RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 PGK1P00558 417 aa18.99■□□□□ 0.63
SND1-203ENST00000463020 TMEM179Q6ZVK1 233 aa18.99■□□□□ 0.63
SND1-203ENST00000463020 RHPN1Q8TCX5 695 aa18.99■□□□□ 0.63
SND1-203ENST00000463020 TMX2Q9Y320 296 aa18.99■□□□□ 0.63
SND1-203ENST00000463020 TTC28Q96AY4 2481 aa18.99■□□□□ 0.63
SND1-203ENST00000463020 BAZ2AQ9UIF9 1905 aaKnown RBP18.98■□□□□ 0.63
SND1-203ENST00000463020 ICA1Q05084 483 aa18.98■□□□□ 0.63
SND1-203ENST00000463020 BCL11AQ9H165 835 aa18.98■□□□□ 0.63
SND1-203ENST00000463020 MROH8Q9H579 483 aa18.98■□□□□ 0.63
SND1-203ENST00000463020 VCPKMTQ9H867 229 aa18.98■□□□□ 0.63
SND1-203ENST00000463020 PHF24Q9UPV7 400 aa18.98■□□□□ 0.63
SND1-203ENST00000463020 SMCHD1A6NHR9 2005 aa18.98■□□□□ 0.63
SND1-203ENST00000463020 MBD4O95243 580 aa18.97■□□□□ 0.63
SND1-203ENST00000463020 IRX5P78411 483 aaPredicted RBP18.97■□□□□ 0.63
SND1-203ENST00000463020 C1orf53Q5VUE5 145 aa18.97■□□□□ 0.63
SND1-203ENST00000463020 SIRT2Q8IXJ6 389 aa18.97■□□□□ 0.63
SND1-203ENST00000463020 ABRAQ8N0Z2 381 aa18.97■□□□□ 0.63
SND1-203ENST00000463020 MB21D1Q8N884 522 aa18.97■□□□□ 0.63
SND1-203ENST00000463020 XPNPEP3Q9NQH7 507 aa18.97■□□□□ 0.63
SND1-203ENST00000463020 ADAMTS5Q9UNA0 930 aa18.97■□□□□ 0.63
SND1-203ENST00000463020 ZNF865P0CJ78 1059 aaPredicted RBP18.96■□□□□ 0.63
SND1-203ENST00000463020 SMAD3P84022 425 aaKnown RBP18.96■□□□□ 0.63
SND1-203ENST00000463020 ZNF792Q3KQV3 632 aa18.96■□□□□ 0.63
SND1-203ENST00000463020 USP38Q8NB14 1042 aa18.96■□□□□ 0.63
SND1-203ENST00000463020 REPS2Q8NFH8 660 aa18.96■□□□□ 0.63
SND1-203ENST00000463020 ZNFX1Q9P2E3 1918 aaKnown RBP18.96■□□□□ 0.63
SND1-203ENST00000463020 A0A1W2PQ45 241 aaPredicted RBP18.95■□□□□ 0.62
SND1-203ENST00000463020 A0A1W2PQY0 241 aa18.95■□□□□ 0.62
SND1-203ENST00000463020 FCER1AP12319 257 aa18.95■□□□□ 0.62
SND1-203ENST00000463020 EEF2P13639 858 aaKnown RBP18.95■□□□□ 0.62
SND1-203ENST00000463020 CDK8P49336 464 aa18.95■□□□□ 0.62
SND1-203ENST00000463020 TTF1Q15361 905 aaPredicted RBP18.95■□□□□ 0.62
SND1-203ENST00000463020 TMED8Q6PL24 325 aaPredicted RBP18.95■□□□□ 0.62
SND1-203ENST00000463020 ERC1Q8IUD2 1116 aa18.95■□□□□ 0.62
SND1-203ENST00000463020 MMP19Q99542 508 aa18.95■□□□□ 0.62
SND1-203ENST00000463020 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.95■□□□□ 0.62
SND1-203ENST00000463020 SWAP70Q9UH65 585 aa18.95■□□□□ 0.62
SND1-203ENST00000463020 ZNF214Q9UL59 606 aaPredicted RBP18.95■□□□□ 0.62
SND1-203ENST00000463020 MYH8P13535 1937 aa18.95■□□□□ 0.62
SND1-203ENST00000463020 MYADML2A6NDP7 307 aa18.94■□□□□ 0.62
SND1-203ENST00000463020 WDR46O15213 610 aaKnown RBP18.94■□□□□ 0.62
SND1-203ENST00000463020 PQBP1O60828 265 aaKnown RBP18.94■□□□□ 0.62
SND1-203ENST00000463020 CLTBP09497 229 aa18.94■□□□□ 0.62
SND1-203ENST00000463020 ADD2P35612 726 aa18.94■□□□□ 0.62
SND1-203ENST00000463020 C12orf60Q5U649 245 aa18.94■□□□□ 0.62
SND1-203ENST00000463020 NUP88Q99567 741 aaPredicted RBP18.94■□□□□ 0.62
SND1-203ENST00000463020 TINF2Q9BSI4 451 aa18.94■□□□□ 0.62
SND1-203ENST00000463020 ARHGEF10LQ9HCE6 1279 aa18.94■□□□□ 0.62
SND1-203ENST00000463020 REV3LO60673 3130 aa18.93■□□□□ 0.62
SND1-203ENST00000463020 PLXNA1Q9UIW2 1896 aa18.93■□□□□ 0.62
SND1-203ENST00000463020 USP17L12C9JPN9 530 aa18.93■□□□□ 0.62
SND1-203ENST00000463020 USP17L21D6R901 530 aa18.93■□□□□ 0.62
SND1-203ENST00000463020 VWA5AO00534 786 aa18.93■□□□□ 0.62
SND1-203ENST00000463020 ADCY6O43306 1168 aa18.93■□□□□ 0.62
SND1-203ENST00000463020 ADAMTS4O75173 837 aa18.93■□□□□ 0.62
SND1-203ENST00000463020 FAM83BQ5T0W9 1011 aa18.93■□□□□ 0.62
SND1-203ENST00000463020 C16orf86Q6ZW13 317 aa18.93■□□□□ 0.62
SND1-203ENST00000463020 RIOX2Q8IUF8 465 aa18.93■□□□□ 0.62
SND1-203ENST00000463020 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.93■□□□□ 0.62
SND1-203ENST00000463020 RNPC3Q96LT9 517 aaKnown RBP18.93■□□□□ 0.62
SND1-203ENST00000463020 BOLA2Q9H3K6 86 aa18.93■□□□□ 0.62
SND1-203ENST00000463020 CHD7Q9P2D1 2997 aa18.93■□□□□ 0.62
SND1-203ENST00000463020 ROBO3Q96MS0 1386 aa18.93■□□□□ 0.62
SND1-203ENST00000463020 KIAA0355O15063 1070 aa18.92■□□□□ 0.62
SND1-203ENST00000463020 RARBP10826 455 aa18.92■□□□□ 0.62
SND1-203ENST00000463020 FOSL2P15408 326 aa18.92■□□□□ 0.62
SND1-203ENST00000463020 FAAP100Q0VG06 881 aa18.92■□□□□ 0.62
SND1-203ENST00000463020 GRIN2CQ14957 1233 aa18.92■□□□□ 0.62
SND1-203ENST00000463020 PAG1Q9NWQ8 432 aa18.92■□□□□ 0.62
SND1-203ENST00000463020 SLC5A4Q9NY91 659 aa18.92■□□□□ 0.62
SND1-203ENST00000463020 PPP1R9AQ9ULJ8 1098 aa18.92■□□□□ 0.62
SND1-203ENST00000463020 RIPK3Q9Y572 518 aa18.92■□□□□ 0.62
SND1-203ENST00000463020 CTR9Q6PD62 1173 aa18.91■□□□□ 0.62
SND1-203ENST00000463020 PRDM6Q9NQX0 595 aa18.91■□□□□ 0.62
SND1-203ENST00000463020 TACC3Q9Y6A5 838 aa18.91■□□□□ 0.62
SND1-203ENST00000463020 GREB1LQ9C091 1923 aaPredicted RBP18.91■□□□□ 0.62
SND1-203ENST00000463020 ZBED9Q6R2W3 1325 aa18.91■□□□□ 0.62
SND1-203ENST00000463020 SYNRGQ9UMZ2 1314 aa18.91■□□□□ 0.62
SND1-203ENST00000463020 SLC25A27O95847 323 aa18.9■□□□□ 0.62
SND1-203ENST00000463020 SNAI1O95863 264 aaPredicted RBP18.9■□□□□ 0.62
SND1-203ENST00000463020 STAT3P40763 770 aa18.9■□□□□ 0.62
SND1-203ENST00000463020 CCSAPQ6IQ19 270 aaPredicted RBP18.9■□□□□ 0.62
SND1-203ENST00000463020 PUS7LQ9H0K6 701 aaKnown RBP18.9■□□□□ 0.62
SND1-203ENST00000463020 ATP8A2Q9NTI2 1148 aa18.9■□□□□ 0.62
SND1-203ENST00000463020 XIRP2A4UGR9 3374 aa18.9■□□□□ 0.62
SND1-203ENST00000463020 RAD21O60216 631 aa18.89■□□□□ 0.61
SND1-203ENST00000463020 IFIT2P09913 472 aaKnown RBP18.89■□□□□ 0.61
SND1-203ENST00000463020 ACLYP53396 1101 aa18.89■□□□□ 0.61
SND1-203ENST00000463020 KCTD2Q14681 263 aa18.89■□□□□ 0.61
SND1-203ENST00000463020 C16orf59Q7L2K0 433 aa18.89■□□□□ 0.61
SND1-203ENST00000463020 RNF180Q86T96 592 aa18.89■□□□□ 0.61
SND1-203ENST00000463020 STK11IPQ8N1F8 1099 aa18.89■□□□□ 0.61
SND1-203ENST00000463020 CLASRPQ8N2M8 674 aaKnown RBP18.89■□□□□ 0.61
SND1-203ENST00000463020 KIF1BPQ96EK5 621 aa18.89■□□□□ 0.61
SND1-203ENST00000463020 FGD4Q96M96 766 aa18.89■□□□□ 0.61
SND1-203ENST00000463020 SH2D4AQ9H788 454 aa18.89■□□□□ 0.61
SND1-203ENST00000463020 TMEM39AQ9NV64 488 aa18.89■□□□□ 0.61
SND1-203ENST00000463020 NRBP1Q9UHY1 535 aa18.89■□□□□ 0.61
SND1-203ENST00000463020 AKR1A1P14550 325 aa18.88■□□□□ 0.61
SND1-203ENST00000463020 RAG1P15918 1043 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms