RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 USP14P54578 494 aa19.69■□□□□ 0.74
EXOSC3-203ENST00000465229 HMGCS2P54868 508 aa19.69■□□□□ 0.74
EXOSC3-203ENST00000465229 CCT2P78371 535 aaKnown RBP19.69■□□□□ 0.74
EXOSC3-203ENST00000465229 SH3D19Q5HYK7 790 aa19.69■□□□□ 0.74
EXOSC3-203ENST00000465229 RGMBQ6NW40 437 aa19.69■□□□□ 0.74
EXOSC3-203ENST00000465229 USP17L2Q6R6M4 530 aa19.69■□□□□ 0.74
EXOSC3-203ENST00000465229 NECAB1Q8N987 351 aa19.69■□□□□ 0.74
EXOSC3-203ENST00000465229 MAP3K14Q99558 947 aa19.69■□□□□ 0.74
EXOSC3-203ENST00000465229 FAM217BQ9NTX9 383 aaPredicted RBP19.69■□□□□ 0.74
EXOSC3-203ENST00000465229 MYH4Q9Y623 1939 aa19.69■□□□□ 0.74
EXOSC3-203ENST00000465229 PHIPQ8WWQ0 1821 aa19.69■□□□□ 0.74
EXOSC3-203ENST00000465229 GOLGA8AA7E2F4 631 aa19.69■□□□□ 0.74
EXOSC3-203ENST00000465229 GRM4Q14833 912 aa19.69■□□□□ 0.74
EXOSC3-203ENST00000465229 SPRYD7Q5W111 196 aa19.69■□□□□ 0.74
EXOSC3-203ENST00000465229 GMCL1Q96IK5 515 aa19.69■□□□□ 0.74
EXOSC3-203ENST00000465229 NCOA5Q9HCD5 579 aaKnown RBP19.69■□□□□ 0.74
EXOSC3-203ENST00000465229 MAD2L2Q9UI95 211 aa19.69■□□□□ 0.74
EXOSC3-203ENST00000465229 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.69■□□□□ 0.74
EXOSC3-203ENST00000465229 BRD1O95696 1058 aa19.68■□□□□ 0.74
EXOSC3-203ENST00000465229 CDC27P30260 824 aa19.68■□□□□ 0.74
EXOSC3-203ENST00000465229 ADD1P35611 737 aaKnown RBP19.68■□□□□ 0.74
EXOSC3-203ENST00000465229 SLC1A4P43007 532 aa19.68■□□□□ 0.74
EXOSC3-203ENST00000465229 SCRN1Q12765 414 aa19.68■□□□□ 0.74
EXOSC3-203ENST00000465229 RTN1Q16799 776 aa19.68■□□□□ 0.74
EXOSC3-203ENST00000465229 STAG2Q8N3U4 1231 aa19.68■□□□□ 0.74
EXOSC3-203ENST00000465229 DCAF4Q8WV16 495 aa19.68■□□□□ 0.74
EXOSC3-203ENST00000465229 LPAR1Q92633 364 aa19.68■□□□□ 0.74
EXOSC3-203ENST00000465229 HHIPL1Q96JK4 782 aa19.68■□□□□ 0.74
EXOSC3-203ENST00000465229 C12orf42Q96LP6 360 aa19.68■□□□□ 0.74
EXOSC3-203ENST00000465229 NUP88Q99567 741 aaPredicted RBP19.68■□□□□ 0.74
EXOSC3-203ENST00000465229 ZDHHC9Q9Y397 364 aa19.68■□□□□ 0.74
EXOSC3-203ENST00000465229 A0A0G2JLL6 359 aaPredicted RBP19.67■□□□□ 0.74
EXOSC3-203ENST00000465229 PALM3A6NDB9 673 aaPredicted RBP19.67■□□□□ 0.74
EXOSC3-203ENST00000465229 PARP1P09874 1014 aaKnown RBP19.67■□□□□ 0.74
EXOSC3-203ENST00000465229 GOLGA8HP0CJ92 632 aa19.67■□□□□ 0.74
EXOSC3-203ENST00000465229 ZBTB48P10074 688 aaPredicted RBP19.67■□□□□ 0.74
EXOSC3-203ENST00000465229 ZNF543Q08ER8 600 aa19.67■□□□□ 0.74
EXOSC3-203ENST00000465229 ST3GAL1Q11201 340 aa19.67■□□□□ 0.74
EXOSC3-203ENST00000465229 MKRN3Q13064 507 aaKnown RBP19.67■□□□□ 0.74
EXOSC3-203ENST00000465229 PRRT2Q7Z6L0 340 aaPredicted RBP19.67■□□□□ 0.74
EXOSC3-203ENST00000465229 RASAL3Q86YV0 1011 aa19.67■□□□□ 0.74
EXOSC3-203ENST00000465229 CTCFLQ8NI51 663 aaPredicted RBP19.67■□□□□ 0.74
EXOSC3-203ENST00000465229 GTF3C6Q969F1 213 aa19.67■□□□□ 0.74
EXOSC3-203ENST00000465229 CREBZFQ9NS37 354 aa19.67■□□□□ 0.74
EXOSC3-203ENST00000465229 NID2Q14112 1375 aa19.67■□□□□ 0.74
EXOSC3-203ENST00000465229 BMP3P12645 472 aa19.66■□□□□ 0.74
EXOSC3-203ENST00000465229 VCAM1P19320 739 aa19.66■□□□□ 0.74
EXOSC3-203ENST00000465229 KIF5BP33176 963 aa19.66■□□□□ 0.74
EXOSC3-203ENST00000465229 SNAPC2Q13487 334 aa19.66■□□□□ 0.74
EXOSC3-203ENST00000465229 PPP2R5BQ15173 497 aa19.66■□□□□ 0.74
EXOSC3-203ENST00000465229 KCTD1Q719H9 257 aa19.66■□□□□ 0.74
EXOSC3-203ENST00000465229 MS4A4AQ96JQ5 239 aa19.66■□□□□ 0.74
EXOSC3-203ENST00000465229 TMOD4Q9NZQ9 345 aa19.66■□□□□ 0.74
EXOSC3-203ENST00000465229 FRMPD2Q68DX3 1309 aaPredicted RBP19.66■□□□□ 0.74
EXOSC3-203ENST00000465229 MOGSQ13724 837 aa19.65■□□□□ 0.74
EXOSC3-203ENST00000465229 PKP1Q13835 747 aa19.65■□□□□ 0.74
EXOSC3-203ENST00000465229 CCDC96Q2M329 555 aa19.65■□□□□ 0.74
EXOSC3-203ENST00000465229 ASPRV1Q53RT3 343 aa19.65■□□□□ 0.74
EXOSC3-203ENST00000465229 FAM83BQ5T0W9 1011 aa19.65■□□□□ 0.74
EXOSC3-203ENST00000465229 CCDC83Q8IWF9 413 aa19.65■□□□□ 0.74
EXOSC3-203ENST00000465229 GPCPD1Q9NPB8 672 aa19.65■□□□□ 0.74
EXOSC3-203ENST00000465229 CCDC196A0A1B0GTZ2 297 aa19.65■□□□□ 0.74
EXOSC3-203ENST00000465229 KLRF2D3W0D1 207 aa19.65■□□□□ 0.74
EXOSC3-203ENST00000465229 WDR46O15213 610 aaKnown RBP19.65■□□□□ 0.74
EXOSC3-203ENST00000465229 GPATCH4Q5T3I0 446 aaKnown RBP19.65■□□□□ 0.74
EXOSC3-203ENST00000465229 TTBK2Q6IQ55 1244 aa19.65■□□□□ 0.74
EXOSC3-203ENST00000465229 CMTR1Q8N1G2 835 aaKnown RBP19.65■□□□□ 0.74
EXOSC3-203ENST00000465229 RBM28Q9NW13 759 aaKnown RBP19.65■□□□□ 0.74
EXOSC3-203ENST00000465229 FAM155AB1AL88 458 aaPredicted RBP19.64■□□□□ 0.73
EXOSC3-203ENST00000465229 PLEKHA8P1O95397 391 aa19.64■□□□□ 0.73
EXOSC3-203ENST00000465229 SLC10A3P09131 477 aa19.64■□□□□ 0.73
EXOSC3-203ENST00000465229 PDIA4P13667 645 aaKnown RBP19.64■□□□□ 0.73
EXOSC3-203ENST00000465229 GTF2A2P52657 109 aa19.64■□□□□ 0.73
EXOSC3-203ENST00000465229 NTRK3Q16288 839 aa19.64■□□□□ 0.73
EXOSC3-203ENST00000465229 TMTC3Q6ZXV5 915 aa19.64■□□□□ 0.73
EXOSC3-203ENST00000465229 NBPF11Q86T75 865 aa19.64■□□□□ 0.73
EXOSC3-203ENST00000465229 CCDC102AQ96A19 550 aa19.64■□□□□ 0.73
EXOSC3-203ENST00000465229 RASSF10A6NK89 507 aa19.63■□□□□ 0.73
EXOSC3-203ENST00000465229 TMEM232C9JQI7 657 aa19.63■□□□□ 0.73
EXOSC3-203ENST00000465229 CTDNEP1O95476 244 aa19.63■□□□□ 0.73
EXOSC3-203ENST00000465229 GNAQP50148 359 aa19.63■□□□□ 0.73
EXOSC3-203ENST00000465229 SLC35G1Q2M3R5 365 aa19.63■□□□□ 0.73
EXOSC3-203ENST00000465229 TREML2Q5T2D2 321 aa19.63■□□□□ 0.73
EXOSC3-203ENST00000465229 GADL1Q6ZQY3 521 aa19.63■□□□□ 0.73
EXOSC3-203ENST00000465229 FASTKD5Q7L8L6 764 aaKnown RBP19.63■□□□□ 0.73
EXOSC3-203ENST00000465229 SRBD1Q8N5C6 995 aaKnown RBP19.63■□□□□ 0.73
EXOSC3-203ENST00000465229 PROCA1Q8NCQ7 364 aaPredicted RBP19.63■□□□□ 0.73
EXOSC3-203ENST00000465229 UBA5Q9GZZ9 404 aa19.63■□□□□ 0.73
EXOSC3-203ENST00000465229 CPVLQ9H3G5 476 aa19.63■□□□□ 0.73
EXOSC3-203ENST00000465229 RPAP3Q9H6T3 665 aaPredicted RBP19.63■□□□□ 0.73
EXOSC3-203ENST00000465229 ISY1Q9ULR0 285 aaKnown RBP19.63■□□□□ 0.73
EXOSC3-203ENST00000465229 WDR33Q9C0J8 1336 aaKnown RBP19.63■□□□□ 0.73
EXOSC3-203ENST00000465229 DHX16O60231 1041 aaKnown RBP19.62■□□□□ 0.73
EXOSC3-203ENST00000465229 DTNBO60941 627 aa19.62■□□□□ 0.73
EXOSC3-203ENST00000465229 CETPP11597 493 aa19.62■□□□□ 0.73
EXOSC3-203ENST00000465229 SLC16A2P36021 539 aa19.62■□□□□ 0.73
EXOSC3-203ENST00000465229 FUT2Q10981 343 aa19.62■□□□□ 0.73
EXOSC3-203ENST00000465229 CCDC82Q8N4S0 544 aa19.62■□□□□ 0.73
EXOSC3-203ENST00000465229 CPLX1O14810 134 aa19.62■□□□□ 0.73
EXOSC3-203ENST00000465229 DEFB115Q30KQ5 88 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms