RNA–Protein interactions for RNA: ENST00000463066.1

HLA-DPA1-245, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 580 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-245ENST00000463066 ISY1Q9ULR0 285 aaKnown RBP19.62■□□□□ 0.73
HLA-DPA1-245ENST00000463066 GTF3C3Q9Y5Q9 886 aa19.62■□□□□ 0.73
HLA-DPA1-245ENST00000463066 TRDNQ13061 729 aa19.61■□□□□ 0.73
HLA-DPA1-245ENST00000463066 KCTD1Q719H9 257 aa19.61■□□□□ 0.73
HLA-DPA1-245ENST00000463066 TNS4Q8IZW8 715 aa19.61■□□□□ 0.73
HLA-DPA1-245ENST00000463066 NCOA7Q8NI08 942 aa19.61■□□□□ 0.73
HLA-DPA1-245ENST00000463066 PORCNQ9H237 461 aa19.61■□□□□ 0.73
HLA-DPA1-245ENST00000463066 SYNPO2Q9UMS6 1093 aa19.61■□□□□ 0.73
HLA-DPA1-245ENST00000463066 FMNL1O95466 1100 aaPredicted RBP19.6■□□□□ 0.73
HLA-DPA1-245ENST00000463066 BMP3P12645 472 aa19.6■□□□□ 0.73
HLA-DPA1-245ENST00000463066 ERVK-9P63128 1117 aa19.6■□□□□ 0.73
HLA-DPA1-245ENST00000463066 ERVK-24P63145 666 aa19.6■□□□□ 0.73
HLA-DPA1-245ENST00000463066 SEC23AQ15436 765 aa19.6■□□□□ 0.73
HLA-DPA1-245ENST00000463066 PPP4R3BQ5MIZ7 849 aa19.6■□□□□ 0.73
HLA-DPA1-245ENST00000463066 TTBK2Q6IQ55 1244 aa19.6■□□□□ 0.73
HLA-DPA1-245ENST00000463066 RALYLQ86SE5 291 aaKnown RBP19.6■□□□□ 0.73
HLA-DPA1-245ENST00000463066 IQCA1Q86XH1 822 aa19.6■□□□□ 0.73
HLA-DPA1-245ENST00000463066 GPRC5AQ8NFJ5 357 aa19.6■□□□□ 0.73
HLA-DPA1-245ENST00000463066 GMCL1Q96IK5 515 aa19.6■□□□□ 0.73
HLA-DPA1-245ENST00000463066 UBAC1Q9BSL1 405 aa19.6■□□□□ 0.73
HLA-DPA1-245ENST00000463066 PPP1R9AQ9ULJ8 1098 aa19.6■□□□□ 0.73
HLA-DPA1-245ENST00000463066 RABGAP1Q9Y3P9 1069 aa19.6■□□□□ 0.73
HLA-DPA1-245ENST00000463066 MYH4Q9Y623 1939 aa19.6■□□□□ 0.73
HLA-DPA1-245ENST00000463066 RLFQ13129 1914 aa19.59■□□□□ 0.73
HLA-DPA1-245ENST00000463066 FRMPD2Q68DX3 1309 aaPredicted RBP19.59■□□□□ 0.73
HLA-DPA1-245ENST00000463066 TMEM232C9JQI7 657 aa19.59■□□□□ 0.73
HLA-DPA1-245ENST00000463066 SLC1A4P43007 532 aa19.59■□□□□ 0.73
HLA-DPA1-245ENST00000463066 KIF22Q14807 665 aa19.59■□□□□ 0.73
HLA-DPA1-245ENST00000463066 LBX2Q6XYB7 198 aa19.59■□□□□ 0.73
HLA-DPA1-245ENST00000463066 DGKHQ86XP1 1220 aa19.59■□□□□ 0.73
HLA-DPA1-245ENST00000463066 ANKS1AQ92625 1134 aa19.59■□□□□ 0.73
HLA-DPA1-245ENST00000463066 TTC14Q96N46 770 aa19.59■□□□□ 0.73
HLA-DPA1-245ENST00000463066 SLF1Q9BQI6 1058 aa19.59■□□□□ 0.73
HLA-DPA1-245ENST00000463066 HOXC10Q9NYD6 342 aa19.59■□□□□ 0.73
HLA-DPA1-245ENST00000463066 FCGRTP55899 365 aa19.58■□□□□ 0.72
HLA-DPA1-245ENST00000463066 SNAP25P60880 206 aa19.58■□□□□ 0.72
HLA-DPA1-245ENST00000463066 CCDC96Q2M329 555 aa19.58■□□□□ 0.72
HLA-DPA1-245ENST00000463066 ADCK5Q3MIX3 580 aa19.58■□□□□ 0.72
HLA-DPA1-245ENST00000463066 GTF3C2Q8WUA4 911 aaPredicted RBP19.58■□□□□ 0.72
HLA-DPA1-245ENST00000463066 KIFC2Q96AC6 838 aa19.58■□□□□ 0.72
HLA-DPA1-245ENST00000463066 GPCPD1Q9NPB8 672 aa19.58■□□□□ 0.72
HLA-DPA1-245ENST00000463066 GABRQQ9UN88 632 aa19.58■□□□□ 0.72
HLA-DPA1-245ENST00000463066 VWA5AO00534 786 aa19.57■□□□□ 0.72
HLA-DPA1-245ENST00000463066 TNPO2O14787 897 aaKnown RBP19.57■□□□□ 0.72
HLA-DPA1-245ENST00000463066 IFIT3O14879 490 aaKnown RBP19.57■□□□□ 0.72
HLA-DPA1-245ENST00000463066 PRC1O43663 620 aa19.57■□□□□ 0.72
HLA-DPA1-245ENST00000463066 REC8O95072 547 aa19.57■□□□□ 0.72
HLA-DPA1-245ENST00000463066 HSPA4P34932 840 aa19.57■□□□□ 0.72
HLA-DPA1-245ENST00000463066 SLC16A2P36021 539 aa19.57■□□□□ 0.72
HLA-DPA1-245ENST00000463066 TMEM132BQ14DG7 1078 aa19.57■□□□□ 0.72
HLA-DPA1-245ENST00000463066 PNMA1Q8ND90 353 aa19.57■□□□□ 0.72
HLA-DPA1-245ENST00000463066 REPS2Q8NFH8 660 aa19.57■□□□□ 0.72
HLA-DPA1-245ENST00000463066 DCAF4Q8WV16 495 aa19.57■□□□□ 0.72
HLA-DPA1-245ENST00000463066 LRRC2Q9BYS8 371 aa19.57■□□□□ 0.72
HLA-DPA1-245ENST00000463066 KAT14Q9H8E8 782 aa19.57■□□□□ 0.72
HLA-DPA1-245ENST00000463066 ADAMTS5Q9UNA0 930 aa19.57■□□□□ 0.72
HLA-DPA1-245ENST00000463066 PTCH2Q9Y6C5 1203 aa19.57■□□□□ 0.72
HLA-DPA1-245ENST00000463066 MYPNQ86TC9 1320 aa19.56■□□□□ 0.72
HLA-DPA1-245ENST00000463066 GOLGA8HP0CJ92 632 aa19.56■□□□□ 0.72
HLA-DPA1-245ENST00000463066 PDHBP11177 359 aa19.56■□□□□ 0.72
HLA-DPA1-245ENST00000463066 CPA1P15085 419 aa19.56■□□□□ 0.72
HLA-DPA1-245ENST00000463066 NT5C2P49902 561 aa19.56■□□□□ 0.72
HLA-DPA1-245ENST00000463066 PRKCZQ05513 592 aa19.56■□□□□ 0.72
HLA-DPA1-245ENST00000463066 PLS1Q14651 629 aa19.56■□□□□ 0.72
HLA-DPA1-245ENST00000463066 CCDC178Q5BJE1 867 aa19.56■□□□□ 0.72
HLA-DPA1-245ENST00000463066 RNF20Q5VTR2 975 aa19.56■□□□□ 0.72
HLA-DPA1-245ENST00000463066 KCNB2Q92953 911 aa19.56■□□□□ 0.72
HLA-DPA1-245ENST00000463066 TCEANC2Q96MN5 208 aa19.56■□□□□ 0.72
HLA-DPA1-245ENST00000463066 MOV10L1Q9BXT6 1211 aaKnown RBP19.56■□□□□ 0.72
HLA-DPA1-245ENST00000463066 CPVLQ9H3G5 476 aa19.56■□□□□ 0.72
HLA-DPA1-245ENST00000463066 FEM1BQ9UK73 627 aa19.56■□□□□ 0.72
HLA-DPA1-245ENST00000463066 PTPN22Q9Y2R2 807 aa19.56■□□□□ 0.72
HLA-DPA1-245ENST00000463066 SNX14Q9Y5W7 946 aa19.56■□□□□ 0.72
HLA-DPA1-245ENST00000463066 SEC24BO95487 1268 aa19.55■□□□□ 0.72
HLA-DPA1-245ENST00000463066 TAL1P17542 331 aaPredicted RBP19.55■□□□□ 0.72
HLA-DPA1-245ENST00000463066 IKQ13123 557 aaPredicted RBP19.55■□□□□ 0.72
HLA-DPA1-245ENST00000463066 TMEM67Q5HYA8 995 aa19.55■□□□□ 0.72
HLA-DPA1-245ENST00000463066 IFIT1BQ5T764 474 aaKnown RBP19.55■□□□□ 0.72
HLA-DPA1-245ENST00000463066 FBXO46Q6PJ61 603 aaPredicted RBP19.55■□□□□ 0.72
HLA-DPA1-245ENST00000463066 IGDCC4Q8TDY8 1250 aa19.55■□□□□ 0.72
HLA-DPA1-245ENST00000463066 USP26Q9BXU7 913 aa19.55■□□□□ 0.72
HLA-DPA1-245ENST00000463066 SPATC1LQ9H0A9 340 aa19.55■□□□□ 0.72
HLA-DPA1-245ENST00000463066 SRRDQ9UH36 339 aa19.55■□□□□ 0.72
HLA-DPA1-245ENST00000463066 A0A0G2JMZ2 1700 aa19.54■□□□□ 0.72
HLA-DPA1-245ENST00000463066 SNHG28P0DPA3 235 aa19.54■□□□□ 0.72
HLA-DPA1-245ENST00000463066 ZNF543Q08ER8 600 aa19.54■□□□□ 0.72
HLA-DPA1-245ENST00000463066 TSGA10IPQ3SY00 556 aa19.54■□□□□ 0.72
HLA-DPA1-245ENST00000463066 WDR78Q5VTH9 848 aa19.54■□□□□ 0.72
HLA-DPA1-245ENST00000463066 PRPF38AQ8NAV1 312 aaKnown RBP19.54■□□□□ 0.72
HLA-DPA1-245ENST00000463066 NEK1Q96PY6 1258 aa19.54■□□□□ 0.72
HLA-DPA1-245ENST00000463066 ZNF214Q9UL59 606 aaPredicted RBP19.54■□□□□ 0.72
HLA-DPA1-245ENST00000463066 PRR12Q9ULL5 1215 aa19.54■□□□□ 0.72
HLA-DPA1-245ENST00000463066 PARP14Q460N5 1801 aa19.53■□□□□ 0.72
HLA-DPA1-245ENST00000463066 SLC4A3P48751 1232 aa19.53■□□□□ 0.72
HLA-DPA1-245ENST00000463066 FLT3LGP49771 235 aa19.53■□□□□ 0.72
HLA-DPA1-245ENST00000463066 WTAPQ15007 396 aa19.53■□□□□ 0.72
HLA-DPA1-245ENST00000463066 CPXCR1Q8N123 301 aa19.53■□□□□ 0.72
HLA-DPA1-245ENST00000463066 MB21D1Q8N884 522 aa19.53■□□□□ 0.72
HLA-DPA1-245ENST00000463066 ABHD8Q96I13 439 aa19.53■□□□□ 0.72
HLA-DPA1-245ENST00000463066 UBA5Q9GZZ9 404 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms