RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 C9orf50Q5SZB4 431 aa13.21□□□□□ -0.29
COL11A1-207ENST00000465209 RPAP2Q8IXW5 612 aaPredicted RBP13.21□□□□□ -0.29
COL11A1-207ENST00000465209 HAUS7Q99871 368 aa13.21□□□□□ -0.29
COL11A1-207ENST00000465209 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.21□□□□□ -0.29
COL11A1-207ENST00000465209 ARHGEF10LQ9HCE6 1279 aa13.21□□□□□ -0.29
COL11A1-207ENST00000465209 FBXO28Q9NVF7 368 aa13.21□□□□□ -0.29
COL11A1-207ENST00000465209 ZNF214Q9UL59 606 aaPredicted RBP13.21□□□□□ -0.29
COL11A1-207ENST00000465209 MCM3APO60318 1980 aa13.2□□□□□ -0.3
COL11A1-207ENST00000465209 TRIM43BA6NCK2 446 aa13.2□□□□□ -0.3
COL11A1-207ENST00000465209 APBB1O00213 710 aa13.2□□□□□ -0.3
COL11A1-207ENST00000465209 IFIT2P09913 472 aaKnown RBP13.2□□□□□ -0.3
COL11A1-207ENST00000465209 SH3RF1Q7Z6J0 888 aa13.2□□□□□ -0.3
COL11A1-207ENST00000465209 NCAPG2Q86XI2 1143 aa13.2□□□□□ -0.3
COL11A1-207ENST00000465209 ARRDC4Q8NCT1 418 aa13.2□□□□□ -0.3
COL11A1-207ENST00000465209 TRIM43Q96BQ3 446 aaPredicted RBP13.2□□□□□ -0.3
COL11A1-207ENST00000465209 CCDC17Q96LX7 622 aa13.2□□□□□ -0.3
COL11A1-207ENST00000465209 LBHD1Q9BQE6 289 aaPredicted RBP13.2□□□□□ -0.3
COL11A1-207ENST00000465209 BOLA2Q9H3K6 86 aa13.2□□□□□ -0.3
COL11A1-207ENST00000465209 ATP11BQ9Y2G3 1177 aa13.2□□□□□ -0.3
COL11A1-207ENST00000465209 USP17L12C9JPN9 530 aa13.19□□□□□ -0.3
COL11A1-207ENST00000465209 KBTBD13C9JR72 458 aa13.19□□□□□ -0.3
COL11A1-207ENST00000465209 USP17L21D6R901 530 aa13.19□□□□□ -0.3
COL11A1-207ENST00000465209 RAB11FIP3O75154 756 aa13.19□□□□□ -0.3
COL11A1-207ENST00000465209 EEF2P13639 858 aaKnown RBP13.19□□□□□ -0.3
COL11A1-207ENST00000465209 ITGB8P26012 769 aa13.19□□□□□ -0.3
COL11A1-207ENST00000465209 PLS1Q14651 629 aa13.19□□□□□ -0.3
COL11A1-207ENST00000465209 UBE3CQ15386 1083 aa13.19□□□□□ -0.3
COL11A1-207ENST00000465209 SHHQ15465 462 aa13.19□□□□□ -0.3
COL11A1-207ENST00000465209 ZNF792Q3KQV3 632 aa13.19□□□□□ -0.3
COL11A1-207ENST00000465209 RIOX2Q8IUF8 465 aa13.19□□□□□ -0.3
COL11A1-207ENST00000465209 SH2D4AQ9H788 454 aa13.19□□□□□ -0.3
COL11A1-207ENST00000465209 NRBP1Q9UHY1 535 aa13.19□□□□□ -0.3
COL11A1-207ENST00000465209 PPP1R9AQ9ULJ8 1098 aa13.19□□□□□ -0.3
COL11A1-207ENST00000465209 PHF24Q9UPV7 400 aa13.19□□□□□ -0.3
COL11A1-207ENST00000465209 VWA5AO00534 786 aa13.18□□□□□ -0.3
COL11A1-207ENST00000465209 SLC25A27O95847 323 aa13.18□□□□□ -0.3
COL11A1-207ENST00000465209 ZNF865P0CJ78 1059 aaPredicted RBP13.18□□□□□ -0.3
COL11A1-207ENST00000465209 FCER1AP12319 257 aa13.18□□□□□ -0.3
COL11A1-207ENST00000465209 TAL1P17542 331 aaPredicted RBP13.18□□□□□ -0.3
COL11A1-207ENST00000465209 ADCYAP1R1P41586 468 aa13.18□□□□□ -0.3
COL11A1-207ENST00000465209 CTR9Q6PD62 1173 aa13.18□□□□□ -0.3
COL11A1-207ENST00000465209 MIER1Q8N108 512 aa13.18□□□□□ -0.3
COL11A1-207ENST00000465209 BADQ92934 168 aa13.18□□□□□ -0.3
COL11A1-207ENST00000465209 FAM161BQ96MY7 647 aa13.18□□□□□ -0.3
COL11A1-207ENST00000465209 COL25A1Q9BXS0 654 aaPredicted RBP13.18□□□□□ -0.3
COL11A1-207ENST00000465209 PUS7LQ9H0K6 701 aaKnown RBP13.18□□□□□ -0.3
COL11A1-207ENST00000465209 SLC5A4Q9NY91 659 aa13.18□□□□□ -0.3
COL11A1-207ENST00000465209 DDX19BQ9UMR2 479 aa13.18□□□□□ -0.3
COL11A1-207ENST00000465209 DIS3Q9Y2L1 958 aaKnown RBP13.18□□□□□ -0.3
COL11A1-207ENST00000465209 COG6Q9Y2V7 657 aa13.18□□□□□ -0.3
COL11A1-207ENST00000465209 LRRC37A2A6NM11 1700 aa13.17□□□□□ -0.3
COL11A1-207ENST00000465209 CHD9Q3L8U1 2897 aa13.17□□□□□ -0.3
COL11A1-207ENST00000465209 ADAMTS4O75173 837 aa13.17□□□□□ -0.3
COL11A1-207ENST00000465209 HMMRO75330 724 aa13.17□□□□□ -0.3
COL11A1-207ENST00000465209 PGK2P07205 417 aa13.17□□□□□ -0.3
COL11A1-207ENST00000465209 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.17□□□□□ -0.3
COL11A1-207ENST00000465209 FERMT2Q96AC1 680 aa13.17□□□□□ -0.3
COL11A1-207ENST00000465209 LENG1Q96BZ8 264 aaPredicted RBP13.17□□□□□ -0.3
COL11A1-207ENST00000465209 MMP19Q99542 508 aa13.17□□□□□ -0.3
COL11A1-207ENST00000465209 TINF2Q9BSI4 451 aa13.17□□□□□ -0.3
COL11A1-207ENST00000465209 TTYH1Q9H313 450 aaPredicted RBP13.17□□□□□ -0.3
COL11A1-207ENST00000465209 KANSL2Q9H9L4 492 aa13.17□□□□□ -0.3
COL11A1-207ENST00000465209 PRKAG2Q9UGJ0 569 aa13.17□□□□□ -0.3
COL11A1-207ENST00000465209 CHD7Q9P2D1 2997 aa13.16□□□□□ -0.3
COL11A1-207ENST00000465209 A0A1W2PQ45 241 aaPredicted RBP13.16□□□□□ -0.3
COL11A1-207ENST00000465209 A0A1W2PQY0 241 aa13.16□□□□□ -0.3
COL11A1-207ENST00000465209 EPHB4P54760 987 aa13.16□□□□□ -0.3
COL11A1-207ENST00000465209 FAM83BQ5T0W9 1011 aa13.16□□□□□ -0.3
COL11A1-207ENST00000465209 ZNF697Q5TEC3 545 aa13.16□□□□□ -0.3
COL11A1-207ENST00000465209 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.16□□□□□ -0.3
COL11A1-207ENST00000465209 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.16□□□□□ -0.3
COL11A1-207ENST00000465209 XPNPEP3Q9NQH7 507 aa13.16□□□□□ -0.3
COL11A1-207ENST00000465209 PRDM5Q9NQX1 630 aaPredicted RBP13.16□□□□□ -0.3
COL11A1-207ENST00000465209 SLC4A4Q9Y6R1 1079 aa13.16□□□□□ -0.3
COL11A1-207ENST00000465209 DNAJC25-GNG10A0A024R161 153 aa13.15□□□□□ -0.3
COL11A1-207ENST00000465209 IGKV6D-41A0A0C4DH26 115 aa13.15□□□□□ -0.3
COL11A1-207ENST00000465209 PGK1P00558 417 aa13.15□□□□□ -0.3
COL11A1-207ENST00000465209 RARBP10826 455 aa13.15□□□□□ -0.3
COL11A1-207ENST00000465209 MS4A1P11836 297 aa13.15□□□□□ -0.3
COL11A1-207ENST00000465209 RASA1P20936 1047 aa13.15□□□□□ -0.3
COL11A1-207ENST00000465209 STAT3P40763 770 aa13.15□□□□□ -0.3
COL11A1-207ENST00000465209 SMAD3P84022 425 aaKnown RBP13.15□□□□□ -0.3
COL11A1-207ENST00000465209 TLE2Q04725 743 aa13.15□□□□□ -0.3
COL11A1-207ENST00000465209 SBK1Q52WX2 424 aa13.15□□□□□ -0.3
COL11A1-207ENST00000465209 CCSAPQ6IQ19 270 aaPredicted RBP13.15□□□□□ -0.3
COL11A1-207ENST00000465209 CDX2Q99626 313 aaPredicted RBP13.15□□□□□ -0.3
COL11A1-207ENST00000465209 SEMA6BQ9H3T3 888 aa13.15□□□□□ -0.3
COL11A1-207ENST00000465209 GOPCQ9HD26 462 aa13.15□□□□□ -0.3
COL11A1-207ENST00000465209 ARPP21Q9UBL0 812 aaPredicted RBP13.15□□□□□ -0.3
COL11A1-207ENST00000465209 LCTP09848 1927 aa13.15□□□□□ -0.3
COL11A1-207ENST00000465209 SYNRGQ9UMZ2 1314 aa13.14□□□□□ -0.31
COL11A1-207ENST00000465209 REV3LO60673 3130 aa13.14□□□□□ -0.31
COL11A1-207ENST00000465209 GSG1L2A8MUP6 293 aa13.14□□□□□ -0.31
COL11A1-207ENST00000465209 KIAA0355O15063 1070 aa13.14□□□□□ -0.31
COL11A1-207ENST00000465209 ADCY6O43306 1168 aa13.14□□□□□ -0.31
COL11A1-207ENST00000465209 CLTBP09497 229 aa13.14□□□□□ -0.31
COL11A1-207ENST00000465209 AKR1A1P14550 325 aa13.14□□□□□ -0.31
COL11A1-207ENST00000465209 COPB2P35606 906 aa13.14□□□□□ -0.31
COL11A1-207ENST00000465209 SAMD1Q6SPF0 538 aaPredicted RBP13.14□□□□□ -0.31
COL11A1-207ENST00000465209 MAMDC4Q6UXC1 1216 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms