RNA–Protein interactions for RNA: ENST00000462710.5

SRRM1-205, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 2,624 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-205ENST00000462710 SHROOM1Q2M3G4 852 aaPredicted RBP10.96□□□□□ -0.66
SRRM1-205ENST00000462710 SH3RF1Q7Z6J0 888 aa10.96□□□□□ -0.66
SRRM1-205ENST00000462710 PCSK9Q8NBP7 692 aaKnown RBP10.96□□□□□ -0.66
SRRM1-205ENST00000462710 MMP19Q99542 508 aa10.96□□□□□ -0.66
SRRM1-205ENST00000462710 C1QTNF1Q9BXJ1 281 aa10.96□□□□□ -0.66
SRRM1-205ENST00000462710 TLR3O15455 904 aaKnown RBP10.95□□□□□ -0.66
SRRM1-205ENST00000462710 GJA9P57773 515 aa10.95□□□□□ -0.66
SRRM1-205ENST00000462710 FAM9BQ8IZU0 186 aa10.95□□□□□ -0.66
SRRM1-205ENST00000462710 TSPYL2Q9H2G4 693 aaPredicted RBP10.95□□□□□ -0.66
SRRM1-205ENST00000462710 ATP8A2Q9NTI2 1148 aa10.95□□□□□ -0.66
SRRM1-205ENST00000462710 SAP30BPQ9UHR5 308 aaKnown RBP10.95□□□□□ -0.66
SRRM1-205ENST00000462710 A0A0U1RQG5 324 aaPredicted RBP10.95□□□□□ -0.66
SRRM1-205ENST00000462710 EPHB4P54760 987 aa10.95□□□□□ -0.66
SRRM1-205ENST00000462710 TMEM240Q5SV17 173 aa10.95□□□□□ -0.66
SRRM1-205ENST00000462710 TMEM199Q8N511 208 aa10.95□□□□□ -0.66
SRRM1-205ENST00000462710 TMEM39AQ9NV64 488 aa10.95□□□□□ -0.66
SRRM1-205ENST00000462710 DBNLQ9UJU6 430 aaKnown RBP10.95□□□□□ -0.66
SRRM1-205ENST00000462710 MYH7P12883 1935 aa10.94□□□□□ -0.66
SRRM1-205ENST00000462710 LOC102724159A0A0B4J2E5 919 aa10.94□□□□□ -0.66
SRRM1-205ENST00000462710 A0A1W2PRG0 241 aa10.94□□□□□ -0.66
SRRM1-205ENST00000462710 HOXD11P31277 338 aaPredicted RBP10.94□□□□□ -0.66
SRRM1-205ENST00000462710 ACLYP53396 1101 aa10.94□□□□□ -0.66
SRRM1-205ENST00000462710 OAZ1P54368 228 aa10.94□□□□□ -0.66
SRRM1-205ENST00000462710 GRIN2CQ14957 1233 aa10.94□□□□□ -0.66
SRRM1-205ENST00000462710 SEPT2Q15019 361 aa10.94□□□□□ -0.66
SRRM1-205ENST00000462710 RAB3GAP1Q15042 981 aa10.94□□□□□ -0.66
SRRM1-205ENST00000462710 PWP2Q15269 919 aaKnown RBP10.94□□□□□ -0.66
SRRM1-205ENST00000462710 HSP90AB4PQ58FF6 505 aa10.94□□□□□ -0.66
SRRM1-205ENST00000462710 FAM47AQ5JRC9 791 aa10.94□□□□□ -0.66
SRRM1-205ENST00000462710 SLC44A5Q8NCS7 719 aa10.94□□□□□ -0.66
SRRM1-205ENST00000462710 PRDM5Q9NQX1 630 aaPredicted RBP10.94□□□□□ -0.66
SRRM1-205ENST00000462710 Q9Y3F1 56 aa10.94□□□□□ -0.66
SRRM1-205ENST00000462710 MAGEB6P1A0A0J9YX57 407 aa10.94□□□□□ -0.66
SRRM1-205ENST00000462710 CD4P01730 458 aa10.94□□□□□ -0.66
SRRM1-205ENST00000462710 PFKMP08237 780 aa10.94□□□□□ -0.66
SRRM1-205ENST00000462710 AAK1Q2M2I8 961 aa10.94□□□□□ -0.66
SRRM1-205ENST00000462710 SIAH1Q8IUQ4 282 aa10.94□□□□□ -0.66
SRRM1-205ENST00000462710 IL23AQ9NPF7 189 aa10.94□□□□□ -0.66
SRRM1-205ENST00000462710 PPP1R9AQ9ULJ8 1098 aa10.94□□□□□ -0.66
SRRM1-205ENST00000462710 ITGB8P26012 769 aa10.93□□□□□ -0.66
SRRM1-205ENST00000462710 TCRBV5S4A2TA0A5A2 114 aa10.93□□□□□ -0.66
SRRM1-205ENST00000462710 ZNF316A6NFI3 1004 aaPredicted RBP10.93□□□□□ -0.66
SRRM1-205ENST00000462710 ARVCFO00192 962 aa10.93□□□□□ -0.66
SRRM1-205ENST00000462710 TRIM27P14373 513 aa10.93□□□□□ -0.66
SRRM1-205ENST00000462710 KCTD2Q14681 263 aa10.93□□□□□ -0.66
SRRM1-205ENST00000462710 TMEM132BQ14DG7 1078 aa10.93□□□□□ -0.66
SRRM1-205ENST00000462710 C16orf86Q6ZW13 317 aa10.93□□□□□ -0.66
SRRM1-205ENST00000462710 GOPCQ9HD26 462 aa10.93□□□□□ -0.66
SRRM1-205ENST00000462710 FBXO40Q9UH90 709 aa10.93□□□□□ -0.66
SRRM1-205ENST00000462710 MSRAQ9UJ68 235 aa10.93□□□□□ -0.66
SRRM1-205ENST00000462710 SYNRGQ9UMZ2 1314 aa10.93□□□□□ -0.66
SRRM1-205ENST00000462710 POLR3DP05423 398 aaPredicted RBP10.92□□□□□ -0.66
SRRM1-205ENST00000462710 PLCD1P51178 756 aa10.92□□□□□ -0.66
SRRM1-205ENST00000462710 WDR78Q5VTH9 848 aa10.92□□□□□ -0.66
SRRM1-205ENST00000462710 FAM161BQ96MY7 647 aa10.92□□□□□ -0.66
SRRM1-205ENST00000462710 MAF1Q9H063 256 aa10.92□□□□□ -0.66
SRRM1-205ENST00000462710 KANSL2Q9H9L4 492 aa10.92□□□□□ -0.66
SRRM1-205ENST00000462710 STARD7Q9NQZ5 370 aa10.92□□□□□ -0.66
SRRM1-205ENST00000462710 ZNF214Q9UL59 606 aaPredicted RBP10.92□□□□□ -0.66
SRRM1-205ENST00000462710 CNPY2Q9Y2B0 182 aa10.92□□□□□ -0.66
SRRM1-205ENST00000462710 PCDHA11Q9Y5I1 949 aa10.92□□□□□ -0.66
SRRM1-205ENST00000462710 TKFCQ3LXA3 575 aa10.92□□□□□ -0.66
SRRM1-205ENST00000462710 USP38Q8NB14 1042 aa10.92□□□□□ -0.66
SRRM1-205ENST00000462710 CHST13Q8NET6 341 aa10.92□□□□□ -0.66
SRRM1-205ENST00000462710 ATG4CQ96DT6 458 aa10.92□□□□□ -0.66
SRRM1-205ENST00000462710 FAM122AQ96E09 287 aa10.92□□□□□ -0.66
SRRM1-205ENST00000462710 SNRKQ9NRH2 765 aa10.92□□□□□ -0.66
SRRM1-205ENST00000462710 VWA5AO00534 786 aa10.91□□□□□ -0.66
SRRM1-205ENST00000462710 STAT3P40763 770 aa10.91□□□□□ -0.66
SRRM1-205ENST00000462710 GIMAP6Q6P9H5 292 aa10.91□□□□□ -0.66
SRRM1-205ENST00000462710 NCAPG2Q86XI2 1143 aa10.91□□□□□ -0.66
SRRM1-205ENST00000462710 FAM126BQ8IXS8 530 aa10.91□□□□□ -0.66
SRRM1-205ENST00000462710 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.91□□□□□ -0.662e-23■■■■□ 20.2
SRRM1-205ENST00000462710 SPC25Q9HBM1 224 aa10.91□□□□□ -0.66
SRRM1-205ENST00000462710 DCP1AQ9NPI6 582 aaPredicted RBP10.91□□□□□ -0.66
SRRM1-205ENST00000462710 NYAP2Q9P242 653 aa10.91□□□□□ -0.66
SRRM1-205ENST00000462710 COG5Q9UP83 839 aa10.91□□□□□ -0.66
SRRM1-205ENST00000462710 GBF1Q92538 1859 aa10.91□□□□□ -0.66
SRRM1-205ENST00000462710 RFC2P35250 354 aa10.91□□□□□ -0.66
SRRM1-205ENST00000462710 SBK1Q52WX2 424 aa10.91□□□□□ -0.66
SRRM1-205ENST00000462710 EAF2Q96CJ1 260 aaPredicted RBP10.91□□□□□ -0.66
SRRM1-205ENST00000462710 ABHD16BQ9H3Z7 469 aa10.91□□□□□ -0.66
SRRM1-205ENST00000462710 PLA2G6O60733 806 aa10.9□□□□□ -0.66
SRRM1-205ENST00000462710 FLOT1O75955 427 aa10.9□□□□□ -0.66
SRRM1-205ENST00000462710 PDE6AP16499 860 aa10.9□□□□□ -0.66
SRRM1-205ENST00000462710 ICA1Q05084 483 aa10.9□□□□□ -0.66
SRRM1-205ENST00000462710 ZYXQ15942 572 aaKnown RBP10.9□□□□□ -0.66
SRRM1-205ENST00000462710 KIAA1755Q5JYT7 1200 aa10.9□□□□□ -0.66
SRRM1-205ENST00000462710 C16orf59Q7L2K0 433 aa10.9□□□□□ -0.66
SRRM1-205ENST00000462710 ADAMTS19Q8TE59 1207 aa10.9□□□□□ -0.66
SRRM1-205ENST00000462710 CDCA7LQ96GN5 454 aa10.9□□□□□ -0.66
SRRM1-205ENST00000462710 GLT1D1Q96MS3 346 aa10.9□□□□□ -0.66
SRRM1-205ENST00000462710 PBX4Q9BYU1 374 aa10.9□□□□□ -0.66
SRRM1-205ENST00000462710 ERC2O15083 957 aa10.9□□□□□ -0.66
SRRM1-205ENST00000462710 SNAI1O95863 264 aaPredicted RBP10.9□□□□□ -0.66
SRRM1-205ENST00000462710 C12orf60Q5U649 245 aa10.9□□□□□ -0.66
SRRM1-205ENST00000462710 ZKSCAN2Q63HK3 967 aa10.9□□□□□ -0.66
SRRM1-205ENST00000462710 RPAP2Q8IXW5 612 aaPredicted RBP10.9□□□□□ -0.66
SRRM1-205ENST00000462710 PLIN4Q96Q06 1357 aa10.9□□□□□ -0.66
SRRM1-205ENST00000462710 TEX13BQ9BXU2 312 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms