RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 MROH7-TTC4A0A0A0MT08 1334 aa16.67■□□□□ 0.26
C9orf3-211ENST00000463372 SIPA1L1O43166 1804 aa16.66■□□□□ 0.26
C9orf3-211ENST00000463372 SPDYE16A6NNV3 312 aaPredicted RBP16.66■□□□□ 0.26
C9orf3-211ENST00000463372 GDF11O95390 407 aa16.66■□□□□ 0.26
C9orf3-211ENST00000463372 ERCC3P19447 782 aa16.66■□□□□ 0.26
C9orf3-211ENST00000463372 RHBDL3P58872 404 aa16.66■□□□□ 0.26
C9orf3-211ENST00000463372 JAG1P78504 1218 aa16.66■□□□□ 0.26
C9orf3-211ENST00000463372 BEND3Q5T5X7 828 aa16.66■□□□□ 0.26
C9orf3-211ENST00000463372 ABRAQ8N0Z2 381 aa16.66■□□□□ 0.26
C9orf3-211ENST00000463372 SHCBP1Q8NEM2 672 aa16.66■□□□□ 0.26
C9orf3-211ENST00000463372 KLHDC9Q8NEP7 349 aa16.66■□□□□ 0.26
C9orf3-211ENST00000463372 C12orf42Q96LP6 360 aa16.66■□□□□ 0.26
C9orf3-211ENST00000463372 UMODL1Q5DID0 1318 aa16.66■□□□□ 0.26
C9orf3-211ENST00000463372 GVINP1Q7Z2Y8 2422 aa16.66■□□□□ 0.26
C9orf3-211ENST00000463372 CD4P01730 458 aa16.65■□□□□ 0.26
C9orf3-211ENST00000463372 CCSAPQ6IQ19 270 aaPredicted RBP16.65■□□□□ 0.26
C9orf3-211ENST00000463372 SLC9A7Q96T83 725 aa16.65■□□□□ 0.26
C9orf3-211ENST00000463372 ABCF2Q9UG63 623 aa16.65■□□□□ 0.26
C9orf3-211ENST00000463372 MUTYHQ9UIF7 546 aa16.65■□□□□ 0.26
C9orf3-211ENST00000463372 TRPC6Q9Y210 931 aa16.65■□□□□ 0.26
C9orf3-211ENST00000463372 ACACBO00763 2458 aa16.65■□□□□ 0.26
C9orf3-211ENST00000463372 NCOR2Q9Y618 2525 aa16.64■□□□□ 0.25
C9orf3-211ENST00000463372 GPR75-ASB3A0A0A6YYF3 556 aa16.64■□□□□ 0.25
C9orf3-211ENST00000463372 SOWAHBA6NEL2 793 aa16.64■□□□□ 0.25
C9orf3-211ENST00000463372 C19orf67A6NJJ6 358 aa16.64■□□□□ 0.25
C9orf3-211ENST00000463372 SEMA3EO15041 775 aa16.64■□□□□ 0.25
C9orf3-211ENST00000463372 MAP4K4O95819 1239 aaPredicted RBP16.64■□□□□ 0.25
C9orf3-211ENST00000463372 ASGR1P07306 291 aa16.64■□□□□ 0.25
C9orf3-211ENST00000463372 TAL1P17542 331 aaPredicted RBP16.64■□□□□ 0.25
C9orf3-211ENST00000463372 USP14P54578 494 aa16.64■□□□□ 0.25
C9orf3-211ENST00000463372 HERC4Q5GLZ8 1057 aaPredicted RBP16.64■□□□□ 0.25
C9orf3-211ENST00000463372 ASCL5Q7RTU5 278 aa16.64■□□□□ 0.25
C9orf3-211ENST00000463372 CRACR2BQ8N4Y2 399 aaPredicted RBP16.64■□□□□ 0.25
C9orf3-211ENST00000463372 GDPD5Q8WTR4 605 aa16.64■□□□□ 0.25
C9orf3-211ENST00000463372 TINF2Q9BSI4 451 aa16.64■□□□□ 0.25
C9orf3-211ENST00000463372 SPATC1LQ9H0A9 340 aa16.64■□□□□ 0.25
C9orf3-211ENST00000463372 MROH8Q9H579 483 aa16.64■□□□□ 0.25
C9orf3-211ENST00000463372 CNPY2Q9Y2B0 182 aa16.64■□□□□ 0.25
C9orf3-211ENST00000463372 CHD6Q8TD26 2715 aa16.63■□□□□ 0.25
C9orf3-211ENST00000463372 MED19A0JLT2 244 aaPredicted RBP16.63■□□□□ 0.25
C9orf3-211ENST00000463372 ARHGEF15O94989 841 aa16.63■□□□□ 0.25
C9orf3-211ENST00000463372 PFKMP08237 780 aa16.63■□□□□ 0.25
C9orf3-211ENST00000463372 ZNF865P0CJ78 1059 aaPredicted RBP16.63■□□□□ 0.25
C9orf3-211ENST00000463372 FCER1AP12319 257 aa16.63■□□□□ 0.25
C9orf3-211ENST00000463372 VCAM1P19320 739 aa16.63■□□□□ 0.25
C9orf3-211ENST00000463372 IRS1P35568 1242 aa16.63■□□□□ 0.25
C9orf3-211ENST00000463372 TTLL4Q14679 1199 aa16.63■□□□□ 0.25
C9orf3-211ENST00000463372 SHROOM1Q2M3G4 852 aaPredicted RBP16.63■□□□□ 0.25
C9orf3-211ENST00000463372 SPTY2D1Q68D10 685 aaPredicted RBP16.63■□□□□ 0.25
C9orf3-211ENST00000463372 NCAPG2Q86XI2 1143 aa16.63■□□□□ 0.25
C9orf3-211ENST00000463372 ADHFE1Q8IWW8 467 aa16.63■□□□□ 0.25
C9orf3-211ENST00000463372 EDAQ92838 391 aa16.63■□□□□ 0.25
C9orf3-211ENST00000463372 DHX36Q9H2U1 1008 aaKnown RBP16.63■□□□□ 0.25
C9orf3-211ENST00000463372 VPS13AQ96RL7 3174 aa16.63■□□□□ 0.25
C9orf3-211ENST00000463372 SCN5AQ14524 2016 aa16.63■□□□□ 0.25
C9orf3-211ENST00000463372 WDR87Q6ZQQ6 2873 aa16.63■□□□□ 0.25
C9orf3-211ENST00000463372 TMEM221A6NGB7 291 aa16.62■□□□□ 0.25
C9orf3-211ENST00000463372 PROB1E7EW31 1015 aa16.62■□□□□ 0.25
C9orf3-211ENST00000463372 F6X3S4 739 aa16.62■□□□□ 0.25
C9orf3-211ENST00000463372 M0R296 226 aa16.62■□□□□ 0.25
C9orf3-211ENST00000463372 C6orf222P0C671 652 aaPredicted RBP16.62■□□□□ 0.25
C9orf3-211ENST00000463372 ACTN1P12814 892 aa16.62■□□□□ 0.25
C9orf3-211ENST00000463372 TWISTNBQ3B726 338 aaPredicted RBP16.62■□□□□ 0.25
C9orf3-211ENST00000463372 PHOSPHO2Q8TCD6 241 aa16.62■□□□□ 0.25
C9orf3-211ENST00000463372 SUCLG2Q96I99 432 aa16.62■□□□□ 0.25
C9orf3-211ENST00000463372 WNT8AQ9H1J5 351 aa16.62■□□□□ 0.25
C9orf3-211ENST00000463372 SPC25Q9HBM1 224 aa16.62■□□□□ 0.25
C9orf3-211ENST00000463372 FAM184BQ9ULE4 1060 aa16.62■□□□□ 0.25
C9orf3-211ENST00000463372 CFAP47Q6ZTR5 3102 aa16.62■□□□□ 0.25
C9orf3-211ENST00000463372 COL4A6Q14031 1691 aa16.62■□□□□ 0.25
C9orf3-211ENST00000463372 MYADML2A6NDP7 307 aa16.61■□□□□ 0.25
C9orf3-211ENST00000463372 H3BQ06 376 aaPredicted RBP16.61■□□□□ 0.25
C9orf3-211ENST00000463372 CST5P28325 142 aaPredicted RBP16.61■□□□□ 0.25
C9orf3-211ENST00000463372 PLS1Q14651 629 aa16.61■□□□□ 0.25
C9orf3-211ENST00000463372 NEK9Q8TD19 979 aa16.61■□□□□ 0.25
C9orf3-211ENST00000463372 CDCA7LQ96GN5 454 aa16.61■□□□□ 0.25
C9orf3-211ENST00000463372 CNTNAP3BQ96NU0 1288 aa16.61■□□□□ 0.25
C9orf3-211ENST00000463372 NOC4LQ9BVI4 516 aaKnown RBP16.61■□□□□ 0.25
C9orf3-211ENST00000463372 CNTNAP3Q9BZ76 1288 aa16.61■□□□□ 0.25
C9orf3-211ENST00000463372 RPAP3Q9H6T3 665 aaPredicted RBP16.61■□□□□ 0.25
C9orf3-211ENST00000463372 HOXC10Q9NYD6 342 aa16.61■□□□□ 0.25
C9orf3-211ENST00000463372 PRR23AA6NEV1 266 aa16.6■□□□□ 0.25
C9orf3-211ENST00000463372 TRIM67Q6ZTA4 783 aa16.6■□□□□ 0.25
C9orf3-211ENST00000463372 FOXP4Q8IVH2 680 aaPredicted RBP16.6■□□□□ 0.25
C9orf3-211ENST00000463372 HERC6Q8IVU3 1022 aa16.6■□□□□ 0.25
C9orf3-211ENST00000463372 FBXL6Q8N531 539 aa16.6■□□□□ 0.25
C9orf3-211ENST00000463372 COL26A1Q96A83 441 aa16.6■□□□□ 0.25
C9orf3-211ENST00000463372 SCLYQ96I15 445 aa16.6■□□□□ 0.25
C9orf3-211ENST00000463372 POP1Q99575 1024 aaKnown RBP16.6■□□□□ 0.25
C9orf3-211ENST00000463372 SIP14410 1827 aa16.6■□□□□ 0.25
C9orf3-211ENST00000463372 COL11A1P12107 1806 aaPredicted RBP16.59■□□□□ 0.25
C9orf3-211ENST00000463372 DUSP11O75319 330 aaKnown RBP16.59■□□□□ 0.25
C9orf3-211ENST00000463372 WDR43Q15061 677 aaKnown RBP eCLIP16.59■□□□□ 0.25
C9orf3-211ENST00000463372 SPRED2Q7Z698 418 aa16.59■□□□□ 0.25
C9orf3-211ENST00000463372 TEX11Q8IYF3 940 aa16.59■□□□□ 0.25
C9orf3-211ENST00000463372 KLHDC4Q8TBB5 520 aa16.59■□□□□ 0.25
C9orf3-211ENST00000463372 KAZALD1Q96I82 304 aa16.59■□□□□ 0.25
C9orf3-211ENST00000463372 BICC1Q9H694 974 aaKnown RBP16.59■□□□□ 0.25
C9orf3-211ENST00000463372 DMXL1Q9Y485 3027 aa16.59■□□□□ 0.25
C9orf3-211ENST00000463372 H0Y858 1186 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms