RNA–Protein interactions for RNA: ENST00000463470.1

VPS72-203, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 1 (best)

Gene VPS72, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-203ENST00000463470 SPECC1LQ69YQ0 1117 aa5.34□□□□□ -1.55
VPS72-203ENST00000463470 OTUD7BQ6GQQ9 843 aa5.34□□□□□ -1.55
VPS72-203ENST00000463470 C15orf52Q6ZUT6 534 aaKnown RBP5.34□□□□□ -1.55
VPS72-203ENST00000463470 NBPF11Q86T75 865 aa5.34□□□□□ -1.55
VPS72-203ENST00000463470 PPFIBP1Q86W92 1011 aa5.34□□□□□ -1.55
VPS72-203ENST00000463470 HOMER1Q86YM7 354 aa5.34□□□□□ -1.55
VPS72-203ENST00000463470 POTEDQ86YR6 584 aa5.34□□□□□ -1.55
VPS72-203ENST00000463470 CCDC144CPQ8IYA2 1237 aa5.34□□□□□ -1.55
VPS72-203ENST00000463470 LCORLQ8N3X6 602 aa5.34□□□□□ -1.55
VPS72-203ENST00000463470 TTLL6Q8N841 843 aa5.34□□□□□ -1.55
VPS72-203ENST00000463470 ZNF713Q8N859 430 aaPredicted RBP5.34□□□□□ -1.55
VPS72-203ENST00000463470 FBXO22Q8NEZ5 403 aa5.34□□□□□ -1.55
VPS72-203ENST00000463470 ZNF397Q8NF99 534 aaPredicted RBP5.34□□□□□ -1.55
VPS72-203ENST00000463470 SPATA20Q8TB22 786 aa5.34□□□□□ -1.55
VPS72-203ENST00000463470 NOC3LQ8WTT2 800 aaKnown RBP5.34□□□□□ -1.55
VPS72-203ENST00000463470 NUP133Q8WUM0 1156 aa5.34□□□□□ -1.55
VPS72-203ENST00000463470 PHKBQ93100 1093 aa5.34□□□□□ -1.55
VPS72-203ENST00000463470 SETDB2Q96T68 719 aa5.34□□□□□ -1.55
VPS72-203ENST00000463470 RIOK1Q9BRS2 568 aaKnown RBP5.34□□□□□ -1.55
VPS72-203ENST00000463470 PHF20Q9BVI0 1012 aa5.34□□□□□ -1.55
VPS72-203ENST00000463470 FTOQ9C0B1 505 aaKnown RBP eCLIP5.34□□□□□ -1.553e-6■■■□□ 16.5
VPS72-203ENST00000463470 CUEDC2Q9H467 287 aa5.34□□□□□ -1.55
VPS72-203ENST00000463470 GPHNQ9NQX3 736 aaPredicted RBP5.34□□□□□ -1.55
VPS72-203ENST00000463470 TCP11L1Q9NUJ3 509 aa5.34□□□□□ -1.55
VPS72-203ENST00000463470 RNF181Q9P0P0 153 aa5.34□□□□□ -1.55
VPS72-203ENST00000463470 ABCF2Q9UG63 623 aa5.34□□□□□ -1.55
VPS72-203ENST00000463470 NRBP1Q9UHY1 535 aa5.34□□□□□ -1.55
VPS72-203ENST00000463470 FBXO2Q9UK22 296 aaPredicted RBP5.34□□□□□ -1.55
VPS72-203ENST00000463470 PCDHA5Q9Y5H7 936 aa5.34□□□□□ -1.55
VPS72-203ENST00000463470 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.34□□□□□ -1.553e-9■■□□□ 12.7
VPS72-203ENST00000463470 ARFGEF1Q9Y6D6 1849 aa5.34□□□□□ -1.55
VPS72-203ENST00000463470 SCN7AQ01118 1682 aa5.34□□□□□ -1.56
VPS72-203ENST00000463470 ITIH6Q6UXX5 1313 aa5.33□□□□□ -1.56
VPS72-203ENST00000463470 MINDY4BA8MYZ0 360 aa5.33□□□□□ -1.56
VPS72-203ENST00000463470 POTEB2H3BUK9 544 aa5.33□□□□□ -1.56
VPS72-203ENST00000463470 POLR2DO15514 142 aaKnown RBP5.33□□□□□ -1.56
VPS72-203ENST00000463470 ZNF18P17022 549 aa5.33□□□□□ -1.56
VPS72-203ENST00000463470 LMOD1P29536 600 aaPredicted RBP5.33□□□□□ -1.56
VPS72-203ENST00000463470 LONP1P36776 959 aaKnown RBP5.33□□□□□ -1.56
VPS72-203ENST00000463470 MLLT3P42568 568 aaPredicted RBP5.33□□□□□ -1.56
VPS72-203ENST00000463470 PPP4CP60510 307 aa5.33□□□□□ -1.56
VPS72-203ENST00000463470 MDM2Q00987 491 aaPredicted RBP5.33□□□□□ -1.56
VPS72-203ENST00000463470 GABPB1Q06547 395 aaPredicted RBP5.33□□□□□ -1.56
VPS72-203ENST00000463470 STIM1Q13586 685 aa5.33□□□□□ -1.56
VPS72-203ENST00000463470 LONRF3Q496Y0 759 aa5.33□□□□□ -1.56
VPS72-203ENST00000463470 UTP14CQ5TAP6 766 aaKnown RBP5.33□□□□□ -1.56
VPS72-203ENST00000463470 STYK1Q6J9G0 422 aa5.33□□□□□ -1.56
VPS72-203ENST00000463470 TMTC3Q6ZXV5 915 aa5.33□□□□□ -1.56
VPS72-203ENST00000463470 TMC4Q7Z404 712 aa5.33□□□□□ -1.56
VPS72-203ENST00000463470 METTL16Q86W50 562 aaKnown RBP5.33□□□□□ -1.56
VPS72-203ENST00000463470 NBPF5PQ86XG9 351 aaPredicted RBP5.33□□□□□ -1.56
VPS72-203ENST00000463470 C2CD5Q86YS7 1000 aa5.33□□□□□ -1.56
VPS72-203ENST00000463470 CNGA4Q8IV77 575 aa5.33□□□□□ -1.56
VPS72-203ENST00000463470 SYNE4Q8N205 404 aa5.33□□□□□ -1.56
VPS72-203ENST00000463470 HELBQ8NG08 1087 aaPredicted RBP5.33□□□□□ -1.56
VPS72-203ENST00000463470 DDX27Q96GQ7 796 aaKnown RBP5.33□□□□□ -1.56
VPS72-203ENST00000463470 PANX2Q96RD6 677 aa5.33□□□□□ -1.56
VPS72-203ENST00000463470 BAG1Q99933 345 aaPredicted RBP5.33□□□□□ -1.56
VPS72-203ENST00000463470 LRRC27Q9C0I9 530 aa5.33□□□□□ -1.56
VPS72-203ENST00000463470 TMX1Q9H3N1 280 aa5.33□□□□□ -1.56
VPS72-203ENST00000463470 CABP5Q9NP86 173 aa5.33□□□□□ -1.56
VPS72-203ENST00000463470 SEC31BQ9NQW1 1179 aa5.33□□□□□ -1.56
VPS72-203ENST00000463470 MYO1AQ9UBC5 1043 aa5.33□□□□□ -1.56
VPS72-203ENST00000463470 DNAI1Q9UI46 699 aa5.33□□□□□ -1.56
VPS72-203ENST00000463470 MINPP1Q9UNW1 487 aa5.33□□□□□ -1.56
VPS72-203ENST00000463470 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.33□□□□□ -1.56
VPS72-203ENST00000463470 NFE2L3Q9Y4A8 694 aa5.33□□□□□ -1.56
VPS72-203ENST00000463470 DUOX1Q9NRD9 1551 aa5.33□□□□□ -1.56
VPS72-203ENST00000463470 DLEC1Q9Y238 1755 aa5.32□□□□□ -1.56
VPS72-203ENST00000463470 MROH7-TTC4A0A0A0MT08 1334 aa5.32□□□□□ -1.56
VPS72-203ENST00000463470 A0A1B0GTH6 734 aa5.32□□□□□ -1.56
VPS72-203ENST00000463470 LRRC10BA6NIK2 292 aa5.32□□□□□ -1.56
VPS72-203ENST00000463470 TSPY2A6NKD2 308 aa5.32□□□□□ -1.56
VPS72-203ENST00000463470 EFCAB8A8MWE9 144 aa5.32□□□□□ -1.56
VPS72-203ENST00000463470 AKR1B15C9JRZ8 316 aaPredicted RBP5.32□□□□□ -1.56
VPS72-203ENST00000463470 H0YIN7 160 aa5.32□□□□□ -1.56
VPS72-203ENST00000463470 H7C1D1 291 aa5.32□□□□□ -1.56
VPS72-203ENST00000463470 BIN1O00499 593 aa5.32□□□□□ -1.56
VPS72-203ENST00000463470 SLC26A4O43511 780 aa5.32□□□□□ -1.56
VPS72-203ENST00000463470 PRKAB2O43741 272 aa5.32□□□□□ -1.56
VPS72-203ENST00000463470 CCDC175P0C221 793 aa5.32□□□□□ -1.56
VPS72-203ENST00000463470 SCG2P13521 617 aa5.32□□□□□ -1.56
VPS72-203ENST00000463470 GNA11P29992 359 aa5.32□□□□□ -1.56
VPS72-203ENST00000463470 PDE6BP35913 854 aa5.32□□□□□ -1.56
VPS72-203ENST00000463470 PRPHP41219 470 aa5.32□□□□□ -1.56
VPS72-203ENST00000463470 TOB1P50616 345 aaPredicted RBP5.32□□□□□ -1.56
VPS72-203ENST00000463470 NLRP5P59047 1200 aa5.32□□□□□ -1.56
VPS72-203ENST00000463470 ATP2C1P98194 919 aaPredicted RBP5.32□□□□□ -1.56
VPS72-203ENST00000463470 AMPD3Q01432 767 aa5.32□□□□□ -1.56
VPS72-203ENST00000463470 FUT2Q10981 343 aa5.32□□□□□ -1.56
VPS72-203ENST00000463470 TROAPQ12815 778 aa5.32□□□□□ -1.56
VPS72-203ENST00000463470 MKRN3Q13064 507 aaKnown RBP5.32□□□□□ -1.56
VPS72-203ENST00000463470 TBX2Q13207 712 aaPredicted RBP5.32□□□□□ -1.56
VPS72-203ENST00000463470 PNOCQ13519 176 aa5.32□□□□□ -1.56
VPS72-203ENST00000463470 BMS1Q14692 1282 aaKnown RBP5.32□□□□□ -1.56
VPS72-203ENST00000463470 PFKFB3Q16875 520 aaPredicted RBP5.32□□□□□ -1.56
VPS72-203ENST00000463470 TSR1Q2NL82 804 aaKnown RBP5.32□□□□□ -1.56
VPS72-203ENST00000463470 CRY2Q49AN0 593 aa5.32□□□□□ -1.56
VPS72-203ENST00000463470 TTC38Q5R3I4 469 aa5.32□□□□□ -1.56
VPS72-203ENST00000463470 TAF3Q5VWG9 929 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms