RNA–Protein interactions for RNA: ENST00000462279.5

ERCC8-204, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 3,424 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-204ENST00000462279 MIEF2Q96C03 454 aa9.03□□□□□ -0.96
ERCC8-204ENST00000462279 RPGRIP1Q96KN7 1286 aa9.03□□□□□ -0.96
ERCC8-204ENST00000462279 RNPC3Q96LT9 517 aaKnown RBP9.03□□□□□ -0.96
ERCC8-204ENST00000462279 AMOTL2Q9Y2J4 779 aa9.03□□□□□ -0.96
ERCC8-204ENST00000462279 ESYT3A0FGR9 886 aa9.03□□□□□ -0.96
ERCC8-204ENST00000462279 ZPR1O75312 459 aa9.03□□□□□ -0.96
ERCC8-204ENST00000462279 PDE6BP35913 854 aa9.03□□□□□ -0.96
ERCC8-204ENST00000462279 CLNS1AP54105 237 aaKnown RBP9.03□□□□□ -0.96
ERCC8-204ENST00000462279 SF3A3Q12874 501 aaKnown RBP eCLIP9.03□□□□□ -0.96
ERCC8-204ENST00000462279 CCDC96Q2M329 555 aa9.03□□□□□ -0.96
ERCC8-204ENST00000462279 PAPD7Q5XG87 772 aaKnown RBP9.03□□□□□ -0.96
ERCC8-204ENST00000462279 TRIM22Q8IYM9 498 aa9.03□□□□□ -0.96
ERCC8-204ENST00000462279 CEP126Q9P2H0 1117 aa9.03□□□□□ -0.96
ERCC8-204ENST00000462279 BAZ2BQ9UIF8 2168 aaKnown RBP9.03□□□□□ -0.96
ERCC8-204ENST00000462279 SH2B2O14492 632 aaPredicted RBP9.03□□□□□ -0.96
ERCC8-204ENST00000462279 BACH1O14867 736 aa9.03□□□□□ -0.96
ERCC8-204ENST00000462279 SKAP2O75563 359 aaPredicted RBP9.03□□□□□ -0.96
ERCC8-204ENST00000462279 FSBPO95073 299 aa9.03□□□□□ -0.96
ERCC8-204ENST00000462279 MMP1P03956 469 aa9.03□□□□□ -0.96
ERCC8-204ENST00000462279 BRD2P25440 801 aaKnown RBP9.03□□□□□ -0.96
ERCC8-204ENST00000462279 GUCY2FP51841 1108 aa9.03□□□□□ -0.96
ERCC8-204ENST00000462279 HDLBPQ00341 1268 aaKnown RBP9.03□□□□□ -0.96
ERCC8-204ENST00000462279 NAA25Q14CX7 972 aa9.03□□□□□ -0.96
ERCC8-204ENST00000462279 AMOTL1Q8IY63 956 aa9.03□□□□□ -0.96
ERCC8-204ENST00000462279 ZIM3Q96PE6 472 aa9.03□□□□□ -0.96
ERCC8-204ENST00000462279 SRPRBQ9Y5M8 271 aaKnown RBP9.03□□□□□ -0.96
ERCC8-204ENST00000462279 GOLGA6L7A0A1B0GV03 622 aa9.02□□□□□ -0.96
ERCC8-204ENST00000462279 IDH1O75874 414 aaKnown RBP9.02□□□□□ -0.96
ERCC8-204ENST00000462279 TRIM21P19474 475 aaKnown RBP9.02□□□□□ -0.96
ERCC8-204ENST00000462279 NAP1L1P55209 391 aaKnown RBP9.02□□□□□ -0.96
ERCC8-204ENST00000462279 NTRK3Q16288 839 aa9.02□□□□□ -0.96
ERCC8-204ENST00000462279 TCP11X2Q5H9J9 407 aa9.02□□□□□ -0.96
ERCC8-204ENST00000462279 CFAP58Q5T655 872 aa9.02□□□□□ -0.96
ERCC8-204ENST00000462279 NELFBQ8WX92 580 aa9.02□□□□□ -0.96
ERCC8-204ENST00000462279 IP6K1Q92551 441 aa9.02□□□□□ -0.96
ERCC8-204ENST00000462279 CCDC43Q96MW1 224 aaKnown RBP9.02□□□□□ -0.96
ERCC8-204ENST00000462279 CARD10Q9BWT7 1032 aa9.02□□□□□ -0.96
ERCC8-204ENST00000462279 CCDC189A1A4V9 331 aa9.02□□□□□ -0.97
ERCC8-204ENST00000462279 TRIM49BA6NDI0 452 aa9.02□□□□□ -0.97
ERCC8-204ENST00000462279 PPP1R12BO60237 982 aaPredicted RBP9.02□□□□□ -0.97
ERCC8-204ENST00000462279 IL15P40933 162 aaPredicted RBP9.02□□□□□ -0.97
ERCC8-204ENST00000462279 KRT83P78385 493 aa9.02□□□□□ -0.97
ERCC8-204ENST00000462279 KIF5AQ12840 1032 aa9.02□□□□□ -0.97
ERCC8-204ENST00000462279 PAK1Q13153 545 aa9.02□□□□□ -0.97
ERCC8-204ENST00000462279 RABL6Q3YEC7 729 aaPredicted RBP9.02□□□□□ -0.97
ERCC8-204ENST00000462279 NAIF1Q69YI7 327 aaPredicted RBP9.02□□□□□ -0.97
ERCC8-204ENST00000462279 ZNF790Q6PG37 636 aa9.02□□□□□ -0.97
ERCC8-204ENST00000462279 CCDC121Q6ZUS5 278 aa9.02□□□□□ -0.97
ERCC8-204ENST00000462279 KRT26Q7Z3Y9 468 aa9.02□□□□□ -0.97
ERCC8-204ENST00000462279 EHBP1Q8NDI1 1231 aa9.02□□□□□ -0.97
ERCC8-204ENST00000462279 ZNF473Q8WTR7 871 aaKnown RBP9.02□□□□□ -0.97
ERCC8-204ENST00000462279 APPBP2Q92624 585 aa9.02□□□□□ -0.97
ERCC8-204ENST00000462279 SLC40A1Q9NP59 571 aa9.02□□□□□ -0.97
ERCC8-204ENST00000462279 ZNHIT6Q9NWK9 470 aaKnown RBP9.02□□□□□ -0.97
ERCC8-204ENST00000462279 ITIH6Q6UXX5 1313 aa9.02□□□□□ -0.97
ERCC8-204ENST00000462279 TSPOAP1O95153 1857 aa9.02□□□□□ -0.97
ERCC8-204ENST00000462279 CPDO75976 1380 aa9.02□□□□□ -0.97
ERCC8-204ENST00000462279 DDR1Q08345 913 aa9.02□□□□□ -0.97
ERCC8-204ENST00000462279 MAATS1Q7Z4T9 603 aa9.02□□□□□ -0.97
ERCC8-204ENST00000462279 ANKRD13CQ8N6S4 541 aa9.02□□□□□ -0.97
ERCC8-204ENST00000462279 SPATA20Q8TB22 786 aa9.02□□□□□ -0.97
ERCC8-204ENST00000462279 NOC3LQ8WTT2 800 aaKnown RBP9.02□□□□□ -0.97
ERCC8-204ENST00000462279 ZNF496Q96IT1 587 aaPredicted RBP9.02□□□□□ -0.97
ERCC8-204ENST00000462279 CCT8L2Q96SF2 557 aa9.02□□□□□ -0.97
ERCC8-204ENST00000462279 STRN4Q9NRL3 753 aa9.02□□□□□ -0.97
ERCC8-204ENST00000462279 FAM217BQ9NTX9 383 aaPredicted RBP9.02□□□□□ -0.97
ERCC8-204ENST00000462279 AGPAT5Q9NUQ2 364 aa9.02□□□□□ -0.97
ERCC8-204ENST00000462279 MCM8Q9UJA3 840 aa9.02□□□□□ -0.97
ERCC8-204ENST00000462279 CEP131Q9UPN4 1083 aa9.02□□□□□ -0.97
ERCC8-204ENST00000462279 LTN1O94822 1766 aa9.01□□□□□ -0.97
ERCC8-204ENST00000462279 TRIM75PA6NK02 468 aa9.01□□□□□ -0.97
ERCC8-204ENST00000462279 EPHB4P54760 987 aa9.01□□□□□ -0.97
ERCC8-204ENST00000462279 ZNF174Q15697 407 aa9.01□□□□□ -0.97
ERCC8-204ENST00000462279 NFRKBQ6P4R8 1299 aa9.01□□□□□ -0.97
ERCC8-204ENST00000462279 SPATA4Q8NEY3 305 aa9.01□□□□□ -0.97
ERCC8-204ENST00000462279 GSDMAQ96QA5 445 aa9.01□□□□□ -0.97
ERCC8-204ENST00000462279 GDAQ9Y2T3 454 aa9.01□□□□□ -0.97
ERCC8-204ENST00000462279 ADAMTSL3P82987 1691 aa9.01□□□□□ -0.97
ERCC8-204ENST00000462279 ZSCAN5CA6NGD5 496 aaPredicted RBP9.01□□□□□ -0.97
ERCC8-204ENST00000462279 EYA2O00167 538 aa9.01□□□□□ -0.97
ERCC8-204ENST00000462279 EZRP15311 586 aaKnown RBP9.01□□□□□ -0.97
ERCC8-204ENST00000462279 NR1D1P20393 614 aa9.01□□□□□ -0.97
ERCC8-204ENST00000462279 GBP2P32456 591 aaPredicted RBP9.01□□□□□ -0.97
ERCC8-204ENST00000462279 CYLC1P35663 651 aaPredicted RBP9.01□□□□□ -0.97
ERCC8-204ENST00000462279 RNASE9P60153 205 aaKnown RBP9.01□□□□□ -0.97
ERCC8-204ENST00000462279 CTDSPL2Q05D32 466 aa9.01□□□□□ -0.97
ERCC8-204ENST00000462279 SPAG1Q07617 926 aa9.01□□□□□ -0.97
ERCC8-204ENST00000462279 TRIM14Q14142 442 aa9.01□□□□□ -0.97
ERCC8-204ENST00000462279 SNCBQ16143 134 aa9.01□□□□□ -0.97
ERCC8-204ENST00000462279 AMOTQ4VCS5 1084 aa9.01□□□□□ -0.97
ERCC8-204ENST00000462279 C8orf74Q6P047 294 aa9.01□□□□□ -0.97
ERCC8-204ENST00000462279 WDR59Q6PJI9 974 aa9.01□□□□□ -0.97
ERCC8-204ENST00000462279 TBC1D31Q96DN5 1066 aa9.01□□□□□ -0.97
ERCC8-204ENST00000462279 XAGE2Q96GT9 111 aa9.01□□□□□ -0.97
ERCC8-204ENST00000462279 EPN3Q9H201 632 aa9.01□□□□□ -0.97
ERCC8-204ENST00000462279 LRWD1Q9UFC0 647 aa9.01□□□□□ -0.97
ERCC8-204ENST00000462279 LIMA1Q9UHB6 759 aaKnown RBP9.01□□□□□ -0.97
ERCC8-204ENST00000462279 NFU1Q9UMS0 254 aa9.01□□□□□ -0.97
ERCC8-204ENST00000462279 PTPRUQ92729 1446 aa9.01□□□□□ -0.97
ERCC8-204ENST00000462279 PPP1R37O75864 691 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms