RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 GPKOWQ92917 476 aaPredicted RBP eCLIP24.86■■□□□ 1.57
PDLIM2-216ENST00000464275 IDI2Q9BXS1 227 aa24.86■■□□□ 1.57
PDLIM2-216ENST00000464275 NAT10Q9H0A0 1025 aaKnown RBP24.86■■□□□ 1.57
PDLIM2-216ENST00000464275 NPM3O75607 178 aaKnown RBP24.85■■□□□ 1.57
PDLIM2-216ENST00000464275 RBM5P52756 815 aaKnown RBP eCLIP24.85■■□□□ 1.57
PDLIM2-216ENST00000464275 NFIAQ12857 509 aa24.85■■□□□ 1.57
PDLIM2-216ENST00000464275 MAP7D2Q96T17 732 aa24.85■■□□□ 1.57
PDLIM2-216ENST00000464275 DHX36Q9H2U1 1008 aaKnown RBP24.85■■□□□ 1.57
PDLIM2-216ENST00000464275 SPTLC3Q9NUV7 552 aa24.85■■□□□ 1.57
PDLIM2-216ENST00000464275 DYNC1I1O14576 645 aa24.85■■□□□ 1.57
PDLIM2-216ENST00000464275 GOLGA8HP0CJ92 632 aa24.85■■□□□ 1.57
PDLIM2-216ENST00000464275 SHMT1P34896 483 aa24.85■■□□□ 1.57
PDLIM2-216ENST00000464275 CCDC93Q567U6 631 aa24.85■■□□□ 1.57
PDLIM2-216ENST00000464275 KRBA2Q6ZNG9 492 aa24.85■■□□□ 1.57
PDLIM2-216ENST00000464275 DAGLBQ8NCG7 672 aa24.85■■□□□ 1.57
PDLIM2-216ENST00000464275 GOLGA6L19H0YKK7 550 aa24.84■■□□□ 1.57
PDLIM2-216ENST00000464275 NLRP12P59046 1061 aa24.84■■□□□ 1.57
PDLIM2-216ENST00000464275 GRIN1Q05586 938 aa24.84■■□□□ 1.57
PDLIM2-216ENST00000464275 WWC2Q6AWC2 1192 aa24.84■■□□□ 1.57
PDLIM2-216ENST00000464275 RTKN2Q8IZC4 609 aa24.84■■□□□ 1.57
PDLIM2-216ENST00000464275 FERMT2Q96AC1 680 aa24.84■■□□□ 1.57
PDLIM2-216ENST00000464275 PRIMPOLQ96LW4 560 aa24.84■■□□□ 1.57
PDLIM2-216ENST00000464275 BARHL2Q9NY43 387 aa24.84■■□□□ 1.57
PDLIM2-216ENST00000464275 NOM1Q5C9Z4 860 aaKnown RBP24.84■■□□□ 1.57
PDLIM2-216ENST00000464275 USP17L2Q6R6M4 530 aa24.84■■□□□ 1.57
PDLIM2-216ENST00000464275 PIK3AP1Q6ZUJ8 805 aa24.84■■□□□ 1.57
PDLIM2-216ENST00000464275 STXBP3O00186 592 aa24.83■■□□□ 1.57
PDLIM2-216ENST00000464275 PPP4R3BQ5MIZ7 849 aa24.83■■□□□ 1.57
PDLIM2-216ENST00000464275 CNNM3Q8NE01 707 aa24.83■■□□□ 1.57
PDLIM2-216ENST00000464275 CCDC17Q96LX7 622 aa24.83■■□□□ 1.57
PDLIM2-216ENST00000464275 TUBE1Q9UJT0 475 aa24.83■■□□□ 1.57
PDLIM2-216ENST00000464275 PCDHAC2Q9Y5I4 1007 aa24.83■■□□□ 1.57
PDLIM2-216ENST00000464275 TTLL1O95922 423 aa24.82■■□□□ 1.56
PDLIM2-216ENST00000464275 NOLC1Q14978 699 aaKnown RBP eCLIP24.82■■□□□ 1.56
PDLIM2-216ENST00000464275 ZNF174Q15697 407 aa24.82■■□□□ 1.56
PDLIM2-216ENST00000464275 LONRF3Q496Y0 759 aa24.82■■□□□ 1.56
PDLIM2-216ENST00000464275 SPECC1Q5M775 1068 aa24.82■■□□□ 1.56
PDLIM2-216ENST00000464275 HEATR3Q7Z4Q2 680 aa24.82■■□□□ 1.56
PDLIM2-216ENST00000464275 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.82■■□□□ 1.56
PDLIM2-216ENST00000464275 RRP36Q96EU6 259 aaKnown RBP24.82■■□□□ 1.56
PDLIM2-216ENST00000464275 PSMD1Q99460 953 aa24.82■■□□□ 1.56
PDLIM2-216ENST00000464275 CSRNP2Q9H175 543 aa24.82■■□□□ 1.56
PDLIM2-216ENST00000464275 HOOK1Q9UJC3 728 aaKnown RBP24.82■■□□□ 1.56
PDLIM2-216ENST00000464275 PDHBP11177 359 aa24.82■■□□□ 1.56
PDLIM2-216ENST00000464275 ASPRV1Q53RT3 343 aa24.82■■□□□ 1.56
PDLIM2-216ENST00000464275 MTERF4Q7Z6M4 381 aaKnown RBP24.82■■□□□ 1.56
PDLIM2-216ENST00000464275 CCDC12Q8WUD4 166 aaPredicted RBP24.82■■□□□ 1.56
PDLIM2-216ENST00000464275 BPIFA3Q9BQP9 254 aa24.82■■□□□ 1.56
PDLIM2-216ENST00000464275 PDCL3Q9H2J4 239 aa24.82■■□□□ 1.56
PDLIM2-216ENST00000464275 UQCRHLA0A096LP55 91 aa24.81■■□□□ 1.56
PDLIM2-216ENST00000464275 YDJCA8MPS7 323 aa24.81■■□□□ 1.56
PDLIM2-216ENST00000464275 USP17L5A8MUK1 530 aa24.81■■□□□ 1.56
PDLIM2-216ENST00000464275 BECN2A8MW95 431 aa24.81■■□□□ 1.56
PDLIM2-216ENST00000464275 M0R2N6 131 aa24.81■■□□□ 1.56
PDLIM2-216ENST00000464275 UQCRHP07919 91 aa24.81■■□□□ 1.56
PDLIM2-216ENST00000464275 ATP2C1P98194 919 aaPredicted RBP24.81■■□□□ 1.56
PDLIM2-216ENST00000464275 GLIPR1L2Q4G1C9 344 aa24.81■■□□□ 1.56
PDLIM2-216ENST00000464275 TYW1BQ6NUM6 668 aa24.81■■□□□ 1.56
PDLIM2-216ENST00000464275 RASGRP2Q7LDG7 609 aa24.81■■□□□ 1.56
PDLIM2-216ENST00000464275 ZFPM1Q8IX07 1006 aa24.81■■□□□ 1.56
PDLIM2-216ENST00000464275 FAM198AQ9UFP1 575 aa24.81■■□□□ 1.56
PDLIM2-216ENST00000464275 A0A087WWV3 80 aa24.8■■□□□ 1.56
PDLIM2-216ENST00000464275 WNT7AO00755 349 aa24.8■■□□□ 1.56
PDLIM2-216ENST00000464275 DHX40Q8IX18 779 aaKnown RBP24.8■■□□□ 1.56
PDLIM2-216ENST00000464275 RIOX1Q9H6W3 641 aa24.8■■□□□ 1.56
PDLIM2-216ENST00000464275 CLIP2Q9UDT6 1046 aa24.8■■□□□ 1.56
PDLIM2-216ENST00000464275 SEC63Q9UGP8 760 aaKnown RBP24.8■■□□□ 1.56
PDLIM2-216ENST00000464275 ADAMTS3O15072 1205 aa24.8■■□□□ 1.56
PDLIM2-216ENST00000464275 SNHG28P0DPA3 235 aa24.8■■□□□ 1.56
PDLIM2-216ENST00000464275 METTL16Q86W50 562 aaKnown RBP24.8■■□□□ 1.56
PDLIM2-216ENST00000464275 PI4KBQ9UBF8 816 aa24.8■■□□□ 1.56
PDLIM2-216ENST00000464275 ARFGEF1Q9Y6D6 1849 aa24.79■■□□□ 1.56
PDLIM2-216ENST00000464275 DPEP1P16444 411 aa24.79■■□□□ 1.56
PDLIM2-216ENST00000464275 CACNB3P54284 484 aa24.79■■□□□ 1.56
PDLIM2-216ENST00000464275 LRRC47Q8N1G4 583 aaKnown RBP24.79■■□□□ 1.56
PDLIM2-216ENST00000464275 PCDHA6Q9UN73 950 aa24.79■■□□□ 1.56
PDLIM2-216ENST00000464275 PCDHA8Q9Y5H6 950 aa24.79■■□□□ 1.56
PDLIM2-216ENST00000464275 CCDC194A0A1B0GVG4 234 aa24.78■■□□□ 1.56
PDLIM2-216ENST00000464275 POLR2DO15514 142 aaKnown RBP24.78■■□□□ 1.56
PDLIM2-216ENST00000464275 KCNA3P22001 575 aa24.78■■□□□ 1.56
PDLIM2-216ENST00000464275 TCP10Q12799 353 aa24.78■■□□□ 1.56
PDLIM2-216ENST00000464275 PTGDRQ13258 359 aa24.78■■□□□ 1.56
PDLIM2-216ENST00000464275 PNOCQ13519 176 aa24.78■■□□□ 1.56
PDLIM2-216ENST00000464275 DPCR1Q3MIW9 517 aa24.78■■□□□ 1.56
PDLIM2-216ENST00000464275 KANK3Q6NY19 840 aa24.78■■□□□ 1.56
PDLIM2-216ENST00000464275 SARM1Q6SZW1 724 aa24.78■■□□□ 1.56
PDLIM2-216ENST00000464275 ZMYND12Q9H0C1 365 aa24.78■■□□□ 1.56
PDLIM2-216ENST00000464275 CPVLQ9H3G5 476 aa24.78■■□□□ 1.56
PDLIM2-216ENST00000464275 DDTLA6NHG4 134 aaPredicted RBP24.78■■□□□ 1.56
PDLIM2-216ENST00000464275 hCG_1984214I3L0E3 225 aa24.78■■□□□ 1.56
PDLIM2-216ENST00000464275 ZNF75DP51815 510 aa24.78■■□□□ 1.56
PDLIM2-216ENST00000464275 CFAP100Q494V2 611 aa24.78■■□□□ 1.56
PDLIM2-216ENST00000464275 PLA2G4DQ86XP0 818 aa24.78■■□□□ 1.56
PDLIM2-216ENST00000464275 FOXP4Q8IVH2 680 aaPredicted RBP24.78■■□□□ 1.56
PDLIM2-216ENST00000464275 ZNF713Q8N859 430 aaPredicted RBP24.78■■□□□ 1.56
PDLIM2-216ENST00000464275 TRIM5Q9C035 493 aa24.78■■□□□ 1.56
PDLIM2-216ENST00000464275 VPS33BQ9H267 617 aa24.78■■□□□ 1.56
PDLIM2-216ENST00000464275 TTC12Q9H892 705 aaPredicted RBP24.78■■□□□ 1.56
PDLIM2-216ENST00000464275 COL2A1P02458 1487 aaPredicted RBP24.78■■□□□ 1.56
PDLIM2-216ENST00000464275 BIN1O00499 593 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms