RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 ISCA1Q9BUE6 129 aa6.5□□□□□ -1.37
BRCA1-206ENST00000461574 SEC31BQ9NQW1 1179 aa6.5□□□□□ -1.37
BRCA1-206ENST00000461574 PRDM6Q9NQX0 595 aa6.5□□□□□ -1.37
BRCA1-206ENST00000461574 KIAA1024Q9UPX6 916 aa6.5□□□□□ -1.37
BRCA1-206ENST00000461574 MED23Q9ULK4 1368 aa6.49□□□□□ -1.37
BRCA1-206ENST00000461574 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-206ENST00000461574 WNT10BO00744 389 aa6.49□□□□□ -1.37
BRCA1-206ENST00000461574 ZBTB7BO15156 539 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-206ENST00000461574 DYRK3O43781 588 aa6.49□□□□□ -1.37
BRCA1-206ENST00000461574 PPP1R12BO60237 982 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-206ENST00000461574 PDE8AO60658 829 aa6.49□□□□□ -1.37
BRCA1-206ENST00000461574 NID1P14543 1247 aa6.49□□□□□ -1.37
BRCA1-206ENST00000461574 EN2P19622 333 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-206ENST00000461574 TRIM28Q13263 835 aaKnown RBP6.49□□□□□ -1.37
BRCA1-206ENST00000461574 ARHGEF6Q15052 776 aa6.49□□□□□ -1.37
BRCA1-206ENST00000461574 KRT24Q2M2I5 525 aa6.49□□□□□ -1.37
BRCA1-206ENST00000461574 SLC4A8Q2Y0W8 1093 aa6.49□□□□□ -1.37
BRCA1-206ENST00000461574 SLC9C1Q4G0N8 1177 aa6.49□□□□□ -1.37
BRCA1-206ENST00000461574 NBPF11Q86T75 865 aa6.49□□□□□ -1.37
BRCA1-206ENST00000461574 ZBTB38Q8NAP3 1195 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-206ENST00000461574 TPCN2Q8NHX9 752 aa6.49□□□□□ -1.37
BRCA1-206ENST00000461574 CD99L2Q8TCZ2 262 aa6.49□□□□□ -1.37
BRCA1-206ENST00000461574 GMLQ99445 158 aa6.49□□□□□ -1.37
BRCA1-206ENST00000461574 CDC5LQ99459 802 aaKnown RBP6.49□□□□□ -1.37
BRCA1-206ENST00000461574 MXD3Q9BW11 206 aa6.49□□□□□ -1.37
BRCA1-206ENST00000461574 KRTAP9-2Q9BYQ4 174 aa6.49□□□□□ -1.37
BRCA1-206ENST00000461574 R3HDMLQ9H3Y0 253 aa6.49□□□□□ -1.37
BRCA1-206ENST00000461574 EFCC1Q9HA90 598 aa6.49□□□□□ -1.37
BRCA1-206ENST00000461574 BRD7Q9NPI1 651 aa6.49□□□□□ -1.37
BRCA1-206ENST00000461574 HYPKQ9NX55 129 aa6.49□□□□□ -1.37
BRCA1-206ENST00000461574 PTPN22Q9Y2R2 807 aa6.49□□□□□ -1.37
BRCA1-206ENST00000461574 HCN4Q9Y3Q4 1203 aa6.49□□□□□ -1.37
BRCA1-206ENST00000461574 OTOFQ9HC10 1997 aa6.49□□□□□ -1.37
BRCA1-206ENST00000461574 TRIOBPQ9H2D6 2365 aa6.49□□□□□ -1.37
BRCA1-206ENST00000461574 SZT2Q5T011 3432 aa6.48□□□□□ -1.37
BRCA1-206ENST00000461574 MYO1BO43795 1136 aa6.48□□□□□ -1.37
BRCA1-206ENST00000461574 ZBTB48P10074 688 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-206ENST00000461574 TMPOP42166 694 aaKnown RBP6.48□□□□□ -1.37
BRCA1-206ENST00000461574 SP3Q02447 781 aa6.48□□□□□ -1.37
BRCA1-206ENST00000461574 DACT2Q5SW24 774 aa6.48□□□□□ -1.37
BRCA1-206ENST00000461574 STRIP1Q5VSL9 837 aa6.48□□□□□ -1.37
BRCA1-206ENST00000461574 C20orf204Q6ZNR8 217 aa6.48□□□□□ -1.37
BRCA1-206ENST00000461574 KIAA0825Q8IV33 1275 aa6.48□□□□□ -1.37
BRCA1-206ENST00000461574 ZNF280CQ8ND82 737 aa6.48□□□□□ -1.37
BRCA1-206ENST00000461574 POM121Q96HA1 1249 aa6.48□□□□□ -1.37
BRCA1-206ENST00000461574 WNK4Q96J92 1243 aa6.48□□□□□ -1.37
BRCA1-206ENST00000461574 CEP63Q96MT8 703 aa6.48□□□□□ -1.37
BRCA1-206ENST00000461574 MYD88Q99836 296 aa6.48□□□□□ -1.37
BRCA1-206ENST00000461574 TSPAN10Q9H1Z9 355 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-206ENST00000461574 FZD1Q9UP38 647 aa6.48□□□□□ -1.37
BRCA1-206ENST00000461574 COL6A3P12111 3177 aa6.48□□□□□ -1.37
BRCA1-206ENST00000461574 RANBP2P49792 3224 aaKnown RBP6.47□□□□□ -1.37
BRCA1-206ENST00000461574 SCO2A0A1W2PP80 73 aa6.47□□□□□ -1.37
BRCA1-206ENST00000461574 SFI1A8K8P3 1242 aa6.47□□□□□ -1.37
BRCA1-206ENST00000461574 IGF2BP3O00425 579 aaKnown RBP eCLIP6.47□□□□□ -1.37
BRCA1-206ENST00000461574 WDHD1O75717 1129 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-206ENST00000461574 HOXB7P09629 217 aa6.47□□□□□ -1.37
BRCA1-206ENST00000461574 KCNJ4P48050 445 aa6.47□□□□□ -1.37
BRCA1-206ENST00000461574 MMP14P50281 582 aa6.47□□□□□ -1.37
BRCA1-206ENST00000461574 PSMA6P60900 246 aaKnown RBP6.47□□□□□ -1.37
BRCA1-206ENST00000461574 CRHR2Q13324 411 aa6.47□□□□□ -1.37
BRCA1-206ENST00000461574 DLGAP5Q15398 846 aa6.47□□□□□ -1.37
BRCA1-206ENST00000461574 LDLRAD1Q5T700 205 aa6.47□□□□□ -1.37
BRCA1-206ENST00000461574 C1orf53Q5VUE5 145 aa6.47□□□□□ -1.37
BRCA1-206ENST00000461574 CCDC102BQ68D86 513 aa6.47□□□□□ -1.37
BRCA1-206ENST00000461574 TTLL5Q6EMB2 1281 aa6.47□□□□□ -1.37
BRCA1-206ENST00000461574 ARMC5Q96C12 935 aa6.47□□□□□ -1.37
BRCA1-206ENST00000461574 PHACTR1Q9C0D0 580 aa6.47□□□□□ -1.37
BRCA1-206ENST00000461574 COA1Q9GZY4 146 aa6.47□□□□□ -1.37
BRCA1-206ENST00000461574 VEZTQ9HBM0 779 aa6.47□□□□□ -1.37
BRCA1-206ENST00000461574 CWC25Q9NXE8 425 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-206ENST00000461574 DDX58O95786 925 aaKnown RBP6.46□□□□□ -1.38
BRCA1-206ENST00000461574 PCCAP05165 728 aaPredicted RBP6.46□□□□□ -1.38
BRCA1-206ENST00000461574 IGHMBP2P38935 993 aaKnown RBP6.46□□□□□ -1.38
BRCA1-206ENST00000461574 IREB2P48200 963 aaKnown RBP6.46□□□□□ -1.38
BRCA1-206ENST00000461574 CCT4P50991 539 aaKnown RBP6.46□□□□□ -1.38
BRCA1-206ENST00000461574 CTSWP56202 376 aa6.46□□□□□ -1.38
BRCA1-206ENST00000461574 CLDN10P78369 228 aa6.46□□□□□ -1.38
BRCA1-206ENST00000461574 TYRO3Q06418 890 aa6.46□□□□□ -1.38
BRCA1-206ENST00000461574 KIF22Q14807 665 aa6.46□□□□□ -1.38
BRCA1-206ENST00000461574 SUPT20HL1Q3ZLR7 823 aa6.46□□□□□ -1.38
BRCA1-206ENST00000461574 DUSP27Q5VZP5 1158 aa6.46□□□□□ -1.38
BRCA1-206ENST00000461574 TRIM50Q86XT4 487 aa6.46□□□□□ -1.38
BRCA1-206ENST00000461574 CCDC146Q8IYE0 955 aa6.46□□□□□ -1.38
BRCA1-206ENST00000461574 CCDC191Q8NCU4 936 aa6.46□□□□□ -1.38
BRCA1-206ENST00000461574 SLC17A8Q8NDX2 589 aa6.46□□□□□ -1.38
BRCA1-206ENST00000461574 ADAMTS19Q8TE59 1207 aa6.46□□□□□ -1.38
BRCA1-206ENST00000461574 JARID2Q92833 1246 aaPredicted RBP6.46□□□□□ -1.38
BRCA1-206ENST00000461574 ZNF333Q96JL9 665 aa6.46□□□□□ -1.38
BRCA1-206ENST00000461574 CLMNQ96JQ2 1002 aa6.46□□□□□ -1.38
BRCA1-206ENST00000461574 NACC1Q96RE7 527 aa6.46□□□□□ -1.38
BRCA1-206ENST00000461574 DEFB129Q9H1M3 183 aa6.46□□□□□ -1.38
BRCA1-206ENST00000461574 KCNH4Q9UQ05 1017 aa6.46□□□□□ -1.38
BRCA1-206ENST00000461574 PPP2R3BQ9Y5P8 575 aa6.46□□□□□ -1.38
BRCA1-206ENST00000461574 SSC5DA1L4H1 1573 aa6.45□□□□□ -1.38
BRCA1-206ENST00000461574 A0A1B0GUL6 1792 aa6.45□□□□□ -1.38
BRCA1-206ENST00000461574 KRTAP9-6A0A140TA67 174 aa6.45□□□□□ -1.38
BRCA1-206ENST00000461574 CLRN2A0PK11 232 aa6.45□□□□□ -1.38
BRCA1-206ENST00000461574 F8W031 263 aaPredicted RBP6.45□□□□□ -1.38
BRCA1-206ENST00000461574 H0YGN5 161 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms