RNA–Protein interactions for RNA: ENST00000461350.5

COPS7B-217, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 3,299 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-217ENST00000461350 TSPY8P0CW00 308 aa12.79□□□□□ -0.36
COPS7B-217ENST00000461350 H2AFXP16104 143 aaPredicted RBP12.79□□□□□ -0.36
COPS7B-217ENST00000461350 POLD1P28340 1107 aa12.79□□□□□ -0.36
COPS7B-217ENST00000461350 TCP10Q12799 353 aa12.79□□□□□ -0.36
COPS7B-217ENST00000461350 TROAPQ12815 778 aa12.79□□□□□ -0.36
COPS7B-217ENST00000461350 CERS3Q8IU89 383 aa12.79□□□□□ -0.36
COPS7B-217ENST00000461350 ZFPM1Q8IX07 1006 aa12.79□□□□□ -0.36
COPS7B-217ENST00000461350 LARGE2Q8N3Y3 721 aa12.79□□□□□ -0.36
COPS7B-217ENST00000461350 ECM29Q5VYK3 1845 aa12.78□□□□□ -0.36
COPS7B-217ENST00000461350 ZNF202O95125 648 aa12.78□□□□□ -0.36
COPS7B-217ENST00000461350 IFNAR1P17181 557 aa12.78□□□□□ -0.36
COPS7B-217ENST00000461350 MTFR1LQ9H019 292 aa12.78□□□□□ -0.36
COPS7B-217ENST00000461350 FAM53CQ9NYF3 392 aa12.78□□□□□ -0.36
COPS7B-217ENST00000461350 ROBO3Q96MS0 1386 aa12.78□□□□□ -0.36
COPS7B-217ENST00000461350 NLRP12P59046 1061 aa12.78□□□□□ -0.36
COPS7B-217ENST00000461350 FANCCQ00597 558 aa12.78□□□□□ -0.36
COPS7B-217ENST00000461350 HHIPL2Q6UWX4 724 aa12.78□□□□□ -0.36
COPS7B-217ENST00000461350 SUPT20HQ8NEM7 779 aa12.78□□□□□ -0.36
COPS7B-217ENST00000461350 ARGLU1Q9NWB6 273 aaPredicted RBP12.78□□□□□ -0.36
COPS7B-217ENST00000461350 DDX60LQ5H9U9 1706 aaKnown RBP12.78□□□□□ -0.36
COPS7B-217ENST00000461350 COL4A5P29400 1685 aa12.78□□□□□ -0.36
COPS7B-217ENST00000461350 URI1O94763 535 aaPredicted RBP12.77□□□□□ -0.36
COPS7B-217ENST00000461350 FMNL1O95466 1100 aaPredicted RBP12.77□□□□□ -0.36
COPS7B-217ENST00000461350 ATP1A3P13637 1013 aa12.77□□□□□ -0.36
COPS7B-217ENST00000461350 ETF1P62495 437 aaKnown RBP12.77□□□□□ -0.36
COPS7B-217ENST00000461350 KRT40Q6A162 431 aa12.77□□□□□ -0.36
COPS7B-217ENST00000461350 RTKN2Q8IZC4 609 aa12.77□□□□□ -0.36
COPS7B-217ENST00000461350 CRACR2BQ8N4Y2 399 aaPredicted RBP12.77□□□□□ -0.36
COPS7B-217ENST00000461350 STX8Q9UNK0 236 aa12.77□□□□□ -0.36
COPS7B-217ENST00000461350 SERPINC1P01008 464 aa12.77□□□□□ -0.37
COPS7B-217ENST00000461350 TMCO3Q6UWJ1 677 aa12.77□□□□□ -0.37
COPS7B-217ENST00000461350 C16orf86Q6ZW13 317 aa12.77□□□□□ -0.37
COPS7B-217ENST00000461350 RASGRP2Q7LDG7 609 aa12.77□□□□□ -0.37
COPS7B-217ENST00000461350 FAM177A1Q8N128 213 aaPredicted RBP12.77□□□□□ -0.37
COPS7B-217ENST00000461350 PIM2Q9P1W9 311 aa12.77□□□□□ -0.37
COPS7B-217ENST00000461350 KCNJ14Q9UNX9 436 aa12.77□□□□□ -0.37
COPS7B-217ENST00000461350 ZBTB12Q9Y330 459 aaPredicted RBP12.77□□□□□ -0.37
COPS7B-217ENST00000461350 YEATS4O95619 227 aa12.77□□□□□ -0.37
COPS7B-217ENST00000461350 MARCKSP29966 332 aaPredicted RBP12.77□□□□□ -0.37
COPS7B-217ENST00000461350 DHX8Q14562 1220 aaKnown RBP12.77□□□□□ -0.37
COPS7B-217ENST00000461350 CFAP100Q494V2 611 aa12.77□□□□□ -0.37
COPS7B-217ENST00000461350 MYSM1Q5VVJ2 828 aa12.77□□□□□ -0.37
COPS7B-217ENST00000461350 TIGD1Q96MW7 591 aa12.77□□□□□ -0.37
COPS7B-217ENST00000461350 BPIFA3Q9BQP9 254 aa12.77□□□□□ -0.37
COPS7B-217ENST00000461350 FOCADQ5VW36 1801 aa12.76□□□□□ -0.37
COPS7B-217ENST00000461350 CCDC196A0A1B0GTZ2 297 aa12.76□□□□□ -0.37
COPS7B-217ENST00000461350 CCP110O43303 1012 aa12.76□□□□□ -0.37
COPS7B-217ENST00000461350 PNMA6AP0CW24 399 aaPredicted RBP12.76□□□□□ -0.37
COPS7B-217ENST00000461350 TRIM22Q8IYM9 498 aa12.76□□□□□ -0.37
COPS7B-217ENST00000461350 ZDHHC15Q96MV8 337 aa12.76□□□□□ -0.37
COPS7B-217ENST00000461350 FHOD1Q9Y613 1164 aa12.76□□□□□ -0.37
COPS7B-217ENST00000461350 ZNF646O15015 1829 aaPredicted RBP12.76□□□□□ -0.37
COPS7B-217ENST00000461350 NID2Q14112 1375 aa12.76□□□□□ -0.37
COPS7B-217ENST00000461350 MYH6P13533 1939 aa12.76□□□□□ -0.37
COPS7B-217ENST00000461350 FAM196BA6NMK8 535 aa12.76□□□□□ -0.37
COPS7B-217ENST00000461350 PFKFB1P16118 471 aa12.76□□□□□ -0.37
COPS7B-217ENST00000461350 UBASH3AP57075 661 aa12.76□□□□□ -0.37
COPS7B-217ENST00000461350 KIF23Q02241 960 aaPredicted RBP12.76□□□□□ -0.37
COPS7B-217ENST00000461350 KAT14Q9H8E8 782 aa12.76□□□□□ -0.37
COPS7B-217ENST00000461350 POLR3EQ9NVU0 708 aa12.76□□□□□ -0.37
COPS7B-217ENST00000461350 MYH15Q9Y2K3 1946 aa12.76□□□□□ -0.37
COPS7B-217ENST00000461350 POLR3GO15318 223 aaPredicted RBP12.75□□□□□ -0.37
COPS7B-217ENST00000461350 CDK11BP21127 795 aaKnown RBP12.75□□□□□ -0.37
COPS7B-217ENST00000461350 NCAPHQ15003 741 aa12.75□□□□□ -0.37
COPS7B-217ENST00000461350 CLEC10AQ8IUN9 316 aa12.75□□□□□ -0.37
COPS7B-217ENST00000461350 PNMA1Q8ND90 353 aa12.75□□□□□ -0.37
COPS7B-217ENST00000461350 TDRD3Q9H7E2 651 aaKnown RBP12.75□□□□□ -0.37
COPS7B-217ENST00000461350 V9GY48 417 aaPredicted RBP12.75□□□□□ -0.37
COPS7B-217ENST00000461350 KIF13BQ9NQT8 1826 aa12.75□□□□□ -0.37
COPS7B-217ENST00000461350 PSMD14O00487 310 aa12.75□□□□□ -0.37
COPS7B-217ENST00000461350 TUBB4AP04350 444 aa12.75□□□□□ -0.37
COPS7B-217ENST00000461350 KCNJ6P48051 423 aa12.75□□□□□ -0.37
COPS7B-217ENST00000461350 GOLGA8FQ08AF8 430 aa12.75□□□□□ -0.37
COPS7B-217ENST00000461350 GOLGA8DPQ0D2H9 430 aa12.75□□□□□ -0.37
COPS7B-217ENST00000461350 PTPN21Q16825 1174 aa12.75□□□□□ -0.37
COPS7B-217ENST00000461350 UPF1Q92900 1129 aaKnown RBP eCLIP12.75□□□□□ -0.371e-6■■□□□ 13.9
COPS7B-217ENST00000461350 PSMD1Q99460 953 aa12.75□□□□□ -0.37
COPS7B-217ENST00000461350 CALCOCO1Q9P1Z2 691 aa12.75□□□□□ -0.37
COPS7B-217ENST00000461350 TRIM29Q14134 588 aa12.75□□□□□ -0.37
COPS7B-217ENST00000461350 DALRD3Q5D0E6 543 aaKnown RBP12.75□□□□□ -0.37
COPS7B-217ENST00000461350 ANO1Q5XXA6 986 aa12.75□□□□□ -0.37
COPS7B-217ENST00000461350 BRAPQ7Z569 592 aa12.75□□□□□ -0.37
COPS7B-217ENST00000461350 SRBD1Q8N5C6 995 aaKnown RBP12.75□□□□□ -0.37
COPS7B-217ENST00000461350 CTCFLQ8NI51 663 aaPredicted RBP12.75□□□□□ -0.37
COPS7B-217ENST00000461350 BBXQ8WY36 941 aaPredicted RBP12.75□□□□□ -0.37
COPS7B-217ENST00000461350 CARD6Q9BX69 1037 aa12.75□□□□□ -0.37
COPS7B-217ENST00000461350 DDAH1O94760 285 aa12.74□□□□□ -0.37
COPS7B-217ENST00000461350 EIF6P56537 245 aaKnown RBP12.74□□□□□ -0.37
COPS7B-217ENST00000461350 TGFB2P61812 414 aa12.74□□□□□ -0.37
COPS7B-217ENST00000461350 FUT2Q10981 343 aa12.74□□□□□ -0.37
COPS7B-217ENST00000461350 GNL2Q13823 731 aaKnown RBP12.74□□□□□ -0.37
COPS7B-217ENST00000461350 STAG2Q8N3U4 1231 aa12.74□□□□□ -0.37
COPS7B-217ENST00000461350 PRMT6Q96LA8 375 aaPredicted RBP12.74□□□□□ -0.37
COPS7B-217ENST00000461350 TMEM47Q9BQJ4 181 aa12.74□□□□□ -0.37
COPS7B-217ENST00000461350 STK36Q9NRP7 1315 aa12.74□□□□□ -0.37
COPS7B-217ENST00000461350 SYKP43405 635 aa12.74□□□□□ -0.37
COPS7B-217ENST00000461350 RCAN1P53805 252 aa12.74□□□□□ -0.37
COPS7B-217ENST00000461350 TMTC3Q6ZXV5 915 aa12.74□□□□□ -0.37
COPS7B-217ENST00000461350 ZSCAN29Q8IWY8 852 aaPredicted RBP12.74□□□□□ -0.37
COPS7B-217ENST00000461350 SHISA4Q96DD7 197 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms