RNA–Protein interactions for RNA: ENST00000463513.5

GPATCH4-204, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-204ENST00000463513 TMEM67Q5HYA8 995 aa11.76□□□□□ -0.53
GPATCH4-204ENST00000463513 KIAA1755Q5JYT7 1200 aa11.76□□□□□ -0.53
GPATCH4-204ENST00000463513 CYB5R4Q7L1T6 521 aa11.76□□□□□ -0.53
GPATCH4-204ENST00000463513 DGKHQ86XP1 1220 aa11.76□□□□□ -0.53
GPATCH4-204ENST00000463513 ENAHQ8N8S7 591 aaPredicted RBP11.76□□□□□ -0.53
GPATCH4-204ENST00000463513 PNMA1Q8ND90 353 aa11.76□□□□□ -0.53
GPATCH4-204ENST00000463513 CD99L2Q8TCZ2 262 aa11.76□□□□□ -0.53
GPATCH4-204ENST00000463513 DCAF4Q8WV16 495 aa11.76□□□□□ -0.53
GPATCH4-204ENST00000463513 GMCL1Q96IK5 515 aa11.76□□□□□ -0.53
GPATCH4-204ENST00000463513 P2RX7Q99572 595 aaKnown RBP11.76□□□□□ -0.53
GPATCH4-204ENST00000463513 SLF1Q9BQI6 1058 aa11.76□□□□□ -0.53
GPATCH4-204ENST00000463513 TMEM47Q9BQJ4 181 aa11.76□□□□□ -0.53
GPATCH4-204ENST00000463513 HOXC10Q9NYD6 342 aa11.76□□□□□ -0.53
GPATCH4-204ENST00000463513 SPDYE16A6NNV3 312 aaPredicted RBP11.75□□□□□ -0.53
GPATCH4-204ENST00000463513 EPB41L2O43491 1005 aaKnown RBP11.75□□□□□ -0.53
GPATCH4-204ENST00000463513 PRC1O43663 620 aa11.75□□□□□ -0.53
GPATCH4-204ENST00000463513 FMNL1O95466 1100 aaPredicted RBP11.75□□□□□ -0.53
GPATCH4-204ENST00000463513 BCRP11274 1271 aa11.75□□□□□ -0.53
GPATCH4-204ENST00000463513 STAT2P52630 851 aa11.75□□□□□ -0.53
GPATCH4-204ENST00000463513 FCGRTP55899 365 aa11.75□□□□□ -0.53
GPATCH4-204ENST00000463513 CCNA1P78396 465 aa11.75□□□□□ -0.53
GPATCH4-204ENST00000463513 LACTBP83111 547 aaPredicted RBP11.75□□□□□ -0.53
GPATCH4-204ENST00000463513 PLS1Q14651 629 aa11.75□□□□□ -0.53
GPATCH4-204ENST00000463513 WDR78Q5VTH9 848 aa11.75□□□□□ -0.53
GPATCH4-204ENST00000463513 C17orf99Q6UX52 265 aa11.75□□□□□ -0.53
GPATCH4-204ENST00000463513 NFXL1Q6ZNB6 911 aa11.75□□□□□ -0.53
GPATCH4-204ENST00000463513 CHST3Q7LGC8 479 aa11.75□□□□□ -0.53
GPATCH4-204ENST00000463513 MB21D2Q8IYB1 491 aaPredicted RBP11.75□□□□□ -0.53
GPATCH4-204ENST00000463513 GPRC5AQ8NFJ5 357 aa11.75□□□□□ -0.53
GPATCH4-204ENST00000463513 KIFC2Q96AC6 838 aa11.75□□□□□ -0.53
GPATCH4-204ENST00000463513 FEM1BQ9UK73 627 aa11.75□□□□□ -0.53
GPATCH4-204ENST00000463513 MYPNQ86TC9 1320 aa11.75□□□□□ -0.53
GPATCH4-204ENST00000463513 DOCK3Q8IZD9 2030 aa11.75□□□□□ -0.53
GPATCH4-204ENST00000463513 TMEM232C9JQI7 657 aa11.74□□□□□ -0.53
GPATCH4-204ENST00000463513 TNPO2O14787 897 aaKnown RBP11.74□□□□□ -0.53
GPATCH4-204ENST00000463513 HMGB1P09429 215 aaKnown RBP11.74□□□□□ -0.53
GPATCH4-204ENST00000463513 HSPA4P34932 840 aa11.74□□□□□ -0.53
GPATCH4-204ENST00000463513 ERVK-9P63128 1117 aa11.74□□□□□ -0.53
GPATCH4-204ENST00000463513 ERVK-24P63145 666 aa11.74□□□□□ -0.53
GPATCH4-204ENST00000463513 RCSD1Q6JBY9 416 aa11.74□□□□□ -0.53
GPATCH4-204ENST00000463513 KCTD1Q719H9 257 aa11.74□□□□□ -0.53
GPATCH4-204ENST00000463513 CTU1Q7Z7A3 348 aaKnown RBP11.74□□□□□ -0.53
GPATCH4-204ENST00000463513 FAM160B2Q86V87 743 aa11.74□□□□□ -0.53
GPATCH4-204ENST00000463513 MB21D1Q8N884 522 aa11.74□□□□□ -0.53
GPATCH4-204ENST00000463513 NKX2-3Q8TAU0 364 aa11.74□□□□□ -0.53
GPATCH4-204ENST00000463513 CHURC1Q8WUH1 139 aa11.74□□□□□ -0.53
GPATCH4-204ENST00000463513 ATG4CQ96DT6 458 aa11.74□□□□□ -0.53
GPATCH4-204ENST00000463513 JAKMIP1Q96N16 626 aaKnown RBP11.74□□□□□ -0.53
GPATCH4-204ENST00000463513 NEK1Q96PY6 1258 aa11.74□□□□□ -0.53
GPATCH4-204ENST00000463513 EFCC1Q9HA90 598 aa11.74□□□□□ -0.53
GPATCH4-204ENST00000463513 FBXO28Q9NVF7 368 aa11.74□□□□□ -0.53
GPATCH4-204ENST00000463513 PPP1R9AQ9ULJ8 1098 aa11.74□□□□□ -0.53
GPATCH4-204ENST00000463513 RABGAP1Q9Y3P9 1069 aa11.74□□□□□ -0.53
GPATCH4-204ENST00000463513 TRIM17Q9Y577 477 aa11.74□□□□□ -0.53
GPATCH4-204ENST00000463513 FRMPD2Q68DX3 1309 aaPredicted RBP11.74□□□□□ -0.53
GPATCH4-204ENST00000463513 CCDC69A6NI79 296 aa11.73□□□□□ -0.53
GPATCH4-204ENST00000463513 DHX16O60231 1041 aaKnown RBP11.73□□□□□ -0.53
GPATCH4-204ENST00000463513 PSMA5P28066 241 aa11.73□□□□□ -0.53
GPATCH4-204ENST00000463513 DSG3P32926 999 aa11.73□□□□□ -0.53
GPATCH4-204ENST00000463513 PSMC4P43686 418 aa11.73□□□□□ -0.53
GPATCH4-204ENST00000463513 NOVP48745 357 aa11.73□□□□□ -0.53
GPATCH4-204ENST00000463513 BLOC1S2Q6QNY1 142 aa11.73□□□□□ -0.53
GPATCH4-204ENST00000463513 RASGRP2Q7LDG7 609 aa11.73□□□□□ -0.53
GPATCH4-204ENST00000463513 RBBP6Q7Z6E9 1792 aaKnown RBP11.73□□□□□ -0.53
GPATCH4-204ENST00000463513 CATIPQ7Z7H3 387 aa11.73□□□□□ -0.53
GPATCH4-204ENST00000463513 PRPF38AQ8NAV1 312 aaKnown RBP11.73□□□□□ -0.53
GPATCH4-204ENST00000463513 TMEM87BQ96K49 555 aa11.73□□□□□ -0.53
GPATCH4-204ENST00000463513 GPCPD1Q9NPB8 672 aa11.73□□□□□ -0.53
GPATCH4-204ENST00000463513 MORF4L1Q9UBU8 362 aa11.73□□□□□ -0.53
GPATCH4-204ENST00000463513 SNX14Q9Y5W7 946 aa11.73□□□□□ -0.53
GPATCH4-204ENST00000463513 ZBED4O75132 1171 aa11.72□□□□□ -0.53
GPATCH4-204ENST00000463513 PARP1P09874 1014 aaKnown RBP11.72□□□□□ -0.53
GPATCH4-204ENST00000463513 PDHBP11177 359 aa11.72□□□□□ -0.53
GPATCH4-204ENST00000463513 CASTP20810 708 aaKnown RBP11.72□□□□□ -0.53
GPATCH4-204ENST00000463513 HOXD10P28358 340 aa11.72□□□□□ -0.53
GPATCH4-204ENST00000463513 SLC4A3P48751 1232 aa11.72□□□□□ -0.53
GPATCH4-204ENST00000463513 ANTXR2P58335 489 aa11.72□□□□□ -0.53
GPATCH4-204ENST00000463513 GPATCH4Q5T3I0 446 aaKnown RBP11.72□□□□□ -0.53
GPATCH4-204ENST00000463513 LBX2Q6XYB7 198 aa11.72□□□□□ -0.53
GPATCH4-204ENST00000463513 RASEFQ8IZ41 740 aa11.72□□□□□ -0.53
GPATCH4-204ENST00000463513 COA7Q96BR5 231 aa11.72□□□□□ -0.53
GPATCH4-204ENST00000463513 USP26Q9BXU7 913 aa11.72□□□□□ -0.53
GPATCH4-204ENST00000463513 LRRC2Q9BYS8 371 aa11.72□□□□□ -0.53
GPATCH4-204ENST00000463513 UPF2Q9HAU5 1272 aaKnown RBP11.72□□□□□ -0.53
GPATCH4-204ENST00000463513 TXNRD2Q9NNW7 524 aa11.72□□□□□ -0.53
GPATCH4-204ENST00000463513 NAP1L2Q9ULW6 460 aaPredicted RBP11.72□□□□□ -0.53
GPATCH4-204ENST00000463513 IVNS1ABPQ9Y6Y0 642 aa11.72□□□□□ -0.53
GPATCH4-204ENST00000463513 BAZ2BQ9UIF8 2168 aaKnown RBP11.72□□□□□ -0.53
GPATCH4-204ENST00000463513 HTTP42858 3142 aa11.71□□□□□ -0.53
GPATCH4-204ENST00000463513 WDR19Q8NEZ3 1342 aa11.71□□□□□ -0.53
GPATCH4-204ENST00000463513 ZNFX1Q9P2E3 1918 aaKnown RBP11.71□□□□□ -0.53
GPATCH4-204ENST00000463513 VWA5AO00534 786 aa11.71□□□□□ -0.53
GPATCH4-204ENST00000463513 SH2B2O14492 632 aaPredicted RBP11.71□□□□□ -0.53
GPATCH4-204ENST00000463513 PEX10O60683 326 aa11.71□□□□□ -0.53
GPATCH4-204ENST00000463513 GNRH1P01148 92 aa11.71□□□□□ -0.53
GPATCH4-204ENST00000463513 MAPK4P31152 587 aa11.71□□□□□ -0.53
GPATCH4-204ENST00000463513 ZNF543Q08ER8 600 aa11.71□□□□□ -0.53
GPATCH4-204ENST00000463513 SEC23AQ15436 765 aa11.71□□□□□ -0.53
GPATCH4-204ENST00000463513 ADCK5Q3MIX3 580 aa11.71□□□□□ -0.53
GPATCH4-204ENST00000463513 TSGA10IPQ3SY00 556 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms