RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 KBTBD13C9JR72 458 aa18.46■□□□□ 0.55
SF3A3-203ENST00000461869 MYCNP04198 464 aaPredicted RBP18.46■□□□□ 0.55
SF3A3-203ENST00000461869 ERCC3P19447 782 aa18.46■□□□□ 0.55
SF3A3-203ENST00000461869 MFAP1P55081 439 aaKnown RBP18.46■□□□□ 0.55
SF3A3-203ENST00000461869 EVX2Q03828 476 aa18.46■□□□□ 0.55
SF3A3-203ENST00000461869 SLC9C2Q5TAH2 1124 aa18.46■□□□□ 0.55
SF3A3-203ENST00000461869 ANO1Q5XXA6 986 aa18.46■□□□□ 0.55
SF3A3-203ENST00000461869 SLC39A5Q6ZMH5 540 aa18.46■□□□□ 0.55
SF3A3-203ENST00000461869 SHCBP1Q8NEM2 672 aa18.46■□□□□ 0.55
SF3A3-203ENST00000461869 RBM19Q9Y4C8 960 aaKnown RBP18.46■□□□□ 0.55
SF3A3-203ENST00000461869 SEPT4O43236 478 aa18.45■□□□□ 0.54
SF3A3-203ENST00000461869 COBLO75128 1261 aa18.45■□□□□ 0.54
SF3A3-203ENST00000461869 PDE6AP16499 860 aa18.45■□□□□ 0.54
SF3A3-203ENST00000461869 PLS1Q14651 629 aa18.45■□□□□ 0.54
SF3A3-203ENST00000461869 ZNF697Q5TEC3 545 aa18.45■□□□□ 0.54
SF3A3-203ENST00000461869 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.45■□□□□ 0.54
SF3A3-203ENST00000461869 MB21D1Q8N884 522 aa18.45■□□□□ 0.54
SF3A3-203ENST00000461869 KBTBD3Q8NAB2 608 aa18.45■□□□□ 0.54
SF3A3-203ENST00000461869 PRDM5Q9NQX1 630 aaPredicted RBP18.45■□□□□ 0.54
SF3A3-203ENST00000461869 SLC5A4Q9NY91 659 aa18.45■□□□□ 0.54
SF3A3-203ENST00000461869 RAD50Q92878 1312 aa18.45■□□□□ 0.54
SF3A3-203ENST00000461869 SHHQ15465 462 aa18.44■□□□□ 0.54
SF3A3-203ENST00000461869 KIAA1755Q5JYT7 1200 aa18.44■□□□□ 0.54
SF3A3-203ENST00000461869 PRAMEF19Q5SWL8 479 aa18.44■□□□□ 0.54
SF3A3-203ENST00000461869 TMEM179Q6ZVK1 233 aa18.44■□□□□ 0.54
SF3A3-203ENST00000461869 NCAPG2Q86XI2 1143 aa18.44■□□□□ 0.54
SF3A3-203ENST00000461869 SDR42E1Q8WUS8 393 aa18.44■□□□□ 0.54
SF3A3-203ENST00000461869 ESYT1Q9BSJ8 1104 aa18.44■□□□□ 0.54
SF3A3-203ENST00000461869 COL25A1Q9BXS0 654 aaPredicted RBP18.44■□□□□ 0.54
SF3A3-203ENST00000461869 MROH8Q9H579 483 aa18.44■□□□□ 0.54
SF3A3-203ENST00000461869 ZNF532Q9HCE3 1301 aa18.44■□□□□ 0.54
SF3A3-203ENST00000461869 GOLIM4O00461 696 aa18.43■□□□□ 0.54
SF3A3-203ENST00000461869 EPB41L2O43491 1005 aaKnown RBP18.43■□□□□ 0.54
SF3A3-203ENST00000461869 FLOT1O75955 427 aa18.43■□□□□ 0.54
SF3A3-203ENST00000461869 SEC24BO95487 1268 aa18.43■□□□□ 0.54
SF3A3-203ENST00000461869 CYP2D6P10635 497 aa18.43■□□□□ 0.54
SF3A3-203ENST00000461869 DSG3P32926 999 aa18.43■□□□□ 0.54
SF3A3-203ENST00000461869 TRIM60Q495X7 471 aa18.43■□□□□ 0.54
SF3A3-203ENST00000461869 SLC44A5Q8NCS7 719 aa18.43■□□□□ 0.54
SF3A3-203ENST00000461869 DCP1AQ9NPI6 582 aaPredicted RBP18.43■□□□□ 0.54
SF3A3-203ENST00000461869 SWAP70Q9UH65 585 aa18.43■□□□□ 0.54
SF3A3-203ENST00000461869 ZFYP08048 801 aaPredicted RBP18.42■□□□□ 0.54
SF3A3-203ENST00000461869 ADCYAP1R1P41586 468 aa18.42■□□□□ 0.54
SF3A3-203ENST00000461869 ABRAQ8N0Z2 381 aa18.42■□□□□ 0.54
SF3A3-203ENST00000461869 SPICE1Q8N0Z3 855 aa18.42■□□□□ 0.54
SF3A3-203ENST00000461869 LCORLQ8N3X6 602 aa18.42■□□□□ 0.54
SF3A3-203ENST00000461869 BADQ92934 168 aa18.42■□□□□ 0.54
SF3A3-203ENST00000461869 ARHGEF10LQ9HCE6 1279 aa18.42■□□□□ 0.54
SF3A3-203ENST00000461869 ZNF236Q9UL36 1845 aa18.42■□□□□ 0.54
SF3A3-203ENST00000461869 TCRBV5S4A2TA0A5A2 114 aa18.41■□□□□ 0.54
SF3A3-203ENST00000461869 FCER1AP12319 257 aa18.41■□□□□ 0.54
SF3A3-203ENST00000461869 ANP32AP39687 249 aaKnown RBP18.41■□□□□ 0.54
SF3A3-203ENST00000461869 SNX17Q15036 470 aa18.41■□□□□ 0.54
SF3A3-203ENST00000461869 LRRC41Q15345 812 aa18.41■□□□□ 0.54
SF3A3-203ENST00000461869 C9orf50Q5SZB4 431 aa18.41■□□□□ 0.54
SF3A3-203ENST00000461869 ZSCAN25Q6NSZ9 544 aa18.41■□□□□ 0.54
SF3A3-203ENST00000461869 SAMD1Q6SPF0 538 aaPredicted RBP18.41■□□□□ 0.54
SF3A3-203ENST00000461869 SIAH1Q8IUQ4 282 aa18.41■□□□□ 0.54
SF3A3-203ENST00000461869 FERMT2Q96AC1 680 aa18.41■□□□□ 0.54
SF3A3-203ENST00000461869 ATG4CQ96DT6 458 aa18.41■□□□□ 0.54
SF3A3-203ENST00000461869 DYNLL2Q96FJ2 89 aa18.41■□□□□ 0.54
SF3A3-203ENST00000461869 MAML3Q96JK9 1138 aa18.41■□□□□ 0.54
SF3A3-203ENST00000461869 TBC1D32Q96NH3 1257 aa18.41■□□□□ 0.54
SF3A3-203ENST00000461869 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.41■□□□□ 0.542e-7■■□□□ 12.7
SF3A3-203ENST00000461869 TMX2Q9Y320 296 aa18.41■□□□□ 0.54
SF3A3-203ENST00000461869 NAV1Q8NEY1 1877 aa18.41■□□□□ 0.54
SF3A3-203ENST00000461869 SGSM2O43147 1006 aa18.4■□□□□ 0.54
SF3A3-203ENST00000461869 AKR1B1P15121 316 aa18.4■□□□□ 0.54
SF3A3-203ENST00000461869 ICA1Q05084 483 aa18.4■□□□□ 0.54
SF3A3-203ENST00000461869 FAM47AQ5JRC9 791 aa18.4■□□□□ 0.54
SF3A3-203ENST00000461869 CLEC10AQ8IUN9 316 aa18.4■□□□□ 0.54
SF3A3-203ENST00000461869 CDX2Q99626 313 aaPredicted RBP18.4■□□□□ 0.54
SF3A3-203ENST00000461869 C22orf23Q9BZE7 217 aa18.4■□□□□ 0.54
SF3A3-203ENST00000461869 SH2D4AQ9H788 454 aa18.4■□□□□ 0.54
SF3A3-203ENST00000461869 VCPKMTQ9H867 229 aa18.4■□□□□ 0.54
SF3A3-203ENST00000461869 ARMT1Q9H993 441 aa18.4■□□□□ 0.54
SF3A3-203ENST00000461869 PDLIM7Q9NR12 457 aa18.4■□□□□ 0.54
SF3A3-203ENST00000461869 MYH7P12883 1935 aa18.4■□□□□ 0.54
SF3A3-203ENST00000461869 LTBP2Q14767 1821 aa18.39■□□□□ 0.54
SF3A3-203ENST00000461869 TMEM132BQ14DG7 1078 aa18.39■□□□□ 0.53
SF3A3-203ENST00000461869 CWC27Q6UX04 472 aaKnown RBP18.39■□□□□ 0.53
SF3A3-203ENST00000461869 KIAA1211Q6ZU35 1233 aa18.39■□□□□ 0.53
SF3A3-203ENST00000461869 SH3RF1Q7Z6J0 888 aa18.39■□□□□ 0.53
SF3A3-203ENST00000461869 SEMA6BQ9H3T3 888 aa18.39■□□□□ 0.53
SF3A3-203ENST00000461869 RLFQ13129 1914 aa18.39■□□□□ 0.53
SF3A3-203ENST00000461869 A0A0G2JMZ2 1700 aa18.38■□□□□ 0.53
SF3A3-203ENST00000461869 TRIM43BA6NCK2 446 aa18.38■□□□□ 0.53
SF3A3-203ENST00000461869 WDR46O15213 610 aaKnown RBP18.38■□□□□ 0.53
SF3A3-203ENST00000461869 SLC25A27O95847 323 aa18.38■□□□□ 0.53
SF3A3-203ENST00000461869 C1orf53Q5VUE5 145 aa18.38■□□□□ 0.53
SF3A3-203ENST00000461869 TRIM43Q96BQ3 446 aaPredicted RBP18.38■□□□□ 0.53
SF3A3-203ENST00000461869 CCDC17Q96LX7 622 aa18.38■□□□□ 0.53
SF3A3-203ENST00000461869 MMP19Q99542 508 aa18.38■□□□□ 0.53
SF3A3-203ENST00000461869 PRKAB2O43741 272 aa18.37■□□□□ 0.53
SF3A3-203ENST00000461869 RARBP10826 455 aa18.37■□□□□ 0.53
SF3A3-203ENST00000461869 MCCP23508 829 aa18.37■□□□□ 0.53
SF3A3-203ENST00000461869 RBM25P49756 843 aaKnown RBP18.37■□□□□ 0.53
SF3A3-203ENST00000461869 SMAD3P84022 425 aaKnown RBP18.37■□□□□ 0.53
SF3A3-203ENST00000461869 NMIQ13287 307 aaPredicted RBP18.37■□□□□ 0.53
SF3A3-203ENST00000461869 ANO2Q9NQ90 1003 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms