RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 CCDC74BQ96LY2 380 aa6.86□□□□□ -1.31
USH2A-203ENST00000463147 KREMEN1Q96MU8 473 aa6.86□□□□□ -1.31
USH2A-203ENST00000463147 TEPSINQ96N21 525 aa6.86□□□□□ -1.31
USH2A-203ENST00000463147 ZMYM5Q9UJ78 669 aa6.86□□□□□ -1.31
USH2A-203ENST00000463147 AK5Q9Y6K8 562 aa6.86□□□□□ -1.31
USH2A-203ENST00000463147 LOC105371045A0A1W2PR82 267 aa6.85□□□□□ -1.31
USH2A-203ENST00000463147 ZC3H12DA2A288 527 aaKnown RBP6.85□□□□□ -1.31
USH2A-203ENST00000463147 OTOL1A6NHN0 477 aaPredicted RBP6.85□□□□□ -1.31
USH2A-203ENST00000463147 SLC22A31A6NKX4 558 aa6.85□□□□□ -1.31
USH2A-203ENST00000463147 E9PSI1 815 aa6.85□□□□□ -1.31
USH2A-203ENST00000463147 PNLIPP16233 465 aa6.85□□□□□ -1.31
USH2A-203ENST00000463147 SSU72P8A0A1W2PR75 194 aa6.84□□□□□ -1.31
USH2A-203ENST00000463147 TFE3P19532 575 aaPredicted RBP6.84□□□□□ -1.31
USH2A-203ENST00000463147 RPL10P27635 214 aaKnown RBP6.84□□□□□ -1.31
USH2A-203ENST00000463147 YBX1P67809 324 aaKnown RBP6.84□□□□□ -1.31
USH2A-203ENST00000463147 SPATS1Q496A3 300 aa6.84□□□□□ -1.31
USH2A-203ENST00000463147 SYTL5Q8TDW5 730 aaPredicted RBP6.84□□□□□ -1.31
USH2A-203ENST00000463147 JARID2Q92833 1246 aaPredicted RBP6.84□□□□□ -1.31
USH2A-203ENST00000463147 G6PC3Q9BUM1 346 aa6.84□□□□□ -1.31
USH2A-203ENST00000463147 NOC4LQ9BVI4 516 aaKnown RBP6.84□□□□□ -1.31
USH2A-203ENST00000463147 LUC7LQ9NQ29 371 aaKnown RBP6.84□□□□□ -1.31
USH2A-203ENST00000463147 EBF1Q9UH73 591 aa6.84□□□□□ -1.31
USH2A-203ENST00000463147 IRS4O14654 1257 aaPredicted RBP6.83□□□□□ -1.32
USH2A-203ENST00000463147 LRRN2O75325 713 aa6.83□□□□□ -1.32
USH2A-203ENST00000463147 PRPF40AO75400 957 aaKnown RBP6.83□□□□□ -1.32
USH2A-203ENST00000463147 ENDOUP21128 410 aaKnown RBP6.83□□□□□ -1.32
USH2A-203ENST00000463147 PCBP3P57721 371 aaKnown RBP6.83□□□□□ -1.32
USH2A-203ENST00000463147 RNF4P78317 190 aa6.83□□□□□ -1.32
USH2A-203ENST00000463147 MAP3K11Q16584 847 aa6.83□□□□□ -1.32
USH2A-203ENST00000463147 CNKSR3Q6P9H4 555 aa6.83□□□□□ -1.32
USH2A-203ENST00000463147 DNAJC14Q6Y2X3 702 aaPredicted RBP6.83□□□□□ -1.32
USH2A-203ENST00000463147 DAGLBQ8NCG7 672 aa6.83□□□□□ -1.32
USH2A-203ENST00000463147 MAP6Q96JE9 813 aa6.83□□□□□ -1.32
USH2A-203ENST00000463147 UPK3BL1B0FP48 263 aa6.82□□□□□ -1.32
USH2A-203ENST00000463147 UPK3BL2E5RIL1 263 aa6.82□□□□□ -1.32
USH2A-203ENST00000463147 MPOP05164 745 aa6.82□□□□□ -1.32
USH2A-203ENST00000463147 P4HBP07237 508 aaKnown RBP6.82□□□□□ -1.32
USH2A-203ENST00000463147 VIPR1P32241 457 aa6.82□□□□□ -1.32
USH2A-203ENST00000463147 ARL4AP40617 200 aa6.82□□□□□ -1.32
USH2A-203ENST00000463147 NMIQ13287 307 aaPredicted RBP6.82□□□□□ -1.32
USH2A-203ENST00000463147 CEP128Q6ZU80 1094 aa6.82□□□□□ -1.32
USH2A-203ENST00000463147 WAPLQ7Z5K2 1190 aa6.82□□□□□ -1.32
USH2A-203ENST00000463147 SIRT2Q8IXJ6 389 aa6.82□□□□□ -1.32
USH2A-203ENST00000463147 PANK1Q8TE04 598 aa6.82□□□□□ -1.32
USH2A-203ENST00000463147 CNTD2Q9H8S5 307 aa6.82□□□□□ -1.32
USH2A-203ENST00000463147 PRR36Q9H6K5 1346 aa6.81□□□□□ -1.32
USH2A-203ENST00000463147 NOTOA8MTQ0 251 aa6.81□□□□□ -1.32
USH2A-203ENST00000463147 ERVFRD-1P60508 538 aa6.81□□□□□ -1.32
USH2A-203ENST00000463147 NFKB2Q00653 900 aa6.81□□□□□ -1.32
USH2A-203ENST00000463147 LAPTM5Q13571 262 aa6.81□□□□□ -1.32
USH2A-203ENST00000463147 MLECQ14165 292 aa6.81□□□□□ -1.32
USH2A-203ENST00000463147 FRMD5Q7Z6J6 570 aa6.81□□□□□ -1.32
USH2A-203ENST00000463147 ZNF655Q8N720 491 aaPredicted RBP6.81□□□□□ -1.32
USH2A-203ENST00000463147 LINC01356Q8N9X3 169 aa6.81□□□□□ -1.32
USH2A-203ENST00000463147 MZB1Q8WU39 189 aa6.81□□□□□ -1.32
USH2A-203ENST00000463147 CNOT11Q9UKZ1 510 aaKnown RBP6.81□□□□□ -1.32
USH2A-203ENST00000463147 CORINQ9Y5Q5 1042 aa6.81□□□□□ -1.32
USH2A-203ENST00000463147 SHISA3A0PJX4 238 aa6.8□□□□□ -1.32
USH2A-203ENST00000463147 CILPO75339 1184 aa6.8□□□□□ -1.32
USH2A-203ENST00000463147 USP2O75604 605 aaPredicted RBP6.8□□□□□ -1.32
USH2A-203ENST00000463147 ST13P50502 369 aaKnown RBP6.8□□□□□ -1.32
USH2A-203ENST00000463147 CAP1Q01518 475 aa6.8□□□□□ -1.32
USH2A-203ENST00000463147 ZXDCQ2QGD7 858 aaPredicted RBP6.8□□□□□ -1.32
USH2A-203ENST00000463147 GALNT18Q6P9A2 607 aa6.8□□□□□ -1.32
USH2A-203ENST00000463147 PHACTR4Q8IZ21 702 aa6.8□□□□□ -1.32
USH2A-203ENST00000463147 FEZF2Q8TBJ5 459 aa6.8□□□□□ -1.32
USH2A-203ENST00000463147 TNFRSF10DQ9UBN6 386 aa6.8□□□□□ -1.32
USH2A-203ENST00000463147 GBP1P32455 592 aa6.79□□□□□ -1.32
USH2A-203ENST00000463147 GALK1P51570 392 aa6.79□□□□□ -1.32
USH2A-203ENST00000463147 EPHB3P54753 998 aa6.79□□□□□ -1.32
USH2A-203ENST00000463147 GGNQ86UU5 652 aa6.79□□□□□ -1.32
USH2A-203ENST00000463147 FAM129CQ86XR2 697 aa6.79□□□□□ -1.32
USH2A-203ENST00000463147 NLGN1Q8N2Q7 840 aa6.79□□□□□ -1.32
USH2A-203ENST00000463147 USHBP1Q8N6Y0 703 aa6.79□□□□□ -1.32
USH2A-203ENST00000463147 LINC00116Q8NCU8 138 aa6.79□□□□□ -1.32
USH2A-203ENST00000463147 GATAD2BQ8WXI9 593 aa6.79□□□□□ -1.32
USH2A-203ENST00000463147 HDAC8Q9BY41 377 aa6.79□□□□□ -1.32
USH2A-203ENST00000463147 TCFL5Q9UL49 500 aa6.79□□□□□ -1.32
USH2A-203ENST00000463147 WTIPA6NIX2 430 aaPredicted RBP6.78□□□□□ -1.32
USH2A-203ENST00000463147 RBAK-RBAKDNI3L0D1 243 aa6.78□□□□□ -1.32
USH2A-203ENST00000463147 RTP1P59025 263 aa6.78□□□□□ -1.32
USH2A-203ENST00000463147 LMNB2Q03252 620 aa6.78□□□□□ -1.32
USH2A-203ENST00000463147 TCTN2Q96GX1 697 aa6.78□□□□□ -1.32
USH2A-203ENST00000463147 IGSF5Q9NSI5 407 aa6.78□□□□□ -1.32
USH2A-203ENST00000463147 KIAA1522Q9P206 1035 aaPredicted RBP6.78□□□□□ -1.32
USH2A-203ENST00000463147 REV1Q9UBZ9 1251 aa6.78□□□□□ -1.32
USH2A-203ENST00000463147 CDR1P51861 262 aa6.77□□□□□ -1.33
USH2A-203ENST00000463147 PLP2Q04941 152 aa6.77□□□□□ -1.33
USH2A-203ENST00000463147 EFEMP1Q12805 493 aa6.77□□□□□ -1.33
USH2A-203ENST00000463147 TAF1CQ15572 869 aaPredicted RBP6.77□□□□□ -1.33
USH2A-203ENST00000463147 ZDHHC14Q8IZN3 488 aa6.77□□□□□ -1.33
USH2A-203ENST00000463147 PHC3Q8NDX5 983 aa6.77□□□□□ -1.33
USH2A-203ENST00000463147 VWCEQ96DN2 955 aa6.77□□□□□ -1.33
USH2A-203ENST00000463147 FCRL2Q96LA5 508 aaPredicted RBP6.77□□□□□ -1.33
USH2A-203ENST00000463147 FOXP3Q9BZS1 431 aa6.77□□□□□ -1.33
USH2A-203ENST00000463147 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.77□□□□□ -1.33
USH2A-203ENST00000463147 TMPRSS5Q9H3S3 457 aa6.77□□□□□ -1.33
USH2A-203ENST00000463147 EPB41L4AQ9HCS5 686 aaPredicted RBP6.77□□□□□ -1.33
USH2A-203ENST00000463147 KLHL3Q9UH77 587 aa6.77□□□□□ -1.33
USH2A-203ENST00000463147 FAM221AA4D161 298 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms