000466054 CRTAC1Q9NQ79 661 aa7.2□□□□□ -1.26
LRCH3-211ENST00000466054 VTI1BQ9UEU0 232 aa7.2□□□□□ -1.26
LRCH3-211ENST00000466054 ADAM30Q9UKF2 790 aa7.2□□□□□ -1.26
LRCH3-211ENST00000466054 MYRFQ9Y2G1 1151 aa7.2□□□□□ -1.26
LRCH3-211ENST00000466054 SSU72P8A0A1W2PR75 194 aa7.19□□□□□ -1.26
LRCH3-211ENST00000466054 UNCXA6NJT0 531 aa7.19□□□□□ -1.26
LRCH3-211ENST00000466054 YARSP54577 528 aaKnown RBP7.19□□□□□ -1.26
LRCH3-211ENST00000466054 LINC01356Q8N9X3 169 aa7.19□□□□□ -1.26
LRCH3-211ENST00000466054 FAM13CQ8NE31 585 aa7.19□□□□□ -1.26
LRCH3-211ENST00000466054 CRELD1Q96HD1 420 aa7.19□□□□□ -1.26
LRCH3-211ENST00000466054 EBF1Q9UH73 591 aa7.19□□□□□ -1.26
LRCH3-211ENST00000466054 K7ESM1 405 aa7.18□□□□□ -1.26
LRCH3-211ENST00000466054 SUV39H1O43463 412 aa7.18□□□□□ -1.26
LRCH3-211ENST00000466054 LRRN2O75325 713 aa7.18□□□□□ -1.26
LRCH3-211ENST00000466054 SDHBP21912 280 aa7.18□□□□□ -1.26
LRCH3-211ENST00000466054 RPS26P62854 115 aaKnown RBP7.18□□□□□ -1.26
LRCH3-211ENST00000466054 CCDC85BQ15834 202 aaPredicted RBP7.18□□□□□ -1.26
LRCH3-211ENST00000466054 ZNF827Q17R98 1081 aa7.18□□□□□ -1.26
LRCH3-211ENST00000466054 WAPLQ7Z5K2 1190 aa7.18□□□□□ -1.26
LRCH3-211ENST00000466054 FAM129CQ86XR2 697 aa7.18□□□□□ -1.26
LRCH3-211ENST00000466054 ZNF428Q96B54 188 aa7.18□□□□□ -1.26
LRCH3-211ENST00000466054 MIR1-1HGQ9H1L0 117 aa7.18□□□□□ -1.26
LRCH3-211ENST00000466054 EPB41L4AQ9HCS5 686 aaPredicted RBP7.18□□□□□ -1.26
LRCH3-211ENST00000466054 E9PSI1 815 aa7.17□□□□□ -1.26
LRCH3-211ENST00000466054 IRS4O14654 1257 aaPredicted RBP7.17□□□□□ -1.26
LRCH3-211ENST00000466054 CDR1P51861 262 aa7.17□□□□□ -1.26
LRCH3-211ENST00000466054 TMEM62Q0P6H9 643 aa7.17□□□□□ -1.26
LRCH3-211ENST00000466054 RNF111Q6ZNA4 994 aa7.17□□□□□ -1.26
LRCH3-211ENST00000466054 ACSF2Q96CM8 615 aaPredicted RBP7.17□□□□□ -1.26
LRCH3-211ENST00000466054 KIAA1522Q9P206 1035 aaPredicted RBP7.17□□□□□ -1.26
LRCH3-211ENST00000466054 PCDHB5Q9Y5E4 795 aa7.17□□□□□ -1.26
LRCH3-211ENST00000466054 NRDCO43847 1150 aa7.16□□□□□ -1.26
LRCH3-211ENST00000466054 MPOP05164 745 aa7.16□□□□□ -1.26
LRCH3-211ENST00000466054 CTSHP09668 335 aa7.16□□□□□ -1.26
LRCH3-211ENST00000466054 ARL4AP40617 200 aa7.16□□□□□ -1.26
LRCH3-211ENST00000466054 KIR2DL1P43626 348 aaPredicted RBP7.16□□□□□ -1.26
LRCH3-211ENST00000466054 KIR2DL2P43627 348 aaPredicted RBP7.16□□□□□ -1.26
LRCH3-211ENST00000466054 ST13P50502 369 aaKnown RBP7.16□□□□□ -1.26
LRCH3-211ENST00000466054 RTP5Q14D33 572 aa7.16□□□□□ -1.26
LRCH3-211ENST00000466054 UBXN11Q5T124 520 aa7.16□□□□□ -1.26
LRCH3-211ENST00000466054 TMC6Q7Z403 805 aa7.16□□□□□ -1.26
LRCH3-211ENST00000466054 USP40Q9NVE5 1235 aa7.16□□□□□ -1.26
LRCH3-211ENST00000466054 USP31Q70CQ4 1352 aa7.16□□□□□ -1.26
LRCH3-211ENST00000466054 PNLIPP16233 465 aa7.15□□□□□ -1.26
LRCH3-211ENST00000466054 PLCG1P19174 1290 aa7.15□□□□□ -1.26
LRCH3-211ENST00000466054 KCNC1P48547 511 aa7.15□□□□□ -1.26
LRCH3-211ENST00000466054 YBX1P67809 324 aaKnown RBP7.15□□□□□ -1.26
LRCH3-211ENST00000466054 TAF1CQ15572 869 aaPredicted RBP7.15□□□□□ -1.26
LRCH3-211ENST00000466054 TSNAXIP1Q2TAA8 658 aa7.15□□□□□ -1.26
LRCH3-211ENST00000466054 HHIPL2Q6UWX4 724 aa7.15□□□□□ -1.26
LRCH3-211ENST00000466054 TMEFF1Q8IYR6 380 aa7.15□□□□□ -1.26
LRCH3-211ENST00000466054 MAP6Q96JE9 813 aa7.15□□□□□ -1.26
LRCH3-211ENST00000466054 ASPNQ9BXN1 380 aa7.15□□□□□ -1.26
LRCH3-211ENST00000466054 SHISA3A0PJX4 238 aa7.14□□□□□ -1.27
LRCH3-211ENST00000466054 NOTOA8MTQ0 251 aa7.14□□□□□ -1.27
LRCH3-211ENST00000466054 RECKO95980 971 aa7.14□□□□□ -1.27
LRCH3-211ENST00000466054 MAP3K11Q16584 847 aa7.14□□□□□ -1.27
LRCH3-211ENST00000466054 NPM2Q86SE8 214 aaKnown RBP7.14□□□□□ -1.27
LRCH3-211ENST00000466054 NLGN1Q8N2Q7 840 aa7.14□□□□□ -1.27
LRCH3-211ENST00000466054 G6PC3Q9BUM1 346 aa7.14□□□□□ -1.27
LRCH3-211ENST00000466054 BACH2Q9BYV9 841 aa7.14□□□□□ -1.27
LRCH3-211ENST00000466054 SRRDQ9UH36 339 aa7.14□□□□□ -1.27
LRCH3-211ENST00000466054 LDHDQ86WU2 507 aa7.13□□□□□ -1.27
LRCH3-211ENST00000466054 TMEM87AQ8NBN3 555 aa7.13□□□□□ -1.27
LRCH3-211ENST00000466054 JARID2Q92833 1246 aaPredicted RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms