RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 SH3TC2Q8TF17 1288 aa15.25■□□□□ 0.03
COL5A1-206ENST00000465877 MKL1Q969V6 931 aa15.25■□□□□ 0.03
COL5A1-206ENST00000465877 ATG4CQ96DT6 458 aa15.25■□□□□ 0.03
COL5A1-206ENST00000465877 FBXO28Q9NVF7 368 aa15.25■□□□□ 0.03
COL5A1-206ENST00000465877 CTNNA3Q9UI47 895 aa15.25■□□□□ 0.03
COL5A1-206ENST00000465877 MAPK4P31152 587 aa15.24■□□□□ 0.03
COL5A1-206ENST00000465877 DSG3P32926 999 aa15.24■□□□□ 0.03
COL5A1-206ENST00000465877 SOX10P56693 466 aa15.24■□□□□ 0.03
COL5A1-206ENST00000465877 CCNA1P78396 465 aa15.24■□□□□ 0.03
COL5A1-206ENST00000465877 PTH1RQ03431 593 aa15.24■□□□□ 0.03
COL5A1-206ENST00000465877 Q3C1V9 767 aa15.24■□□□□ 0.03
COL5A1-206ENST00000465877 SAMD1Q6SPF0 538 aaPredicted RBP15.24■□□□□ 0.03
COL5A1-206ENST00000465877 RASGRP2Q7LDG7 609 aa15.24■□□□□ 0.03
COL5A1-206ENST00000465877 MB21D1Q8N884 522 aa15.24■□□□□ 0.03
COL5A1-206ENST00000465877 ZNF333Q96JL9 665 aa15.24■□□□□ 0.03
COL5A1-206ENST00000465877 HOXC10Q9NYD6 342 aa15.24■□□□□ 0.03
COL5A1-206ENST00000465877 PPP1R9AQ9ULJ8 1098 aa15.24■□□□□ 0.03
COL5A1-206ENST00000465877 NOVP48745 357 aa15.23■□□□□ 0.03
COL5A1-206ENST00000465877 NT5C2P49902 561 aa15.23■□□□□ 0.03
COL5A1-206ENST00000465877 ERICH6BQ5W0A0 696 aa15.23■□□□□ 0.03
COL5A1-206ENST00000465877 GPR142Q7Z601 462 aa15.23■□□□□ 0.03
COL5A1-206ENST00000465877 CCAR1Q8IX12 1150 aaKnown RBP15.23■□□□□ 0.03
COL5A1-206ENST00000465877 SLAIN1Q8ND83 568 aa15.23■□□□□ 0.03
COL5A1-206ENST00000465877 NKX2-3Q8TAU0 364 aa15.23■□□□□ 0.03
COL5A1-206ENST00000465877 SOCS4Q8WXH5 440 aa15.23■□□□□ 0.03
COL5A1-206ENST00000465877 ESR2Q92731 530 aa15.23■□□□□ 0.03
COL5A1-206ENST00000465877 SLF1Q9BQI6 1058 aa15.23■□□□□ 0.03
COL5A1-206ENST00000465877 CWC22Q9HCG8 908 aaKnown RBP15.23■□□□□ 0.03
COL5A1-206ENST00000465877 KIAA0100Q14667 2235 aaKnown RBP15.23■□□□□ 0.03
COL5A1-206ENST00000465877 B4E1Z4 1266 aa15.22■□□□□ 0.03
COL5A1-206ENST00000465877 GRK4P32298 578 aa15.22■□□□□ 0.03
COL5A1-206ENST00000465877 IRF5Q13568 498 aa15.22■□□□□ 0.03
COL5A1-206ENST00000465877 SLFN13Q68D06 897 aa15.22■□□□□ 0.03
COL5A1-206ENST00000465877 NBPF11Q86T75 865 aa15.22■□□□□ 0.03
COL5A1-206ENST00000465877 ESYT1Q9BSJ8 1104 aa15.22■□□□□ 0.03
COL5A1-206ENST00000465877 SPATC1LQ9H0A9 340 aa15.22■□□□□ 0.03
COL5A1-206ENST00000465877 TCP11L1Q9NUJ3 509 aa15.22■□□□□ 0.03
COL5A1-206ENST00000465877 PPP4R2Q9NY27 417 aa15.22■□□□□ 0.03
COL5A1-206ENST00000465877 U3KPZ7 1027 aaPredicted RBP15.22■□□□□ 0.03
COL5A1-206ENST00000465877 LCTP09848 1927 aa15.21■□□□□ 0.03
COL5A1-206ENST00000465877 LRRC37A2A6NM11 1700 aa15.21■□□□□ 0.03
COL5A1-206ENST00000465877 ADCY3O60266 1144 aa15.21■□□□□ 0.03
COL5A1-206ENST00000465877 KDM4AO75164 1064 aa15.21■□□□□ 0.03
COL5A1-206ENST00000465877 CYP21A2P08686 494 aa15.21■□□□□ 0.03
COL5A1-206ENST00000465877 ELNP15502 786 aa15.21■□□□□ 0.03
COL5A1-206ENST00000465877 WDR78Q5VTH9 848 aa15.21■□□□□ 0.03
COL5A1-206ENST00000465877 PLEKHH3Q7Z736 793 aa15.21■□□□□ 0.03
COL5A1-206ENST00000465877 GMCL1Q96IK5 515 aa15.21■□□□□ 0.03
COL5A1-206ENST00000465877 MOV10L1Q9BXT6 1211 aaKnown RBP15.21■□□□□ 0.03
COL5A1-206ENST00000465877 CNNM2Q9H8M5 875 aa15.21■□□□□ 0.03
COL5A1-206ENST00000465877 ISY1Q9ULR0 285 aaKnown RBP15.21■□□□□ 0.03
COL5A1-206ENST00000465877 ADAMTS5Q9UNA0 930 aa15.21■□□□□ 0.03
COL5A1-206ENST00000465877 VWA5AO00534 786 aa15.2■□□□□ 0.02
COL5A1-206ENST00000465877 CDC45O75419 566 aa15.2■□□□□ 0.02
COL5A1-206ENST00000465877 TOP1P11387 765 aaKnown RBP15.2■□□□□ 0.02
COL5A1-206ENST00000465877 BMP3P12645 472 aa15.2■□□□□ 0.02
COL5A1-206ENST00000465877 STAT2P52630 851 aa15.2■□□□□ 0.02
COL5A1-206ENST00000465877 PLS1Q14651 629 aa15.2■□□□□ 0.02
COL5A1-206ENST00000465877 TMEM132BQ14DG7 1078 aa15.2■□□□□ 0.02
COL5A1-206ENST00000465877 RCSD1Q6JBY9 416 aa15.2■□□□□ 0.02
COL5A1-206ENST00000465877 IQCA1Q86XH1 822 aa15.2■□□□□ 0.02
COL5A1-206ENST00000465877 SHCBP1Q8NEM2 672 aa15.2■□□□□ 0.02
COL5A1-206ENST00000465877 REPS2Q8NFH8 660 aa15.2■□□□□ 0.02
COL5A1-206ENST00000465877 PXYLP1Q8TE99 480 aa15.2■□□□□ 0.02
COL5A1-206ENST00000465877 NUDT12Q9BQG2 462 aa15.2■□□□□ 0.02
COL5A1-206ENST00000465877 TMEM47Q9BQJ4 181 aa15.2■□□□□ 0.02
COL5A1-206ENST00000465877 ZKSCAN3Q9BRR0 538 aa15.2■□□□□ 0.02
COL5A1-206ENST00000465877 KRT23Q9C075 422 aa15.2■□□□□ 0.02
COL5A1-206ENST00000465877 GJD2Q9UKL4 321 aa15.2■□□□□ 0.02
COL5A1-206ENST00000465877 ZNF214Q9UL59 606 aaPredicted RBP15.2■□□□□ 0.02
COL5A1-206ENST00000465877 MTMR7Q9Y216 660 aa15.2■□□□□ 0.02
COL5A1-206ENST00000465877 RBM8AQ9Y5S9 174 aaKnown RBP15.2■□□□□ 0.02
COL5A1-206ENST00000465877 MYCP01106 439 aaPredicted RBP15.19■□□□□ 0.02
COL5A1-206ENST00000465877 INHAP05111 366 aa15.19■□□□□ 0.02
COL5A1-206ENST00000465877 SLC1A4P43007 532 aa15.19■□□□□ 0.02
COL5A1-206ENST00000465877 GRB14Q14449 540 aa15.19■□□□□ 0.02
COL5A1-206ENST00000465877 MORN1Q5T089 497 aa15.19■□□□□ 0.02
COL5A1-206ENST00000465877 DCAF4Q8WV16 495 aa15.19■□□□□ 0.02
COL5A1-206ENST00000465877 MAP4K1Q92918 833 aa15.19■□□□□ 0.02
COL5A1-206ENST00000465877 KIFC2Q96AC6 838 aa15.19■□□□□ 0.02
COL5A1-206ENST00000465877 CHMP4CQ96CF2 233 aa15.19■□□□□ 0.02
COL5A1-206ENST00000465877 APBA2Q99767 749 aa15.19■□□□□ 0.02
COL5A1-206ENST00000465877 LSG1Q9H089 658 aaKnown RBP15.19■□□□□ 0.02
COL5A1-206ENST00000465877 ANO2Q9NQ90 1003 aa15.19■□□□□ 0.02
COL5A1-206ENST00000465877 FEM1BQ9UK73 627 aa15.19■□□□□ 0.02
COL5A1-206ENST00000465877 TAF6LQ9Y6J9 622 aa15.19■□□□□ 0.02
COL5A1-206ENST00000465877 IVNS1ABPQ9Y6Y0 642 aa15.19■□□□□ 0.02
COL5A1-206ENST00000465877 TNKSO95271 1327 aa15.18■□□□□ 0.02
COL5A1-206ENST00000465877 TMEM232C9JQI7 657 aa15.18■□□□□ 0.02
COL5A1-206ENST00000465877 HMGCRP04035 888 aa15.18■□□□□ 0.02
COL5A1-206ENST00000465877 ERCC3P19447 782 aa15.18■□□□□ 0.02
COL5A1-206ENST00000465877 CYP2B6P20813 491 aa15.18■□□□□ 0.02
COL5A1-206ENST00000465877 PTPREP23469 700 aa15.18■□□□□ 0.02
COL5A1-206ENST00000465877 MCCP23508 829 aa15.18■□□□□ 0.02
COL5A1-206ENST00000465877 RGS2P41220 211 aa15.18■□□□□ 0.02
COL5A1-206ENST00000465877 UBXN2AP68543 259 aa15.18■□□□□ 0.02
COL5A1-206ENST00000465877 MTFR1Q15390 333 aa15.18■□□□□ 0.02
COL5A1-206ENST00000465877 CCDC96Q2M329 555 aa15.18■□□□□ 0.02
COL5A1-206ENST00000465877 CASC1Q6TDU7 716 aa15.18■□□□□ 0.02
COL5A1-206ENST00000465877 KIAA1211Q6ZU35 1233 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms