RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 ISY1Q9ULR0 285 aaKnown RBP20.1■□□□□ 0.81
VPS52-215ENST00000464425 MTMR7Q9Y216 660 aa20.1■□□□□ 0.81
VPS52-215ENST00000464425 B4E1Z4 1266 aa20.09■□□□□ 0.81
VPS52-215ENST00000464425 MYCP01106 439 aaPredicted RBP20.09■□□□□ 0.81
VPS52-215ENST00000464425 MAPK4P31152 587 aa20.09■□□□□ 0.81
VPS52-215ENST00000464425 CCNA1P78396 465 aa20.09■□□□□ 0.81
VPS52-215ENST00000464425 WDR78Q5VTH9 848 aa20.09■□□□□ 0.81
VPS52-215ENST00000464425 ZKSCAN3Q9BRR0 538 aa20.09■□□□□ 0.81
VPS52-215ENST00000464425 ESYT1Q9BSJ8 1104 aa20.09■□□□□ 0.81
VPS52-215ENST00000464425 CWC22Q9HCG8 908 aaKnown RBP20.09■□□□□ 0.81
VPS52-215ENST00000464425 TCP11L1Q9NUJ3 509 aa20.09■□□□□ 0.81
VPS52-215ENST00000464425 SYNPO2Q9UMS6 1093 aa20.09■□□□□ 0.81
VPS52-215ENST00000464425 U3KPZ7 1027 aaPredicted RBP20.09■□□□□ 0.81
VPS52-215ENST00000464425 MGAMO43451 1857 aa20.09■□□□□ 0.81
VPS52-215ENST00000464425 DOCK3Q8IZD9 2030 aa20.09■□□□□ 0.81
VPS52-215ENST00000464425 MYH4Q9Y623 1939 aa20.08■□□□□ 0.81
VPS52-215ENST00000464425 KDM4AO75164 1064 aa20.08■□□□□ 0.81
VPS52-215ENST00000464425 MCCP23508 829 aa20.08■□□□□ 0.81
VPS52-215ENST00000464425 SOX10P56693 466 aa20.08■□□□□ 0.81
VPS52-215ENST00000464425 PLS1Q14651 629 aa20.08■□□□□ 0.81
VPS52-215ENST00000464425 NBPF11Q86T75 865 aa20.08■□□□□ 0.81
VPS52-215ENST00000464425 ARMC5Q96C12 935 aa20.08■□□□□ 0.81
VPS52-215ENST00000464425 SLF1Q9BQI6 1058 aa20.08■□□□□ 0.81
VPS52-215ENST00000464425 GJD2Q9UKL4 321 aa20.08■□□□□ 0.81
VPS52-215ENST00000464425 PPP1R9AQ9ULJ8 1098 aa20.08■□□□□ 0.81
VPS52-215ENST00000464425 CENPFP49454 3210 aa20.08■□□□□ 0.8
VPS52-215ENST00000464425 BMP3P12645 472 aa20.07■□□□□ 0.8
VPS52-215ENST00000464425 NOVP48745 357 aa20.07■□□□□ 0.8
VPS52-215ENST00000464425 GPR142Q7Z601 462 aa20.07■□□□□ 0.8
VPS52-215ENST00000464425 PLEKHH3Q7Z736 793 aa20.07■□□□□ 0.8
VPS52-215ENST00000464425 MB21D1Q8N884 522 aa20.07■□□□□ 0.8
VPS52-215ENST00000464425 MAP4K1Q92918 833 aa20.07■□□□□ 0.8
VPS52-215ENST00000464425 TMEM47Q9BQJ4 181 aa20.07■□□□□ 0.8
VPS52-215ENST00000464425 MOV10L1Q9BXT6 1211 aaKnown RBP20.07■□□□□ 0.8
VPS52-215ENST00000464425 SPATC1LQ9H0A9 340 aa20.07■□□□□ 0.8
VPS52-215ENST00000464425 ADAMTS5Q9UNA0 930 aa20.07■□□□□ 0.8
VPS52-215ENST00000464425 VWA5AO00534 786 aa20.06■□□□□ 0.8
VPS52-215ENST00000464425 ADCY3O60266 1144 aa20.06■□□□□ 0.8
VPS52-215ENST00000464425 CYP21A2P08686 494 aa20.06■□□□□ 0.8
VPS52-215ENST00000464425 TOP1P11387 765 aaKnown RBP20.06■□□□□ 0.8
VPS52-215ENST00000464425 ELNP15502 786 aa20.06■□□□□ 0.8
VPS52-215ENST00000464425 GRK4P32298 578 aa20.06■□□□□ 0.8
VPS52-215ENST00000464425 SLC1A4P43007 532 aa20.06■□□□□ 0.8
VPS52-215ENST00000464425 TMEM132BQ14DG7 1078 aa20.06■□□□□ 0.8
VPS52-215ENST00000464425 RASGRP2Q7LDG7 609 aa20.06■□□□□ 0.8
VPS52-215ENST00000464425 KIFC2Q96AC6 838 aa20.06■□□□□ 0.8
VPS52-215ENST00000464425 KRT23Q9C075 422 aa20.06■□□□□ 0.8
VPS52-215ENST00000464425 LSG1Q9H089 658 aaKnown RBP20.06■□□□□ 0.8
VPS52-215ENST00000464425 ZSWIM5Q9P217 1185 aa20.06■□□□□ 0.8
VPS52-215ENST00000464425 BIN2Q9UBW5 565 aaPredicted RBP20.06■□□□□ 0.8
VPS52-215ENST00000464425 RBM8AQ9Y5S9 174 aaKnown RBP20.06■□□□□ 0.8
VPS52-215ENST00000464425 RLFQ13129 1914 aa20.06■□□□□ 0.8
VPS52-215ENST00000464425 CYP2B6P20813 491 aa20.05■□□□□ 0.8
VPS52-215ENST00000464425 RCSD1Q6JBY9 416 aa20.05■□□□□ 0.8
VPS52-215ENST00000464425 KCTD1Q719H9 257 aa20.05■□□□□ 0.8
VPS52-215ENST00000464425 PRPF38AQ8NAV1 312 aaKnown RBP20.05■□□□□ 0.8
VPS52-215ENST00000464425 GMCL1Q96IK5 515 aa20.05■□□□□ 0.8
VPS52-215ENST00000464425 ZNF333Q96JL9 665 aa20.05■□□□□ 0.8
VPS52-215ENST00000464425 NUDT12Q9BQG2 462 aa20.05■□□□□ 0.8
VPS52-215ENST00000464425 CNNM2Q9H8M5 875 aa20.05■□□□□ 0.8
VPS52-215ENST00000464425 ANO2Q9NQ90 1003 aa20.05■□□□□ 0.8
VPS52-215ENST00000464425 FEM1BQ9UK73 627 aa20.05■□□□□ 0.8
VPS52-215ENST00000464425 TAF6LQ9Y6J9 622 aa20.05■□□□□ 0.8
VPS52-215ENST00000464425 TMEM232C9JQI7 657 aa20.04■□□□□ 0.8
VPS52-215ENST00000464425 ERCC3P19447 782 aa20.04■□□□□ 0.8
VPS52-215ENST00000464425 IRF5Q13568 498 aa20.04■□□□□ 0.8
VPS52-215ENST00000464425 IQCA1Q86XH1 822 aa20.04■□□□□ 0.8
VPS52-215ENST00000464425 SLAIN1Q8ND83 568 aa20.04■□□□□ 0.8
VPS52-215ENST00000464425 TTC14Q96N46 770 aa20.04■□□□□ 0.8
VPS52-215ENST00000464425 LAMA4Q16363 1823 aa20.04■□□□□ 0.8
VPS52-215ENST00000464425 TRDNQ13061 729 aa20.03■□□□□ 0.8
VPS52-215ENST00000464425 IKQ13123 557 aaPredicted RBP20.03■□□□□ 0.8
VPS52-215ENST00000464425 CCDC96Q2M329 555 aa20.03■□□□□ 0.8
VPS52-215ENST00000464425 NCAPG2Q86XI2 1143 aa20.03■□□□□ 0.8
VPS52-215ENST00000464425 ZSCAN10Q96SZ4 725 aaPredicted RBP20.03■□□□□ 0.8
VPS52-215ENST00000464425 ZBED4O75132 1171 aa20.02■□□□□ 0.8
VPS52-215ENST00000464425 PTPREP23469 700 aa20.02■□□□□ 0.8
VPS52-215ENST00000464425 STAT3P40763 770 aa20.02■□□□□ 0.8
VPS52-215ENST00000464425 SLC4A3P48751 1232 aa20.02■□□□□ 0.8
VPS52-215ENST00000464425 NT5C2P49902 561 aa20.02■□□□□ 0.8
VPS52-215ENST00000464425 MORN1Q5T089 497 aa20.02■□□□□ 0.8
VPS52-215ENST00000464425 CYB5R4Q7L1T6 521 aa20.02■□□□□ 0.8
VPS52-215ENST00000464425 DGKHQ86XP1 1220 aa20.02■□□□□ 0.8
VPS52-215ENST00000464425 REPS2Q8NFH8 660 aa20.02■□□□□ 0.8
VPS52-215ENST00000464425 PXYLP1Q8TE99 480 aa20.02■□□□□ 0.8
VPS52-215ENST00000464425 SOCS4Q8WXH5 440 aa20.02■□□□□ 0.8
VPS52-215ENST00000464425 UBAC1Q9BSL1 405 aa20.02■□□□□ 0.8
VPS52-215ENST00000464425 CTDP1Q9Y5B0 961 aaPredicted RBP20.02■□□□□ 0.8
VPS52-215ENST00000464425 IVNS1ABPQ9Y6Y0 642 aa20.02■□□□□ 0.8
VPS52-215ENST00000464425 E7EWF7 191 aa20.01■□□□□ 0.79
VPS52-215ENST00000464425 STAT2P52630 851 aa20.01■□□□□ 0.79
VPS52-215ENST00000464425 MTFR1Q15390 333 aa20.01■□□□□ 0.79
VPS52-215ENST00000464425 CCDC178Q5BJE1 867 aa20.01■□□□□ 0.79
VPS52-215ENST00000464425 STOX1Q6ZVD7 989 aa20.01■□□□□ 0.79
VPS52-215ENST00000464425 CPXCR1Q8N123 301 aa20.01■□□□□ 0.79
VPS52-215ENST00000464425 SHCBP1Q8NEM2 672 aa20.01■□□□□ 0.79
VPS52-215ENST00000464425 CHURC1Q8WUH1 139 aa20.01■□□□□ 0.79
VPS52-215ENST00000464425 DCAF4Q8WV16 495 aa20.01■□□□□ 0.79
VPS52-215ENST00000464425 USP6NLQ92738 828 aa20.01■□□□□ 0.79
VPS52-215ENST00000464425 FRMPD2Q68DX3 1309 aaPredicted RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 6 ms